Magnesium in PDB 6qda: Leishmania Major N-Myristoyltransferase in Complex with Quinazoline Inhibitor Imp-0000811

Enzymatic activity of Leishmania Major N-Myristoyltransferase in Complex with Quinazoline Inhibitor Imp-0000811

All present enzymatic activity of Leishmania Major N-Myristoyltransferase in Complex with Quinazoline Inhibitor Imp-0000811:
2.3.1.97;

Protein crystallography data

The structure of Leishmania Major N-Myristoyltransferase in Complex with Quinazoline Inhibitor Imp-0000811, PDB code: 6qda was solved by J.A.Brannigan, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 49.00 / 1.60
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 48.048, 90.414, 53.316, 90.00, 111.97, 90.00
R / Rfree (%) 16.5 / 20.6

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Leishmania Major N-Myristoyltransferase in Complex with Quinazoline Inhibitor Imp-0000811 (pdb code 6qda). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Leishmania Major N-Myristoyltransferase in Complex with Quinazoline Inhibitor Imp-0000811, PDB code: 6qda:

Magnesium binding site 1 out of 1 in 6qda

Go back to Magnesium Binding Sites List in 6qda
Magnesium binding site 1 out of 1 in the Leishmania Major N-Myristoyltransferase in Complex with Quinazoline Inhibitor Imp-0000811


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Leishmania Major N-Myristoyltransferase in Complex with Quinazoline Inhibitor Imp-0000811 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg1002

b:17.6
occ:1.00
 O A:LEU175 2.7 12.7 1.0
O1A A:MYA1001 2.9 9.9 1.0
N A:LYS178 2.9 12.5 1.0
O5A A:MYA1001 3.0 11.1 1.0
N A:LEU180 3.1 10.0 1.0
N A:ARG179 3.4 10.9 1.0
CB A:LEU180 3.4 10.6 1.0
N A:GLU177 3.5 13.2 1.0
CA A:LYS178 3.5 12.8 1.0
C A:LYS178 3.5 11.8 1.0
P1A A:MYA1001 3.7 9.8 1.0
CB A:LYS178 3.7 15.6 1.0
O2A A:MYA1001 3.7 10.6 1.0
C A:ARG176 3.8 13.5 1.0
CA A:LEU180 3.8 9.7 1.0
C A:LEU175 3.9 11.6 1.0
C A:GLU177 4.0 14.1 1.0
CA A:ARG176 4.0 12.1 1.0
CG1 A:VAL171 4.0 10.1 1.0
CA A:GLU177 4.1 14.3 0.5
C A:ARG179 4.1 11.5 1.0
CA A:GLU177 4.2 14.0 0.5
P2A A:MYA1001 4.2 10.0 1.0
CA A:ARG179 4.2 11.7 1.0
N A:ALA181 4.3 8.7 1.0
O3A A:MYA1001 4.4 9.4 1.0
O A:LYS178 4.4 12.3 1.0
N A:ARG176 4.4 11.7 1.0
CG A:LYS178 4.6 18.1 1.0
O A:ARG176 4.6 13.9 1.0
C A:LEU180 4.6 9.2 1.0
O6A A:MYA1001 4.7 9.6 1.0
CG2 A:VAL171 4.8 9.1 1.0
CG A:LEU180 4.8 12.1 1.0
CB A:VAL171 4.9 8.7 1.0

Reference:

J.A.Brannigan, J.A.Brannigan. N/A N/A.
Page generated: Mon Dec 14 23:52:12 2020

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