Magnesium in PDB 6rhz: Structure of A Minimal Photosystem I From A Green Alga
Enzymatic activity of Structure of A Minimal Photosystem I From A Green Alga
All present enzymatic activity of Structure of A Minimal Photosystem I From A Green Alga:
1.97.1.12;
Other elements in 6rhz:
The structure of Structure of A Minimal Photosystem I From A Green Alga also contains other interesting chemical elements:
Magnesium Binding Sites:
Pages:
>>> Page 1 <<<
Page 2, Binding sites: 11 -
20;
Page 3, Binding sites: 21 -
30;
Page 4, Binding sites: 31 -
40;
Page 5, Binding sites: 41 -
50;
Page 6, Binding sites: 51 -
60;
Page 7, Binding sites: 61 -
70;
Page 8, Binding sites: 71 -
80;
Page 9, Binding sites: 81 -
90;
Page 10, Binding sites: 91 -
100;
Page 11, Binding sites: 101 -
110;
Page 12, Binding sites: 111 -
120;
Page 13, Binding sites: 121 -
130;
Page 14, Binding sites: 131 -
140;
Page 15, Binding sites: 141 -
145;
Binding sites:
The binding sites of Magnesium atom in the Structure of A Minimal Photosystem I From A Green Alga
(pdb code 6rhz). This binding sites where shown within
5.0 Angstroms radius around Magnesium atom.
In total 145 binding sites of Magnesium where determined in the
Structure of A Minimal Photosystem I From A Green Alga, PDB code: 6rhz:
Jump to Magnesium binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
9;
10;
Magnesium binding site 1 out
of 145 in 6rhz
Go back to
Magnesium Binding Sites List in 6rhz
Magnesium binding site 1 out
of 145 in the Structure of A Minimal Photosystem I From A Green Alga
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 1 of Structure of A Minimal Photosystem I From A Green Alga within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
1:Mg601
b:93.9
occ:1.00
|
MG
|
1:CLA601
|
0.0
|
93.9
|
1.0
|
NB
|
1:CLA601
|
2.0
|
93.9
|
1.0
|
ND
|
1:CLA601
|
2.0
|
93.9
|
1.0
|
NA
|
1:CLA601
|
2.1
|
93.9
|
1.0
|
NC
|
1:CLA601
|
2.1
|
93.9
|
1.0
|
C4D
|
1:CLA601
|
2.9
|
93.9
|
1.0
|
C1B
|
1:CLA601
|
3.0
|
93.9
|
1.0
|
OE1
|
1:GLU177
|
3.0
|
92.1
|
1.0
|
C4A
|
1:CLA601
|
3.0
|
93.9
|
1.0
|
C4B
|
1:CLA601
|
3.0
|
93.9
|
1.0
|
C1C
|
1:CLA601
|
3.1
|
93.9
|
1.0
|
C1A
|
1:CLA601
|
3.1
|
93.9
|
1.0
|
C4C
|
1:CLA601
|
3.1
|
93.9
|
1.0
|
C1D
|
1:CLA601
|
3.1
|
93.9
|
1.0
|
CHB
|
1:CLA601
|
3.4
|
93.9
|
1.0
|
CHC
|
1:CLA601
|
3.4
|
93.9
|
1.0
|
CD
|
1:GLU177
|
3.4
|
92.1
|
1.0
|
CHA
|
1:CLA601
|
3.5
|
93.9
|
1.0
|
CHD
|
1:CLA601
|
3.5
|
93.9
|
1.0
|
OE2
|
1:GLU177
|
3.8
|
92.1
|
1.0
|
H182
|
1:LUT501
|
3.9
|
93.7
|
1.0
|
HG3
|
1:GLU177
|
4.0
|
92.1
|
1.0
|
H193
|
1:LUT501
|
4.0
|
93.7
|
1.0
|
HE
|
1:ARG80
|
4.0
|
91.4
|
1.0
|
HBA1
|
1:CLA601
|
4.1
|
93.9
|
1.0
|
HH21
|
1:ARG80
|
4.2
|
91.4
|
1.0
|
C3D
|
1:CLA601
|
4.2
|
93.9
|
1.0
|
C2B
|
1:CLA601
|
4.3
|
93.9
|
1.0
|
CG
|
1:GLU177
|
4.3
|
92.1
|
1.0
|
C3B
|
1:CLA601
|
4.3
|
93.9
|
1.0
|
C2C
|
1:CLA601
|
4.3
|
93.9
|
1.0
|
C2D
|
1:CLA601
|
4.3
|
93.9
|
1.0
|
C3C
|
1:CLA601
|
4.4
|
93.9
|
1.0
|
C3A
|
1:CLA601
|
4.4
|
93.9
|
1.0
|
C2A
|
1:CLA601
|
4.4
|
93.9
|
1.0
|
HHB
|
1:CLA601
|
4.5
|
93.9
|
1.0
|
HHC
|
1:CLA601
|
4.5
|
93.9
|
1.0
|
H41
|
1:LUT501
|
4.5
|
93.7
|
1.0
|
NE
|
1:ARG80
|
4.5
|
91.4
|
1.0
|
HB2
|
1:GLU177
|
4.6
|
92.1
|
1.0
|
C18
|
1:LUT501
|
4.6
|
93.7
|
1.0
|
HHD
|
1:CLA601
|
4.6
|
93.9
|
1.0
|
H183
|
1:LUT501
|
4.6
|
93.7
|
1.0
|
NH2
|
1:ARG80
|
4.7
|
91.4
|
1.0
|
HMA3
|
1:CLA601
|
4.7
|
93.9
|
1.0
|
H192
|
1:LUT501
|
4.7
|
93.7
|
1.0
|
HG2
|
1:ARG80
|
4.7
|
91.4
|
1.0
|
O2A
|
1:CLA601
|
4.8
|
93.9
|
1.0
|
C19
|
1:LUT501
|
4.8
|
93.7
|
1.0
|
H42
|
1:LUT501
|
4.8
|
93.7
|
1.0
|
C5
|
1:LUT501
|
4.8
|
93.7
|
1.0
|
H2
|
1:CLA601
|
4.8
|
93.9
|
1.0
|
C4
|
1:LUT501
|
4.9
|
93.7
|
1.0
|
CBD
|
1:CLA601
|
4.9
|
93.9
|
1.0
|
CZ
|
1:ARG80
|
4.9
|
91.4
|
1.0
|
CBA
|
1:CLA601
|
5.0
|
93.9
|
1.0
|
|
Magnesium binding site 2 out
of 145 in 6rhz
Go back to
Magnesium Binding Sites List in 6rhz
Magnesium binding site 2 out
of 145 in the Structure of A Minimal Photosystem I From A Green Alga
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 2 of Structure of A Minimal Photosystem I From A Green Alga within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
1:Mg602
b:91.6
occ:1.00
|
MG
|
1:CLA602
|
0.0
|
91.6
|
1.0
|
NB
|
1:CLA602
|
2.0
|
91.6
|
1.0
|
ND
|
1:CLA602
|
2.0
|
91.6
|
1.0
|
NC
|
1:CLA602
|
2.1
|
91.6
|
1.0
|
NA
|
1:CLA602
|
2.1
|
91.6
|
1.0
|
C4D
|
1:CLA602
|
2.9
|
91.6
|
1.0
|
C1B
|
1:CLA602
|
3.0
|
91.6
|
1.0
|
C4A
|
1:CLA602
|
3.0
|
91.6
|
1.0
|
C4B
|
1:CLA602
|
3.1
|
91.6
|
1.0
|
C1C
|
1:CLA602
|
3.1
|
91.6
|
1.0
|
OD1
|
1:ASN180
|
3.1
|
90.0
|
1.0
|
C4C
|
1:CLA602
|
3.1
|
91.6
|
1.0
|
C1D
|
1:CLA602
|
3.1
|
91.6
|
1.0
|
C1A
|
1:CLA602
|
3.2
|
91.6
|
1.0
|
CHB
|
1:CLA602
|
3.4
|
91.6
|
1.0
|
CHC
|
1:CLA602
|
3.4
|
91.6
|
1.0
|
CHA
|
1:CLA602
|
3.5
|
91.6
|
1.0
|
CHD
|
1:CLA602
|
3.5
|
91.6
|
1.0
|
CG
|
1:ASN180
|
4.0
|
90.0
|
1.0
|
HD21
|
1:ASN180
|
4.2
|
90.0
|
1.0
|
C3D
|
1:CLA602
|
4.3
|
91.6
|
1.0
|
C2B
|
1:CLA602
|
4.3
|
91.6
|
1.0
|
C3B
|
1:CLA602
|
4.3
|
91.6
|
1.0
|
C2C
|
1:CLA602
|
4.3
|
91.6
|
1.0
|
C2D
|
1:CLA602
|
4.3
|
91.6
|
1.0
|
C3C
|
1:CLA602
|
4.4
|
91.6
|
1.0
|
C3A
|
1:CLA602
|
4.4
|
91.6
|
1.0
|
C2A
|
1:CLA602
|
4.5
|
91.6
|
1.0
|
HHB
|
1:CLA602
|
4.5
|
91.6
|
1.0
|
ND2
|
1:ASN180
|
4.5
|
90.0
|
1.0
|
HHC
|
1:CLA602
|
4.5
|
91.6
|
1.0
|
HHD
|
1:CLA602
|
4.6
|
91.6
|
1.0
|
HMD2
|
1:CLA607
|
4.9
|
89.7
|
1.0
|
