Atomistry » Magnesium » PDB 6r5k-6rde » 6rai
Atomistry »
  Magnesium »
    PDB 6r5k-6rde »
      6rai »

Magnesium in PDB 6rai: Heterodimeric Abc Exporter Tmrab in Atp-Bound Outward-Facing Occluded Conformation

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Heterodimeric Abc Exporter Tmrab in Atp-Bound Outward-Facing Occluded Conformation (pdb code 6rai). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Heterodimeric Abc Exporter Tmrab in Atp-Bound Outward-Facing Occluded Conformation, PDB code: 6rai:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in 6rai

Go back to Magnesium Binding Sites List in 6rai
Magnesium binding site 1 out of 2 in the Heterodimeric Abc Exporter Tmrab in Atp-Bound Outward-Facing Occluded Conformation


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Heterodimeric Abc Exporter Tmrab in Atp-Bound Outward-Facing Occluded Conformation within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg702

b:41.9
occ:1.00
O A:HOH802 1.9 41.4 1.0
O A:HOH801 2.1 44.3 1.0
OG1 A:THR400 2.1 43.6 1.0
OE1 A:GLN441 2.4 47.3 1.0
O3B A:ATP701 2.4 40.0 1.0
O2G A:ATP701 2.7 40.0 1.0
PG A:ATP701 3.2 40.0 1.0
CB A:THR400 3.4 43.6 1.0
CD A:GLN441 3.5 47.3 1.0
PB A:ATP701 3.7 40.0 1.0
O3A A:ATP701 3.8 40.0 1.0
OD1 A:ASP522 3.9 50.2 1.0
OD2 A:ASP522 3.9 50.2 1.0
O2A A:ATP701 3.9 40.0 1.0
CG A:GLN441 4.1 47.3 1.0
O3G A:ATP701 4.1 40.0 1.0
CG2 A:THR400 4.2 43.6 1.0
O1G A:ATP701 4.2 40.0 1.0
N A:THR400 4.3 43.6 1.0
CG A:ASP522 4.4 50.2 1.0
CA A:THR400 4.4 43.6 1.0
N B:GLY477 4.5 38.2 1.0
O2B A:ATP701 4.5 40.0 1.0
CB A:GLN441 4.5 47.3 1.0
PA A:ATP701 4.6 40.0 1.0
O1B A:ATP701 4.6 40.0 1.0
NE2 A:GLN441 4.6 47.3 1.0

Magnesium binding site 2 out of 2 in 6rai

Go back to Magnesium Binding Sites List in 6rai
Magnesium binding site 2 out of 2 in the Heterodimeric Abc Exporter Tmrab in Atp-Bound Outward-Facing Occluded Conformation


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Heterodimeric Abc Exporter Tmrab in Atp-Bound Outward-Facing Occluded Conformation within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg602

b:39.2
occ:1.00
OG B:SER378 2.1 40.9 1.0
O B:HOH701 2.1 41.8 1.0
O B:HOH702 2.1 41.6 1.0
O2B B:ATP601 2.2 48.1 1.0
O2G B:ATP601 2.3 48.1 1.0
OE1 B:GLN419 2.3 43.3 1.0
CB B:SER378 3.1 40.9 1.0
CD B:GLN419 3.5 43.3 1.0
PB B:ATP601 3.5 48.1 1.0
PG B:ATP601 3.6 48.1 1.0
OD1 B:ASP499 3.7 43.3 1.0
O3B B:ATP601 3.8 48.1 1.0
N B:SER378 4.0 40.9 1.0
NE2 B:GLN419 4.0 43.3 1.0
CA B:SER378 4.1 40.9 1.0
OD2 B:ASP499 4.2 43.3 1.0
O3G B:ATP601 4.2 48.1 1.0
O2A B:ATP601 4.3 48.1 1.0
CG B:ASP499 4.3 43.3 1.0
O1B B:ATP601 4.4 48.1 1.0
O1A B:ATP601 4.6 48.1 1.0
O3A B:ATP601 4.6 48.1 1.0
CG B:GLN419 4.7 43.3 1.0
PA B:ATP601 4.7 48.1 1.0
CB B:GLN419 4.7 43.3 1.0
O1G B:ATP601 4.8 48.1 1.0
OG1 A:THR499 5.0 42.8 1.0

Reference:

S.Hofmann, D.Januliene, A.R.Mehdipour, C.Thomas, E.Stefan, S.Bruchert, B.T.Kuhn, E.R.Geertsma, G.Hummer, R.Tampe, A.Moeller. Conformation Space of A Heterodimeric Abc Exporter Under Turnover Conditions. Nature V. 571 580 2019.
ISSN: ESSN 1476-4687
PubMed: 31316210
DOI: 10.1038/S41586-019-1391-0
Page generated: Tue Oct 1 16:39:55 2024

Last articles

Na in 6DQ1
Na in 6DW4
Na in 6DV0
Na in 6DV4
Na in 6DQ0
Na in 6DMC
Na in 6DMD
Na in 6DJQ
Na in 6DLT
Na in 6DLQ
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy