Atomistry » Magnesium » PDB 6r5k-6rde » 6ra5
Atomistry »
  Magnesium »
    PDB 6r5k-6rde »
      6ra5 »

Magnesium in PDB 6ra5: Human Tnik in Complex with Compound 9

Enzymatic activity of Human Tnik in Complex with Compound 9

All present enzymatic activity of Human Tnik in Complex with Compound 9:
2.7.11.1;

Protein crystallography data

The structure of Human Tnik in Complex with Compound 9, PDB code: 6ra5 was solved by J.A.Read, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 45.80 / 2.90
Space group P 32
Cell size a, b, c (Å), α, β, γ (°) 53.793, 53.793, 253.363, 90.00, 90.00, 120.00
R / Rfree (%) n/a / n/a

Other elements in 6ra5:

The structure of Human Tnik in Complex with Compound 9 also contains other interesting chemical elements:

Fluorine (F) 1 atom
Bromine (Br) 1 atom

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Human Tnik in Complex with Compound 9 (pdb code 6ra5). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Human Tnik in Complex with Compound 9, PDB code: 6ra5:

Magnesium binding site 1 out of 1 in 6ra5

Go back to Magnesium Binding Sites List in 6ra5
Magnesium binding site 1 out of 1 in the Human Tnik in Complex with Compound 9


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Human Tnik in Complex with Compound 9 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg401

b:0.2
occ:1.00
CB B:THR84 2.6 0.7 1.0
OE2 B:GLU106 2.8 0.0 1.0
O B:ILE82 2.9 99.5 1.0
O B:SER77 3.0 97.7 1.0
O B:HIS79 3.2 0.1 1.0
CG2 B:THR84 3.2 0.9 1.0
N B:THR84 3.3 96.2 1.0
CA B:THR84 3.4 97.0 1.0
OG1 B:THR84 3.5 0.8 1.0
CD B:GLU106 4.0 0.7 1.0
C B:ILE82 4.1 97.7 1.0
C B:ALA83 4.2 98.1 1.0
C B:SER77 4.3 0.3 1.0
C B:HIS79 4.3 0.7 1.0
O B:HIS78 4.4 1.0 1.0
NZ B:LYS168 4.4 0.2 1.0
C B:HIS78 4.5 0.8 1.0
CA B:ALA83 4.6 94.3 1.0
CA B:HIS78 4.6 1.0 1.0
CG B:GLU106 4.7 94.9 1.0
N B:ALA83 4.8 93.7 1.0
N B:HIS79 4.8 97.0 1.0
C B:THR84 4.9 96.5 1.0
N B:HIS78 5.0 0.1 1.0
CA B:ARG80 5.0 98.3 1.0
OE1 B:GLU106 5.0 93.3 1.0

Reference:

J.A.Read, J.A.Read. N/A N/A.
Page generated: Tue Oct 1 16:39:11 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy