Magnesium in PDB 6qzy: Full Length Opha V406P in Complex with Sah

The structure of Full Length Opha V406P in Complex with Sah, PDB code: 6qzy was solved by H.Song, J.H.Naismith, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	80.39 / 1.61
Space group	I 2 2 2
Cell size a, b, c (Å), α, β, γ (°)	86.047, 92.447, 162.763, 90.00, 90.00, 90.00
R / Rfree (%)	19 / 20.5

The binding sites of Magnesium atom in the Full Length Opha V406P in Complex with Sah (pdb code 6qzy). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Full Length Opha V406P in Complex with Sah, PDB code: 6qzy:

Magnesium binding site 1 out of 1 in the Full Length Opha V406P in Complex with Sah


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Full Length Opha V406P in Complex with Sah within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg503 b:45.4 occ:1.00 O A:SER166 2.6 30.7 1.0 OH A:TYR202 2.7 36.2 1.0 O A:ILE248 3.0 30.2 1.0 O A:PRO249 3.3 33.8 1.0 CE1 A:TYR202 3.4 36.5 1.0 CZ A:TYR202 3.4 36.5 1.0 C A:PRO249 3.5 33.7 1.0 O A:SER163 3.6 34.6 1.0 N A:LEU168 3.7 27.3 1.0 N A:PRO250 3.8 34.8 1.0 CB A:LEU168 3.8 29.0 1.0 O A:HOH659 3.8 34.3 1.0 C A:ILE248 3.8 31.2 1.0 C A:SER166 3.8 30.2 1.0 CA A:PRO250 3.9 36.7 1.0 C A:HIS167 4.0 27.6 1.0 CG2 A:ILE248 4.1 34.4 1.0 CA A:HIS167 4.3 28.1 1.0 CA A:PRO249 4.3 32.4 1.0 CA A:LEU168 4.4 27.6 1.0 CB A:ILE248 4.4 33.0 1.0 N A:PRO249 4.4 31.9 1.0 N A:HIS167 4.5 28.7 1.0 C A:SER163 4.6 36.2 1.0 O A:HIS167 4.6 28.1 1.0 CD A:PRO250 4.6 34.9 1.0 CD1 A:TYR202 4.7 37.6 1.0 CE2 A:TYR202 4.7 36.5 1.0 CA A:ILE164 4.7 37.8 1.0 CA A:ILE248 4.7 31.6 1.0 C A:ILE164 4.8 36.8 1.0 N A:SER166 4.8 32.5 1.0 O A:ILE164 4.9 38.0 1.0 C A:PRO250 4.9 39.2 1.0 CA A:SER166 4.9 30.9 1.0 CB A:PRO250 5.0 37.0 1.0

H.Song, J.H.Naismith. Full Length Opha V404E in Complex with Sah To Be Published.