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Magnesium in PDB 6q89: Neisseria Gonorrhoeae Leucyl-Trna Synthetase in Complex with the Intermediate Analog 5'-O-(N-(L-Leucyl)-Sulfamoyl)Adenosine
Enzymatic activity of Neisseria Gonorrhoeae Leucyl-Trna Synthetase in Complex with the Intermediate Analog 5'-O-(N-(L-Leucyl)-Sulfamoyl)Adenosine
All present enzymatic activity of Neisseria Gonorrhoeae Leucyl-Trna Synthetase in Complex with the Intermediate Analog 5'-O-(N-(L-Leucyl)-Sulfamoyl)Adenosine:
6.1.1.4;
6.1.1.4;
Protein crystallography data
The structure of Neisseria Gonorrhoeae Leucyl-Trna Synthetase in Complex with the Intermediate Analog 5'-O-(N-(L-Leucyl)-Sulfamoyl)Adenosine, PDB code: 6q89
was solved by
L.Pang,
S.De Graef,
S.V.Strelkov,
S.D.Weeks,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 77.96 / 2.21 |
| Space group | P 21 21 21 |
| Cell size a, b, c (Å), α, β, γ (°) | 48.942, 82.935, 228.519, 90.00, 90.00, 90.00 |
| R / Rfree (%) | 17.7 / 22.3 |
Other elements in 6q89:
The structure of Neisseria Gonorrhoeae Leucyl-Trna Synthetase in Complex with the Intermediate Analog 5'-O-(N-(L-Leucyl)-Sulfamoyl)Adenosine also contains other interesting chemical elements:
| Zinc | (Zn) | 1 atom |
Magnesium Binding Sites:
The binding sites of Magnesium atom in the Neisseria Gonorrhoeae Leucyl-Trna Synthetase in Complex with the Intermediate Analog 5'-O-(N-(L-Leucyl)-Sulfamoyl)Adenosine
(pdb code 6q89). This binding sites where shown within
5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Neisseria Gonorrhoeae Leucyl-Trna Synthetase in Complex with the Intermediate Analog 5'-O-(N-(L-Leucyl)-Sulfamoyl)Adenosine, PDB code: 6q89:
In total only one binding site of Magnesium was determined in the Neisseria Gonorrhoeae Leucyl-Trna Synthetase in Complex with the Intermediate Analog 5'-O-(N-(L-Leucyl)-Sulfamoyl)Adenosine, PDB code: 6q89:
Magnesium binding site 1 out of 1 in 6q89
Go back to
Magnesium Binding Sites List in 6q89
Magnesium binding site 1 out
of 1 in the Neisseria Gonorrhoeae Leucyl-Trna Synthetase in Complex with the Intermediate Analog 5'-O-(N-(L-Leucyl)-Sulfamoyl)Adenosine
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Magnesium with other atoms in the Mg binding
site number 1 of Neisseria Gonorrhoeae Leucyl-Trna Synthetase in Complex with the Intermediate Analog 5'-O-(N-(L-Leucyl)-Sulfamoyl)Adenosine within 5.0Å range:
|
Reference:
M.Nautiyal,
S.De Graef,
L.Pang,
B.Gadakh,
S.V.Strelkov,
S.D.Weeks,
A.Van Aerschot.
Comparative Analysis of Pyrimidine Substituted Aminoacyl-Sulfamoyl Nucleosides As Potential Inhibitors Targeting Class I Aminoacyl-Trna Synthetases. Eur.J.Med.Chem. V. 173 154 2019.
ISSN: ISSN 0223-5234
PubMed: 30995568
DOI: 10.1016/J.EJMECH.2019.04.003
Page generated: Tue Oct 1 15:25:19 2024
ISSN: ISSN 0223-5234
PubMed: 30995568
DOI: 10.1016/J.EJMECH.2019.04.003
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