HMA3
|
1:CLA602
|
4.9
|
91.6
|
1.0
|
HB3
|
1:ASN180
|
4.9
|
90.0
|
1.0
|
CBD
|
1:CLA602
|
4.9
|
91.6
|
1.0
|
|
Magnesium binding site 3 out
of 145 in 6rhz
Go back to
Magnesium Binding Sites List in 6rhz
Magnesium binding site 3 out
of 145 in the Structure of A Minimal Photosystem I From A Green Alga
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 3 of Structure of A Minimal Photosystem I From A Green Alga within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
1:Mg603
b:90.2
occ:1.00
|
MG
|
1:CLA603
|
0.0
|
90.2
|
1.0
|
NB
|
1:CLA603
|
2.0
|
90.2
|
1.0
|
ND
|
1:CLA603
|
2.0
|
90.2
|
1.0
|
NA
|
1:CLA603
|
2.1
|
90.2
|
1.0
|
NC
|
1:CLA603
|
2.1
|
90.2
|
1.0
|
H11
|
1:CLA603
|
2.8
|
90.2
|
1.0
|
C4D
|
1:CLA603
|
2.9
|
90.2
|
1.0
|
C1B
|
1:CLA603
|
3.0
|
90.2
|
1.0
|
C4A
|
1:CLA603
|
3.0
|
90.2
|
1.0
|
C1C
|
1:CLA603
|
3.1
|
90.2
|
1.0
|
C4B
|
1:CLA603
|
3.1
|
90.2
|
1.0
|
C4C
|
1:CLA603
|
3.1
|
90.2
|
1.0
|
C1D
|
1:CLA603
|
3.1
|
90.2
|
1.0
|
C1A
|
1:CLA603
|
3.2
|
90.2
|
1.0
|
H2
|
1:CLA603
|
3.2
|
90.2
|
1.0
|
CHB
|
1:CLA603
|
3.4
|
90.2
|
1.0
|
CHC
|
1:CLA603
|
3.4
|
90.2
|
1.0
|
CHA
|
1:CLA603
|
3.5
|
90.2
|
1.0
|
CHD
|
1:CLA603
|
3.5
|
90.2
|
1.0
|
C2
|
1:CLA603
|
3.6
|
90.2
|
1.0
|
C1
|
1:CLA603
|
3.7
|
90.2
|
1.0
|
C3D
|
1:CLA603
|
4.3
|
90.2
|
1.0
|
H12
|
1:CLA603
|
4.3
|
90.2
|
1.0
|
HA3
|
1:GLY190
|
4.3
|
91.1
|
1.0
|
C2B
|
1:CLA603
|
4.3
|
90.2
|
1.0
|
HB2
|
1:GLN194
|
4.3
|
93.6
|
1.0
|
C3B
|
1:CLA603
|
4.3
|
90.2
|
1.0
|
C2C
|
1:CLA603
|
4.3
|
90.2
|
1.0
|
C2D
|
1:CLA603
|
4.4
|
90.2
|
1.0
|
HBB2
|
1:CLA615
|
4.4
|
91.3
|
1.0
|
C3C
|
1:CLA603
|
4.4
|
90.2
|
1.0
|
H52
|
1:CLA603
|
4.4
|
90.2
|
1.0
|
C3A
|
1:CLA603
|
4.4
|
90.2
|
1.0
|
C2A
|
1:CLA603
|
4.4
|
90.2
|
1.0
|
HHB
|
1:CLA603
|
4.5
|
90.2
|
1.0
|
C3
|
1:CLA603
|
4.5
|
90.2
|
1.0
|
HHC
|
1:CLA603
|
4.5
|
90.2
|
1.0
|
HA2
|
1:GLY190
|
4.6
|
91.1
|
1.0
|
O1A
|
1:CLA603
|
4.6
|
90.2
|
1.0
|
HHD
|
1:CLA603
|
4.6
|
90.2
|
1.0
|
CGA
|
1:CLA603
|
4.6
|
90.2
|
1.0
|
O2A
|
1:CLA603
|
4.7
|
90.2
|
1.0
|
CA
|
1:GLY190
|
4.9
|
91.1
|
1.0
|
CBD
|
1:CLA603
|
5.0
|
90.2
|
1.0
|
|
Magnesium binding site 4 out
of 145 in 6rhz
Go back to
Magnesium Binding Sites List in 6rhz
Magnesium binding site 4 out
of 145 in the Structure of A Minimal Photosystem I From A Green Alga
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 4 of Structure of A Minimal Photosystem I From A Green Alga within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
1:Mg604
b:86.5
occ:1.00
|
MG
|
1:CLA604
|
0.0
|
86.5
|
1.0
|
OE2
|
1:GLU75
|
2.0
|
87.6
|
1.0
|
NB
|
1:CLA604
|
2.0
|
86.5
|
1.0
|
ND
|
1:CLA604
|
2.0
|
86.5
|
1.0
|
NA
|
1:CLA604
|
2.1
|
86.5
|
1.0
|
NC
|
1:CLA604
|
