Magnesium in PDB 6qbt: Structure of the Htlv-2 Integrase Catalytic Core Domain in Complex with Magnesium (Trimeric Form)

Protein crystallography data

The structure of Structure of the Htlv-2 Integrase Catalytic Core Domain in Complex with Magnesium (Trimeric Form), PDB code: 6qbt was solved by M.S.Barski, J.J.Minnell, G.N.Maertens, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 40.98 / 2.29
Space group P 43 3 2
Cell size a, b, c (Å), α, β, γ (°) 115.920, 115.920, 115.920, 90.00, 90.00, 90.00
R / Rfree (%) n/a / n/a

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Structure of the Htlv-2 Integrase Catalytic Core Domain in Complex with Magnesium (Trimeric Form) (pdb code 6qbt). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Structure of the Htlv-2 Integrase Catalytic Core Domain in Complex with Magnesium (Trimeric Form), PDB code: 6qbt:

Magnesium binding site 1 out of 1 in 6qbt

Go back to Magnesium Binding Sites List in 6qbt
Magnesium binding site 1 out of 1 in the Structure of the Htlv-2 Integrase Catalytic Core Domain in Complex with Magnesium (Trimeric Form)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of the Htlv-2 Integrase Catalytic Core Domain in Complex with Magnesium (Trimeric Form) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg301

b:64.2
occ:1.00
OD2 A:ASP122 2.0 46.5 1.0
OD1 A:ASP65 2.2 42.0 1.0
CG A:ASP122 3.1 43.7 1.0
CG A:ASP65 3.2 36.5 1.0
OD1 A:ASP122 3.5 46.9 1.0
OD2 A:ASP65 3.5 39.9 1.0
O A:VAL66 3.9 38.0 1.0
N A:VAL66 4.3 35.2 1.0
CB A:ASP122 4.4 41.2 1.0
CB A:ASP65 4.7 34.8 1.0
C A:VAL66 4.9 37.1 1.0
CA A:VAL66 5.0 35.3 1.0
CB A:VAL66 5.0 35.8 1.0
CA A:ASP65 5.0 34.0 1.0

Reference:

M.S.Barski, J.J.Minnell, G.N.Maertens. Inhibition of Htlv-1 Integration By Hiv-1 First- and Second-Generation Integrase Strand Transfer Inhibitors: A Comparative Structural and Functional Perspective To Be Published.
Page generated: Mon Dec 14 23:51:59 2020

Last articles

Zn in 7VD8
Zn in 7V1R
Zn in 7V1Q
Zn in 7VPF
Zn in 7T85
Zn in 7T5F
Zn in 7NF9
Zn in 7M4M
Zn in 7M4O
Zn in 7M4N
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy