Magnesium in PDB 6qbt: Structure of the Htlv-2 Integrase Catalytic Core Domain in Complex with Magnesium (Trimeric Form)

The structure of Structure of the Htlv-2 Integrase Catalytic Core Domain in Complex with Magnesium (Trimeric Form), PDB code: 6qbt was solved by M.S.Barski, J.J.Minnell, G.N.Maertens, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	40.98 / 2.29
Space group	P 43 3 2
Cell size a, b, c (Å), α, β, γ (°)	115.920, 115.920, 115.920, 90.00, 90.00, 90.00
R / Rfree (%)	n/a / n/a

The binding sites of Magnesium atom in the Structure of the Htlv-2 Integrase Catalytic Core Domain in Complex with Magnesium (Trimeric Form) (pdb code 6qbt). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Structure of the Htlv-2 Integrase Catalytic Core Domain in Complex with Magnesium (Trimeric Form), PDB code: 6qbt:

Magnesium binding site 1 out of 1 in the Structure of the Htlv-2 Integrase Catalytic Core Domain in Complex with Magnesium (Trimeric Form)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of the Htlv-2 Integrase Catalytic Core Domain in Complex with Magnesium (Trimeric Form) within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg301 b:64.2 occ:1.00 OD2 A:ASP122 2.0 46.5 1.0 OD1 A:ASP65 2.2 42.0 1.0 CG A:ASP122 3.1 43.7 1.0 CG A:ASP65 3.2 36.5 1.0 OD1 A:ASP122 3.5 46.9 1.0 OD2 A:ASP65 3.5 39.9 1.0 O A:VAL66 3.9 38.0 1.0 N A:VAL66 4.3 35.2 1.0 CB A:ASP122 4.4 41.2 1.0 CB A:ASP65 4.7 34.8 1.0 C A:VAL66 4.9 37.1 1.0 CA A:VAL66 5.0 35.3 1.0 CB A:VAL66 5.0 35.8 1.0 CA A:ASP65 5.0 34.0 1.0

M.S.Barski, J.J.Minnell, G.N.Maertens. Inhibition of Htlv-1 Integration By Hiv-1 First- and Second-Generation Integrase Strand Transfer Inhibitors: A Comparative Structural and Functional Perspective To Be Published.