2.1
|
86.5
|
1.0
|
C4D
|
1:CLA604
|
2.9
|
86.5
|
1.0
|
C1B
|
1:CLA604
|
3.0
|
86.5
|
1.0
|
C4A
|
1:CLA604
|
3.0
|
86.5
|
1.0
|
C4B
|
1:CLA604
|
3.0
|
86.5
|
1.0
|
C1C
|
1:CLA604
|
3.1
|
86.5
|
1.0
|
C4C
|
1:CLA604
|
3.1
|
86.5
|
1.0
|
C1D
|
1:CLA604
|
3.1
|
86.5
|
1.0
|
H362
|
1:XAT502
|
3.1
|
90.0
|
1.0
|
C1A
|
1:CLA604
|
3.1
|
86.5
|
1.0
|
H363
|
1:XAT502
|
3.2
|
90.0
|
1.0
|
CD
|
1:GLU75
|
3.2
|
87.6
|
1.0
|
CHB
|
1:CLA604
|
3.4
|
86.5
|
1.0
|
CHC
|
1:CLA604
|
3.4
|
86.5
|
1.0
|
CHA
|
1:CLA604
|
3.5
|
86.5
|
1.0
|
CHD
|
1:CLA604
|
3.5
|
86.5
|
1.0
|
C36
|
1:XAT502
|
3.5
|
90.0
|
1.0
|
HH21
|
1:ARG182
|
3.6
|
88.0
|
1.0
|
HE
|
1:ARG182
|
3.7
|
88.0
|
1.0
|
H361
|
1:XAT502
|
3.8
|
90.0
|
1.0
|
OE1
|
1:GLU75
|
4.0
|
87.6
|
1.0
|
HG3
|
1:GLU75
|
4.0
|
87.6
|
1.0
|
NH2
|
1:ARG182
|
4.2
|
88.0
|
1.0
|
C3D
|
1:CLA604
|
4.3
|
86.5
|
1.0
|
CG
|
1:GLU75
|
4.3
|
87.6
|
1.0
|
C2B
|
1:CLA604
|
4.3
|
86.5
|
1.0
|
C3B
|
1:CLA604
|
4.3
|
86.5
|
1.0
|
NE
|
1:ARG182
|
4.3
|
88.0
|
1.0
|
C2D
|
1:CLA604
|
4.3
|
86.5
|
1.0
|
C2C
|
1:CLA604
|
4.3
|
86.5
|
1.0
|
C3C
|
1:CLA604
|
4.4
|
86.5
|
1.0
|
C3A
|
1:CLA604
|
4.4
|
86.5
|
1.0
|
HBA1
|
1:CLA604
|
4.4
|
86.5
|
1.0
|
C2A
|
1:CLA604
|
4.5
|
86.5
|
1.0
|
HHB
|
1:CLA604
|
4.5
|
86.5
|
1.0
|
HHC
|
1:CLA604
|
4.5
|
86.5
|
1.0
|
HHD
|
1:CLA604
|
4.6
|
86.5
|
1.0
|
CZ
|
1:ARG182
|
4.6
|
88.0
|
1.0
|
HB2
|
1:GLU75
|
4.7
|
87.6
|
1.0
|
H373
|
1:XAT502
|
4.7
|
90.0
|
1.0
|
HMA1
|
1:CLA604
|
4.7
|
86.5
|
1.0
|
HH22
|
1:ARG182
|
4.7
|
88.0
|
1.0
|
HG2
|
1:ARG182
|
4.8
|
88.0
|
1.0
|
H371
|
1:XAT502
|
4.9
|
90.0
|
1.0
|
CBD
|
1:CLA604
|
4.9
|
86.5
|
1.0
|
HG2
|
1:GLU75
|
5.0
|
87.6
|
1.0
|
C21
|
1:XAT502
|
5.0
|
90.0
|
1.0
|
|
Magnesium binding site 5 out
of 145 in 6rhz
Go back to
Magnesium Binding Sites List in 6rhz
Magnesium binding site 5 out
of 145 in the Structure of A Minimal Photosystem I From A Green Alga
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 5 of Structure of A Minimal Photosystem I From A Green Alga within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
1:Mg605
b:83.4
occ:1.00
|
MG
|
1:CLA605
|
0.0
|
83.4
|
1.0
|
NB
|
1:CLA605
|
2.0
|
83.4
|
1.0
|
ND
|
1:CLA605
|
2.0
|
83.4
|
1.0
|
NE2
|
1:HIS78
|
2.0
|
87.4
|
1.0
|
NA
|
1:CLA605
|
2.1
|
83.4
|
1.0
|
NC
|
1:CLA605
|
2.1
|
83.4
|
1.0
|
CE1
|
1:HIS78
|
2.8
|
87.4
|
1.0
|
HE1
|
1:HIS78
|
2.8
|
87.4
|
1.0
|
C4D
|
1:CLA605
|
2.9
|
83.4
|
1.0
|
C1B
|
1:CLA605
|
3.0
|
83.4
|
1.0
|
C4A
|
1:CLA605
|
3.0
|
83.4
|
1.0
|
C4B
|
1:CLA605
|
3.0
|
83.4
|
1.0
|
C1C
|
1:CLA605
|
3.1
|
83.4
|
1.0
|
C4C
|
1:CLA605
|
3.1
|
83.4
|
1.0
|
C1D
|
1:CLA605
|
3.1
|
83.4
|
1.0
|
C1A
|
1:CLA605
|
3.2
|
83.4
|
1.0
|
CD2
|
1:HIS78
|
3.2
|
87.4
