Magnesium in PDB 6rfl: Structure of the Complete Vaccinia Dna-Dependent Rna Polymerase Complex

All present enzymatic activity of Structure of the Complete Vaccinia Dna-Dependent Rna Polymerase Complex:
2.1.1.56; 2.7.7.6; 3.6.1.15;

The structure of Structure of the Complete Vaccinia Dna-Dependent Rna Polymerase Complex also contains other interesting chemical elements:

Zinc

(Zn)

4 atoms

The binding sites of Magnesium atom in the Structure of the Complete Vaccinia Dna-Dependent Rna Polymerase Complex (pdb code 6rfl). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Structure of the Complete Vaccinia Dna-Dependent Rna Polymerase Complex, PDB code: 6rfl:

Magnesium binding site 1 out of 1 in the Structure of the Complete Vaccinia Dna-Dependent Rna Polymerase Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of the Complete Vaccinia Dna-Dependent Rna Polymerase Complex within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg1301 b:36.1 occ:1.00 OD1 A:ASP415 2.1 35.7 1.0 OD1 A:ASP417 2.1 35.3 1.0 OD1 A:ASP419 2.1 35.0 1.0 CG A:ASP417 2.7 35.3 1.0 OD2 A:ASP417 2.8 35.3 1.0 CG A:ASP419 3.0 35.0 1.0 CG A:ASP415 3.1 35.7 1.0 OD2 A:ASP419 3.3 35.0 1.0 OD2 A:ASP415 3.4 35.7 1.0 O S:ASN226 4.1 56.1 1.0 CB A:ASP417 4.2 35.3 1.0 O A:ASP415 4.2 35.7 1.0 CB A:ASP419 4.4 35.0 1.0 CB A:ASP415 4.4 35.7 1.0 CB S:ASN226 4.5 56.1 1.0 N A:ASP419 4.5 35.0 1.0 C A:ASP417 4.5 35.3 1.0 N A:ASP417 4.6 35.3 1.0 O A:ASP417 4.6 35.3 1.0 CA A:ASP417 4.6 35.3 1.0 C A:ASP415 4.7 35.7 1.0 CA A:ASP419 4.8 35.0 1.0 N S:ASN226 4.8 56.1 1.0 C S:ASN226 4.8 56.1 1.0 N A:ASP415 4.9 35.7 1.0 N A:GLY418 4.9 36.9 1.0 CA A:ASP415 4.9 35.7 1.0 CA S:ASN226 4.9 56.1 1.0

C.Grimm, H.S.Hillen, K.Bedenk, J.Bartuli, S.Neyer, Q.Zhang, A.Huttenhofer, M.Erlacher, C.Dienemann, A.Schlosser, H.Urlaub, B.Bottcher, A.A.Szalay, P.Cramer, U.Fischer. Structural Basis of Poxvirus Transcription: Vaccinia Rna Polymerase Complexes. Cell V. 179 1537 2019.
ISSN: ISSN 1097-4172
PubMed: 31835032
DOI: 10.1016/J.CELL.2019.11.024