Atomistry » Magnesium » PDB 6pry-6q57 » 6psv
Atomistry »
  Magnesium »
    PDB 6pry-6q57 »
      6psv »

Magnesium in PDB 6psv: Escherichia Coli Rna Polymerase Promoter Unwinding Intermediate (Tprerpo) with Trar and Rpst P2 Promoter

Enzymatic activity of Escherichia Coli Rna Polymerase Promoter Unwinding Intermediate (Tprerpo) with Trar and Rpst P2 Promoter

All present enzymatic activity of Escherichia Coli Rna Polymerase Promoter Unwinding Intermediate (Tprerpo) with Trar and Rpst P2 Promoter:
2.7.7.6;

Other elements in 6psv:

The structure of Escherichia Coli Rna Polymerase Promoter Unwinding Intermediate (Tprerpo) with Trar and Rpst P2 Promoter also contains other interesting chemical elements:

Zinc (Zn) 3 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Escherichia Coli Rna Polymerase Promoter Unwinding Intermediate (Tprerpo) with Trar and Rpst P2 Promoter (pdb code 6psv). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Escherichia Coli Rna Polymerase Promoter Unwinding Intermediate (Tprerpo) with Trar and Rpst P2 Promoter, PDB code: 6psv:

Magnesium binding site 1 out of 1 in 6psv

Go back to Magnesium Binding Sites List in 6psv
Magnesium binding site 1 out of 1 in the Escherichia Coli Rna Polymerase Promoter Unwinding Intermediate (Tprerpo) with Trar and Rpst P2 Promoter


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Escherichia Coli Rna Polymerase Promoter Unwinding Intermediate (Tprerpo) with Trar and Rpst P2 Promoter within 5.0Å range:
probe atom residue distance (Å) B Occ
J:Mg1501

b:19.5
occ:1.00
OD1 J:ASP462 2.0 11.5 1.0
OD1 J:ASP464 2.5 11.1 1.0
CG J:ASP462 2.6 11.5 1.0
OD2 J:ASP462 2.6 11.5 1.0
CG J:ASP464 3.6 11.1 1.0
CB J:ASP462 4.0 11.5 1.0
OD1 J:ASP460 4.0 13.5 1.0
OD2 J:ASP464 4.1 11.1 1.0
O J:ASP462 4.4 11.5 1.0
C J:ASP462 4.6 11.5 1.0
N J:ASP464 4.7 11.1 1.0
CB J:ASP464 4.8 11.1 1.0
CA J:ASP462 4.8 11.5 1.0
CA J:ASP464 4.8 11.1 1.0
OE2 N:GLU4 4.8 15.1 1.0
NZ I:LYS1073 4.9 10.9 1.0
CG J:ASP460 4.9 13.5 1.0
OD2 J:ASP460 5.0 13.5 1.0

Reference:

J.Chen, C.Chiu, S.Gopalkrishnan, A.Y.Chen, P.D.B.Olinares, R.M.Saecker, J.T.Winkelman, M.F.Maloney, B.T.Chait, W.Ross, R.L.Gourse, E.A.Campbell, S.A.Darst. Stepwise Promoter Melting By Bacterial Rna Polymerase. Mol.Cell 2020.
ISSN: ISSN 1097-2765
PubMed: 32160514
DOI: 10.1016/J.MOLCEL.2020.02.017
Page generated: Tue Oct 1 15:18:13 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy