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Magnesium in PDB 6ra7: Human Tnik in Complex with Compound 9

Enzymatic activity of Human Tnik in Complex with Compound 9

All present enzymatic activity of Human Tnik in Complex with Compound 9:
2.7.11.1;

Protein crystallography data

The structure of Human Tnik in Complex with Compound 9, PDB code: 6ra7 was solved by J.A.Read, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 128.00 / 1.20
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 48.916, 53.667, 127.927, 90.00, 90.00, 90.00
R / Rfree (%) n/a / n/a

Other elements in 6ra7:

The structure of Human Tnik in Complex with Compound 9 also contains other interesting chemical elements:

Fluorine (F) 1 atom

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Human Tnik in Complex with Compound 9 (pdb code 6ra7). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Human Tnik in Complex with Compound 9, PDB code: 6ra7:

Magnesium binding site 1 out of 1 in 6ra7

Go back to Magnesium Binding Sites List in 6ra7
Magnesium binding site 1 out of 1 in the Human Tnik in Complex with Compound 9


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Human Tnik in Complex with Compound 9 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg402

b:11.0
occ:1.00
O A:ILE82 2.2 9.8 0.5
O A:ILE82 2.3 10.1 0.5
O A:HIS79 2.3 10.0 1.0
OG1 A:THR84 2.4 12.0 1.0
O A:SER77 2.4 11.9 1.0
O A:HOH505 2.4 22.6 1.0
O A:HIS78 3.3 14.0 1.0
C A:HIS79 3.3 10.0 1.0
C A:HIS78 3.3 13.9 1.0
C A:ILE82 3.4 9.3 0.5
C A:ILE82 3.4 9.8 0.5
C A:SER77 3.5 12.5 1.0
CB A:THR84 3.6 10.5 1.0
N A:THR84 3.6 9.6 1.0
CA A:THR84 3.7 9.5 1.0
N A:HIS79 3.7 11.2 1.0
CA A:HIS78 3.9 11.4 1.0
C A:ALA83 4.1 10.1 1.0
N A:ILE82 4.1 8.8 0.5
N A:ILE82 4.1 9.7 0.5
CA A:ILE82 4.1 8.2 0.5
OE2 A:GLU106 4.1 14.8 1.0
CA A:HIS79 4.1 10.6 1.0
N A:HIS78 4.2 11.4 1.0
N A:ARG80 4.2 9.6 1.0
CA A:ILE82 4.2 9.5 0.5
CB A:ILE82 4.2 9.4 0.5
O A:HOH557 4.3 26.9 1.0
CA A:ARG80 4.3 10.3 1.0
CG2 A:THR84 4.4 12.3 1.0
N A:ALA83 4.4 9.8 1.0
CB A:ILE82 4.5 11.4 0.5
CA A:ALA83 4.5 9.2 1.0
O A:HOH644 4.5 23.7 1.0
C A:ARG80 4.5 11.1 1.0
O A:ALA83 4.6 10.4 1.0
CA A:SER77 4.6 10.1 1.0
NZ A:LYS168 4.7 24.7 1.0
O A:ARG80 4.8 13.3 1.0
N A:ASN81 5.0 8.8 1.0

Reference:

J.A.Read, J.A.Read. N/A N/A.
Page generated: Tue Oct 1 16:39:12 2024

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