|
1.0
|
CHB
|
1:CLA605
|
3.4
|
83.4
|
1.0
|
CHC
|
1:CLA605
|
3.4
|
83.4
|
1.0
|
CHA
|
1:CLA605
|
3.5
|
83.4
|
1.0
|
CHD
|
1:CLA605
|
3.5
|
83.4
|
1.0
|
HD2
|
1:HIS78
|
3.6
|
87.4
|
1.0
|
ND1
|
1:HIS78
|
4.0
|
87.4
|
1.0
|
CG
|
1:HIS78
|
4.2
|
87.4
|
1.0
|
C2B
|
1:CLA605
|
4.3
|
83.4
|
1.0
|
C3D
|
1:CLA605
|
4.3
|
83.4
|
1.0
|
HMA2
|
1:CLA612
|
4.3
|
91.5
|
1.0
|
C3B
|
1:CLA605
|
4.3
|
83.4
|
1.0
|
C2C
|
1:CLA605
|
4.3
|
83.4
|
1.0
|
C2D
|
1:CLA605
|
4.3
|
83.4
|
1.0
|
C3C
|
1:CLA605
|
4.4
|
83.4
|
1.0
|
C3A
|
1:CLA605
|
4.4
|
83.4
|
1.0
|
C2A
|
1:CLA605
|
4.5
|
83.4
|
1.0
|
HBB2
|
1:CLA604
|
4.5
|
86.5
|
1.0
|
HHB
|
1:CLA605
|
4.5
|
83.4
|
1.0
|
HHC
|
1:CLA605
|
4.5
|
83.4
|
1.0
|
HHD
|
1:CLA605
|
4.6
|
83.4
|
1.0
|
HMA1
|
1:CLA612
|
4.7
|
91.5
|
1.0
|
HD1
|
1:HIS78
|
4.7
|
87.4
|
1.0
|
HMA3
|
1:CLA612
|
4.8
|
91.5
|
1.0
|
CMA
|
1:CLA612
|
4.8
|
91.5
|
1.0
|
HMA3
|
1:CLA605
|
4.9
|
83.4
|
1.0
|
CBD
|
1:CLA605
|
4.9
|
83.4
|
1.0
|
|
Magnesium binding site 6 out
of 145 in 6rhz
Go back to
Magnesium Binding Sites List in 6rhz
Magnesium binding site 6 out
of 145 in the Structure of A Minimal Photosystem I From A Green Alga
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 6 of Structure of A Minimal Photosystem I From A Green Alga within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
1:Mg606
b:0.9
occ:1.00
|
MG
|
1:CLA606
|
0.0
|
0.9
|
1.0
|
NB
|
1:CLA606
|
2.0
|
0.9
|
1.0
|
ND
|
1:CLA606
|
2.0
|
0.9
|
1.0
|
NA
|
1:CLA606
|
2.1
|
0.9
|
1.0
|
NC
|
1:CLA606
|
2.1
|
0.9
|
1.0
|
H281
|
1:BCR503
|
2.8
|
0.6
|
1.0
|
H271
|
1:BCR503
|
2.9
|
0.6
|
1.0
|
C4D
|
1:CLA606
|
2.9
|
0.9
|
1.0
|
C1B
|
1:CLA606
|
3.0
|
0.9
|
1.0
|
C4A
|
1:CLA606
|
3.0
|
0.9
|
1.0
|
C4B
|
1:CLA606
|
3.1
|
0.9
|
1.0
|
C1C
|
1:CLA606
|
3.1
|
0.9
|
1.0
|
H282
|
1:BCR503
|
3.1
|
0.6
|
1.0
|
C4C
|
1:CLA606
|
3.1
|
0.9
|
1.0
|
C1D
|
1:CLA606
|
3.1
|
0.9
|
1.0
|
C1A
|
1:CLA606
|
3.2
|
0.9
|
1.0
|
C28
|
1:BCR503
|
3.4
|
0.6
|
1.0
|
CHB
|
1:CLA606
|
3.4
|
0.9
|
1.0
|
CHC
|
1:CLA606
|
3.4
|
0.9
|
1.0
|
CHA
|
1:CLA606
|
3.5
|
0.9
|
1.0
|
CHD
|
1:CLA606
|
3.5
|
0.9
|
1.0
|
C27
|
1:BCR503
|
3.6
|
0.6
|
1.0
|
H171
|
1:XAT502
|
4.0
|
90.0
|
1.0
|
H272
|
1:BCR503
|
4.2
|
0.6
|
1.0
|
HE1
|
1:TRP115
|
4.2
|
0.4
|
1.0
|
C3D
|
1:CLA606
|
4.3
|
0.9
|
1.0
|
HA3
|
1:GLY88
|
4.3
|
96.4
|
1.0
|
C2B
|
1:CLA606
|
4.3
|
0.9
|
1.0
|
C3B
|
1:CLA606
|
4.3
|
0.9
|
1.0
|
C2D
|
1:CLA606
|
4.3
|
0.9
|
1.0
|
C2C
|
1:CLA606
|
4.3
|
0.9
|
1.0
|
HA2
|
1:GLY88
|
4.4
|
96.4
|
1.0
|
C3C
|
1:CLA606
|
4.4
|
0.9
|
1.0
|
C3A
|
1:CLA606
|
4.4
|
0.9
|
1.0
|
HBA2
|
1:CLA606
|
4.5
|
0.9
|
1.0
|
C2A
|
1:CLA606
|
4.5
|
0.9
|
1.0
|
HHB
|
1:CLA606
|
4.5
|
0.9
|
1.0
|
HHC
|
1:CLA606
|
4.5
|
0.9
