Magnesium in PDB 6rag: Heterodimeric Abc Exporter Tmrab in Inward-Facing Wide Conformation Under Turnover Conditions

The binding sites of Magnesium atom in the Heterodimeric Abc Exporter Tmrab in Inward-Facing Wide Conformation Under Turnover Conditions (pdb code 6rag). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Heterodimeric Abc Exporter Tmrab in Inward-Facing Wide Conformation Under Turnover Conditions, PDB code: 6rag:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Heterodimeric Abc Exporter Tmrab in Inward-Facing Wide Conformation Under Turnover Conditions


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Heterodimeric Abc Exporter Tmrab in Inward-Facing Wide Conformation Under Turnover Conditions within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg701 b:0.0 occ:1.00 O2B A:ADP702 2.5 0.4 1.0 OG1 A:THR400 2.6 0.3 1.0 OD2 A:ASP522 2.7 0.5 1.0 O3A A:ADP702 3.0 0.4 1.0 PB A:ADP702 3.1 0.4 1.0 O1B A:ADP702 3.3 0.4 1.0 OE1 A:GLN441 3.5 0.2 1.0 N A:THR400 3.7 0.3 1.0 CG A:ASP522 3.7 0.5 1.0 CB A:THR400 3.9 0.3 1.0 CB A:LYS399 4.0 0.3 1.0 CA A:THR400 4.2 0.3 1.0 NZ A:LYS399 4.2 0.3 1.0 PA A:ADP702 4.3 0.4 1.0 CE A:LYS399 4.3 0.3 1.0 O2A A:ADP702 4.3 0.4 1.0 C A:LYS399 4.4 0.3 1.0 OD1 A:ASP522 4.5 0.5 1.0 CB A:ASP522 4.6 0.5 1.0 O3B A:ADP702 4.6 0.4 1.0 CD A:GLN441 4.7 0.2 1.0 O5' A:ADP702 4.7 0.4 1.0 CA A:LYS399 4.7 0.3 1.0 CG2 A:THR400 5.0 0.3 1.0

Magnesium binding site 2 out of 2 in the Heterodimeric Abc Exporter Tmrab in Inward-Facing Wide Conformation Under Turnover Conditions


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Heterodimeric Abc Exporter Tmrab in Inward-Facing Wide Conformation Under Turnover Conditions within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg601 b:0.7 occ:1.00 O1B B:ATP602 1.9 0.8 1.0 O1G B:ATP602 1.9 0.8 1.0 OE1 B:GLN419 2.0 98.9 1.0 OG B:SER378 2.0 0.3 1.0 PB B:ATP602 2.8 0.8 1.0 CB B:SER378 3.0 0.3 1.0 PG B:ATP602 3.1 0.8 1.0 CD B:GLN419 3.1 98.9 1.0 O2B B:ATP602 3.2 0.8 1.0 O3B B:ATP602 3.3 0.8 1.0 NE2 B:GLN419 3.6 98.9 1.0 O3G B:ATP602 3.8 0.8 1.0 N B:SER378 3.8 0.3 1.0 CA B:SER378 3.9 0.3 1.0 CG B:LYS377 3.9 0.5 1.0 CE B:LYS377 4.0 0.5 1.0 OD2 B:ASP500 4.2 0.4 1.0 O3A B:ATP602 4.2 0.8 1.0 O2A B:ATP602 4.2 0.8 1.0 O2G B:ATP602 4.3 0.8 1.0 CG B:GLN419 4.3 98.9 1.0 CD B:LYS377 4.4 0.5 1.0 NZ B:LYS377 4.4 0.5 1.0 C B:LYS377 4.9 0.5 1.0 PA B:ATP602 4.9 0.8 1.0

S.Hofmann, D.Januliene, A.R.Mehdipour, C.Thomas, E.Stefan, S.Bruchert, B.T.Kuhn, E.R.Geertsma, G.Hummer, R.Tampe, A.Moeller. Conformation Space of A Heterodimeric Abc Exporter Under Turnover Conditions. Nature V. 571 580 2019.
ISSN: ESSN 1476-4687
PubMed: 31316210
DOI: 10.1038/S41586-019-1391-0