Magnesium in PDB 6psu: Escherichia Coli Rna Polymerase Promoter Unwinding Intermediate (TRPI2) with Trar and Rpst P2 Promoter

Enzymatic activity of Escherichia Coli Rna Polymerase Promoter Unwinding Intermediate (TRPI2) with Trar and Rpst P2 Promoter

All present enzymatic activity of Escherichia Coli Rna Polymerase Promoter Unwinding Intermediate (TRPI2) with Trar and Rpst P2 Promoter:
2.7.7.6;

Other elements in 6psu:

The structure of Escherichia Coli Rna Polymerase Promoter Unwinding Intermediate (TRPI2) with Trar and Rpst P2 Promoter also contains other interesting chemical elements:

Zinc

(Zn)

3 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Escherichia Coli Rna Polymerase Promoter Unwinding Intermediate (TRPI2) with Trar and Rpst P2 Promoter (pdb code 6psu). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Escherichia Coli Rna Polymerase Promoter Unwinding Intermediate (TRPI2) with Trar and Rpst P2 Promoter, PDB code: 6psu:

Magnesium binding site 1 out of 1 in 6psu

Go back to

Magnesium Binding Sites List in 6psu

Magnesium binding site 1 out of 1 in the Escherichia Coli Rna Polymerase Promoter Unwinding Intermediate (TRPI2) with Trar and Rpst P2 Promoter

Mono view

Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Escherichia Coli Rna Polymerase Promoter Unwinding Intermediate (TRPI2) with Trar and Rpst P2 Promoter within 5.0Å range:

probe	atom	residue	distance (Å)	B	Occ
J:Mg1501 b:27.8 occ:1.00	OD2	J:ASP464	2.0	10.2	1.0
	OD1	J:ASP460	2.3	10.5	1.0
	CG	J:ASP464	2.7	10.2	1.0
	OD1	J:ASP464	2.8	10.2	1.0
	OD1	J:ASP462	3.0	6.4	1.0
	CG	J:ASP460	3.4	10.5	1.0
	NH2	J:ARG425	3.6	12.5	1.0
	OD2	J:ASP462	3.8	6.4	1.0
	CG	J:ASP462	3.8	6.4	1.0
	OD2	J:ASP460	3.9	10.5	1.0
	N	J:ASP460	4.1	10.5	1.0
	CB	J:ASP464	4.2	10.2	1.0
	NH1	J:ARG425	4.3	12.5	1.0
	CZ	J:ARG425	4.4	12.5	1.0
	CB	J:ASP460	4.6	10.5	1.0
	O	J:ASP460	4.6	10.5	1.0
	CA	J:ASP460	4.7	10.5	1.0
	C	J:ASP460	4.8	10.5	1.0
	CA	J:ALA459	4.8	9.8	1.0
	O	N:SER2	4.9	26.7	1.0
	C	N:SER2	4.9	26.7	1.0
	C	J:ALA459	5.0	9.8	1.0

Reference:

J.Chen, C.Chiu, S.Gopalkrishnan, A.Y.Chen, P.D.B.Olinares, R.M.Saecker, J.T.Winkelman, M.F.Maloney, B.T.Chait, W.Ross, R.L.Gourse, E.A.Campbell, S.A.Darst. Stepwise Promoter Melting By Bacterial Rna Polymerase. Mol.Cell 2020.
ISSN: ISSN 1097-2765
PubMed: 32160514
DOI: 10.1016/J.MOLCEL.2020.02.017

Page generated: Tue Oct 1 15:18:13 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW

	© Copyright 2008-2020 by atomistry.com
Home \| Site Map \| Copyright \| Contact us \| Privacy