|
1.0
|
HHD
|
1:CLA606
|
4.6
|
0.9
|
1.0
|
H173
|
1:XAT502
|
4.7
|
90.0
|
1.0
|
C17
|
1:XAT502
|
4.7
|
90.0
|
1.0
|
C26
|
1:BCR503
|
4.7
|
0.6
|
1.0
|
HD1
|
1:TRP115
|
4.8
|
0.4
|
1.0
|
H393
|
1:BCR503
|
4.8
|
0.6
|
1.0
|
CA
|
1:GLY88
|
4.8
|
96.4
|
1.0
|
C29
|
1:BCR503
|
4.8
|
0.6
|
1.0
|
H172
|
1:XAT502
|
4.9
|
90.0
|
1.0
|
CBD
|
1:CLA606
|
4.9
|
0.9
|
1.0
|
NE1
|
1:TRP115
|
5.0
|
0.4
|
1.0
|
|
Magnesium binding site 7 out
of 145 in 6rhz
Go back to
Magnesium Binding Sites List in 6rhz
Magnesium binding site 7 out
of 145 in the Structure of A Minimal Photosystem I From A Green Alga
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 7 of Structure of A Minimal Photosystem I From A Green Alga within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
1:Mg607
b:89.7
occ:1.00
|
MG
|
1:CLA607
|
0.0
|
89.7
|
1.0
|
NB
|
1:CLA607
|
2.0
|
89.7
|
1.0
|
ND
|
1:CLA607
|
2.0
|
89.7
|
1.0
|
NA
|
1:CLA607
|
2.1
|
89.7
|
1.0
|
NC
|
1:CLA607
|
2.1
|
89.7
|
1.0
|
O4
|
1:LHG801
|
2.1
|
89.5
|
1.0
|
C4D
|
1:CLA607
|
2.9
|
89.7
|
1.0
|
C1B
|
1:CLA607
|
3.0
|
89.7
|
1.0
|
C4A
|
1:CLA607
|
3.0
|
89.7
|
1.0
|
C4B
|
1:CLA607
|
3.1
|
89.7
|
1.0
|
C1C
|
1:CLA607
|
3.1
|
89.7
|
1.0
|
C1A
|
1:CLA607
|
3.1
|
89.7
|
1.0
|
C1D
|
1:CLA607
|
3.1
|
89.7
|
1.0
|
C4C
|
1:CLA607
|
3.1
|
89.7
|
1.0
|
CHB
|
1:CLA607
|
3.4
|
89.7
|
1.0
|
CHC
|
1:CLA607
|
3.4
|
89.7
|
1.0
|
CHA
|
1:CLA607
|
3.5
|
89.7
|
1.0
|
P
|
1:LHG801
|
3.5
|
89.5
|
1.0
|
CHD
|
1:CLA607
|
3.5
|
89.7
|
1.0
|
HC41
|
1:LHG801
|
3.5
|
89.5
|
1.0
|
HMD2
|
1:CLA602
|
3.9
|
91.6
|
1.0
|
HMD1
|
1:CLA602
|
3.9
|
91.6
|
1.0
|
HC42
|
1:LHG801
|
4.0
|
89.5
|
1.0
|
C4
|
1:LHG801
|
4.1
|
89.5
|
1.0
|
O6
|
1:LHG801
|
4.1
|
89.5
|
1.0
|
C3D
|
1:CLA607
|
4.3
|
89.7
|
1.0
|
C2B
|
1:CLA607
|
4.3
|
89.7
|
1.0
|
C3B
|
1:CLA607
|
4.3
|
89.7
|
1.0
|
C2C
|
1:CLA607
|
4.3
|
89.7
|
1.0
|
C2D
|
1:CLA607
|
4.3
|
89.7
|
1.0
|
C3C
|
1:CLA607
|
4.4
|
89.7
|
1.0
|
CMD
|
1:CLA602
|
4.4
|
91.6
|
1.0
|
C3A
|
1:CLA607
|
4.4
|
89.7
|
1.0
|
C2A
|
1:CLA607
|
4.5
|
89.7
|
1.0
|
O5
|
1:LHG801
|
4.5
|
89.5
|
1.0
|
HBA1
|
1:CLA607
|
4.5
|
89.7
|
1.0
|
HHB
|
1:CLA607
|
4.5
|
89.7
|
1.0
|
HC2
|
1:LHG801
|
4.5
|
89.5
|
1.0
|
HHC
|
1:CLA607
|
4.5
|
89.7
|
1.0
|
H02
|
1:LHG801
|
4.5
|
89.5
|
1.0
|
O3
|
1:LHG801
|
4.6
|
89.5
|
1.0
|
HHD
|
1:CLA607
|
4.6
|
89.7
|
1.0
|
HZ3
|
1:LYS179
|
4.6
|
89.9
|
1.0
|
HMD3
|
1:CLA602
|
4.8
|
91.6
|
1.0
|
HBA2
|
1:CLA607
|
4.8
|
89.7
|
1.0
|
CBD
|
1:CLA607
|
4.9
|
89.7
|
1.0
|
|
Magnesium binding site 8 out
of 145 in 6rhz
Go back to
Magnesium Binding Sites List in 6rhz
Magnesium binding site 8 out
of 145 in the Structure of A Minimal Photosystem I From A Green Alga
