Magnesium in PDB 6rah: Heterodimeric Abc Exporter Tmrab in Atp-Bound Outward-Facing Open Conformation

The binding sites of Magnesium atom in the Heterodimeric Abc Exporter Tmrab in Atp-Bound Outward-Facing Open Conformation (pdb code 6rah). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Heterodimeric Abc Exporter Tmrab in Atp-Bound Outward-Facing Open Conformation, PDB code: 6rah:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Heterodimeric Abc Exporter Tmrab in Atp-Bound Outward-Facing Open Conformation


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Heterodimeric Abc Exporter Tmrab in Atp-Bound Outward-Facing Open Conformation within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg702 b:50.8 occ:1.00 O A:HOH802 2.0 47.9 1.0 OG1 A:THR400 2.0 49.8 1.0 O2G A:ATP701 2.1 49.2 1.0 O2B A:ATP701 2.1 49.2 1.0 O A:HOH801 2.2 54.0 1.0 OE1 A:GLN441 2.2 54.1 1.0 PG A:ATP701 3.2 49.2 1.0 CB A:THR400 3.3 49.8 1.0 PB A:ATP701 3.3 49.2 1.0 CD A:GLN441 3.4 54.1 1.0 O3B A:ATP701 3.4 49.2 1.0 O3G A:ATP701 3.6 49.2 1.0 OD2 A:ASP522 4.0 58.9 1.0 NE2 A:GLN441 4.1 54.1 1.0 CG2 A:THR400 4.1 49.8 1.0 N A:THR400 4.1 49.8 1.0 OD1 A:ASP522 4.3 58.9 1.0 CA A:THR400 4.3 49.8 1.0 O3A A:ATP701 4.3 49.2 1.0 O2A A:ATP701 4.4 49.2 1.0 O1B A:ATP701 4.4 49.2 1.0 CG A:GLN441 4.5 54.1 1.0 O1G A:ATP701 4.5 49.2 1.0 CG A:ASP522 4.6 58.9 1.0 N B:GLY477 4.7 45.2 1.0 PA A:ATP701 4.7 49.2 1.0 O1A A:ATP701 4.7 49.2 1.0 CB B:SER476 4.9 43.9 1.0

Magnesium binding site 2 out of 2 in the Heterodimeric Abc Exporter Tmrab in Atp-Bound Outward-Facing Open Conformation


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Heterodimeric Abc Exporter Tmrab in Atp-Bound Outward-Facing Open Conformation within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg602 b:48.1 occ:1.00 O2B B:ATP601 2.1 55.7 1.0 O B:HOH701 2.1 47.7 1.0 O B:HOH702 2.1 47.9 1.0 O3G B:ATP601 2.1 55.7 1.0 OE1 B:GLN419 2.2 51.0 1.0 OG B:SER378 2.3 47.0 1.0 CD B:GLN419 2.9 51.0 1.0 NE2 B:GLN419 3.3 51.0 1.0 PB B:ATP601 3.4 55.7 1.0 PG B:ATP601 3.4 55.7 1.0 CB B:SER378 3.4 47.0 1.0 O3B B:ATP601 3.6 55.7 1.0 OD1 B:ASP499 3.8 50.5 1.0 O2A B:ATP601 4.0 55.7 1.0 O1G B:ATP601 4.1 55.7 1.0 CG B:GLN419 4.2 51.0 1.0 N B:SER378 4.2 47.0 1.0 OD2 B:ASP499 4.4 50.5 1.0 O1B B:ATP601 4.4 55.7 1.0 CA B:SER378 4.4 47.0 1.0 O3A B:ATP601 4.4 55.7 1.0 CG B:ASP499 4.5 50.5 1.0 O2G B:ATP601 4.6 55.7 1.0 PA B:ATP601 4.6 55.7 1.0 O1A B:ATP601 4.8 55.7 1.0 OG1 A:THR499 4.9 51.2 1.0

S.Hofmann, D.Januliene, A.R.Mehdipour, C.Thomas, E.Stefan, S.Bruchert, B.T.Kuhn, E.R.Geertsma, G.Hummer, R.Tampe, A.Moeller. Conformation Space of A Heterodimeric Abc Exporter Under Turnover Conditions. Nature V. 571 580 2019.
ISSN: ESSN 1476-4687
PubMed: 31316210
DOI: 10.1038/S41586-019-1391-0