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 8 of Structure of A Minimal Photosystem I From A Green Alga within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
1:Mg608
b:89.6
occ:1.00
|
MG
|
1:CLA608
|
0.0
|
89.6
|
1.0
|
NE2
|
1:HIS209
|
2.0
|
91.0
|
1.0
|
NB
|
1:CLA608
|
2.0
|
89.6
|
1.0
|
ND
|
1:CLA608
|
2.0
|
89.6
|
1.0
|
NC
|
1:CLA608
|
2.1
|
89.6
|
1.0
|
NA
|
1:CLA608
|
2.1
|
89.6
|
1.0
|
CE1
|
1:HIS209
|
2.8
|
91.0
|
1.0
|
C4D
|
1:CLA608
|
2.9
|
89.6
|
1.0
|
HE1
|
1:HIS209
|
3.0
|
91.0
|
1.0
|
C1B
|
1:CLA608
|
3.0
|
89.6
|
1.0
|
C4A
|
1:CLA608
|
3.0
|
89.6
|
1.0
|
C4B
|
1:CLA608
|
3.0
|
89.6
|
1.0
|
C1C
|
1:CLA608
|
3.1
|
89.6
|
1.0
|
CD2
|
1:HIS209
|
3.1
|
91.0
|
1.0
|
H69
|
1:CHL609
|
3.1
|
88.4
|
1.0
|
C4C
|
1:CLA608
|
3.1
|
89.6
|
1.0
|
C1D
|
1:CLA608
|
3.1
|
89.6
|
1.0
|
C1A
|
1:CLA608
|
3.2
|
89.6
|
1.0
|
H50
|
1:CHL609
|
3.3
|
88.4
|
1.0
|
HD2
|
1:HIS209
|
3.4
|
91.0
|
1.0
|
CHB
|
1:CLA608
|
3.4
|
89.6
|
1.0
|
CHC
|
1:CLA608
|
3.4
|
89.6
|
1.0
|
CHA
|
1:CLA608
|
3.5
|
89.6
|
1.0
|
CHD
|
1:CLA608
|
3.5
|
89.6
|
1.0
|
H53
|
1:CHL609
|
4.0
|
88.4
|
1.0
|
ND1
|
1:HIS209
|
4.0
|
91.0
|
1.0
|
C15
|
1:CHL609
|
4.1
|
88.4
|
1.0
|
CG
|
1:HIS209
|
4.2
|
91.0
|
1.0
|
C3D
|
1:CLA608
|
4.3
|
89.6
|
1.0
|
C2B
|
1:CLA608
|
4.3
|
89.6
|
1.0
|
C12
|
1:CHL609
|
4.3
|
88.4
|
1.0
|
H56
|
1:CHL609
|
4.3
|
88.4
|
1.0
|
C3B
|
1:CLA608
|
4.3
|
89.6
|
1.0
|
HB3
|
1:PRO213
|
4.3
|
90.2
|
1.0
|
C2C
|
1:CLA608
|
4.3
|
89.6
|
1.0
|
C2D
|
1:CLA608
|
4.3
|
89.6
|
1.0
|
C3C
|
1:CLA608
|
4.4
|
89.6
|
1.0
|
C3A
|
1:CLA608
|
4.4
|
89.6
|
1.0
|
C2A
|
1:CLA608
|
4.5
|
89.6
|
1.0
|
C13
|
1:CHL609
|
4.5
|
88.4
|
1.0
|
HHB
|
1:CLA608
|
4.5
|
89.6
|
1.0
|
HBA2
|
1:CLA608
|
4.5
|
89.6
|
1.0
|
HHC
|
1:CLA608
|
4.5
|
89.6
|
1.0
|
H51
|
1:CHL609
|
4.5
|
88.4
|
1.0
|
HHD
|
1:CLA608
|
4.6
|
89.6
|
1.0
|
H58
|
1:CHL609
|
4.6
|
88.4
|
1.0
|
C14
|
1:CHL609
|
4.7
|
88.4
|
1.0
|
HD1
|
1:HIS209
|
4.8
|
91.0
|
1.0
|
H59
|
1:CHL609
|
4.9
|
88.4
|
1.0
|
CBD
|
1:CLA608
|
4.9
|
89.6
|
1.0
|
H46
|
1:CHL609
|
5.0
|
88.4
|
1.0
|
HMA3
|
1:CLA608
|
5.0
|
89.6
|
1.0
|
|
Magnesium binding site 9 out
of 145 in 6rhz
Go back to
Magnesium Binding Sites List in 6rhz
Magnesium binding site 9 out
of 145 in the Structure of A Minimal Photosystem I From A Green Alga
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 9 of Structure of A Minimal Photosystem I From A Green Alga within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
1:Mg609
b:88.4
occ:1.00
|
MG
|
1:CHL609
|
0.0
|
88.4
|
1.0
|
NB
|
1:CHL609
|
2.0
|
88.4
|
1.0
|
ND
|
1:CHL609
|
2.0
|
88.4
|
1.0
|
NC
|
1:CHL609
|
2.0
|
88.4
|
1.0
|
NA
|
1:CHL609
|
2.0
|
88.4
|
1.0
|
O
|
1:PHE37
|
2.9
|
86.6
|
1.0
|
C1C
|
1:CHL609
|
2.9
|
88.4
|
1.0
|
C4D
|
1:CHL609
|
2.9
|
88.4
|
1.0
|
C4B
|
1:CHL609
|
3.0
|
88.4
|
1.0
|
C4A
|
1:CHL609
|
3.0
|
88.4
|
1.0
|
C1B
|
1:CHL609
|
3.1
|
88.4
|
1.0
|
C1A
|
1:CHL609
|
3.1
|
88.4
|
1.0
|
C4C
|
1:CHL609
|
3.1
|
88.4
|
1.0
|
C1D
|
1:CHL609
|
3.1
|
88.4
|
1.0
|
CHC
|
1:CHL609
|
3.2
|
88.4
|
1.0
|
H272
|
1:LHG801
|
3.2
|
89.5
|
1.0
|
H251
|
1:LHG801
|
3.2
|
89.5
|
1.0
|
HA
|
1:PHE37
|
3.4
|
86.6
|
1.0
|
CHA
|
1:CHL609
|
3.4
|
88.4
|
1.0
|
CHB
|
1:CHL609
|
3.4
|
88.4
|
1.0
|
CHD
|
1:CHL609
|
3.5
|
88.4
|
1.0
|
HB2
|
1:PHE37
|
3.7
|
86.6
|
1.0
|
C
|
1:PHE37
|
3.8
|
86.6
|
1.0
|
H242
|
1:LHG801
|
3.9
|
89.5
|
1.0
|
H262
|
1:LHG801
|
4.0
|
89.5
|
1.0
|
CA
|
1:PHE37
|
4.0
|
86.6
|
1.0
|
C25
|
1:LHG801
|
4.0
|
89.5
|
1.0
|
C27
|
1:LHG801
|
4.0
|
89.5
|
1.0
|
C3D
|
1:CHL609
|
4.2
|
88.4
|
1.0
|
C2C
|
1:CHL609
|
4.2
|
88.4
|
1.0
|
C2B
|
1:CHL609
|
4.2
|
88.4
|
1.0
|
C3B
|
1:CHL609
|
4.2
|
88.4
|
1.0
|
C26
|
1:LHG801
|
4.2
|
89.5
|
1.0
|
H2
|
1:CHL609
|
4.3
|
88.4
|
1.0
|
C3C
|
1:CHL609
|
4.3
|
88.4
|
1.0
|
C2D
|
1:CHL609
|
4.3
|
88.4
|
1.0
|
CB
|
1:PHE37
|
4.3
|
86.6
|
1.0
|
H292
|
1:LHG801
|
4.3
|
89.5
|
1.0
|
C2A
|
1:CHL609
|
4.3
|
88.4
|
1.0
|
C3A
|
1:CHL609
|
4.4
|
88.4
|
1.0
|
H271
|
1:LHG801
|
4.4
|
89.5
|
1.0
|
H8
|
1:CHL609
|
4.4
|
88.4
|
1.0
|
C24
|
1:LHG801
|
4.5
|
89.5
|
1.0
|
H1
|
1:CHL609
|
4.5
|
88.4
|
1.0
|
H291
|
1:LHG801
|
4.6
|
89.5
|
1.0
|
HD2
|
1:PHE37
|
4.6
|
86.6
|
1.0
|
H3
|
1:CHL609
|
4.6
|
88.4
|
1.0
|
H252
|
1:LHG801
|
4.8
|
89.5
|
1.0
|
C29
|
1:LHG801
|
4.9
|
89.5
|
1.0
|
H241
|
1:LHG801
|
4.9
|
89.5
|
1.0
|
CBD
|
1:CHL609
|
4.9
|
88.4
|
1.0
|
H4
|
1:CHL609
|
4.9
|
88.4
|
1.0
|
CAA
|
1:CHL609
|
4.9
|
88.4
|
1.0
|
H68
|
1:CHL609
|
5.0
|
88.4
|
1.0
|
|
Magnesium binding site 10 out
of 145 in 6rhz
Go back to
Magnesium Binding Sites List in 6rhz
Magnesium binding site 10 out
of 145 in the Structure of A Minimal Photosystem I From A Green Alga
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 10 of Structure of A Minimal Photosystem I From A Green Alga within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
1:Mg610
b:0.5
occ:1.00
|
MG
|
1:CHL610
|
0.0
|
0.5
|
1.0
|
NB
|
1:CHL610
|
2.0
|
0.5
|
1.0
|
ND
|
1:CHL610
|
2.0
|
0.5
|
1.0
|
NA
|
1:CHL610
|
2.0
|
0.5
|
1.0
|
NC
|
1:CHL610
|
2.0
|
0.5
|
1.0
|
C1C
|
1:CHL610
|
2.9
|
0.5
|
1.0
|
C4D
|
1:CHL610
|
3.0
|
0.5
|
1.0
|
C4B
|
1:CHL610
|
3.0
|
0.5
|
1.0
|
C4A
|
1:CHL610
|
3.0
|
0.5
|
1.0
|
C1B
|
1:CHL610
|
3.1
|
0.5
|
1.0
|
C1A
|
1:CHL610
|
3.1
|
0.5
|
1.0
|
C4C
|
1:CHL610
|
3.1
|
0.5
|
1.0
|
C1D
|
1:CHL610
|
3.2
|
0.5
|
1.0
|
CHC
|
1:CHL610
|
3.2
|
0.5
|
1.0
|
CHB
|
1:CHL610
|
3.4
|
0.5
|
1.0
|
CHA
|
1:CHL610
|
3.4
|
0.5
|
1.0
|
CHD
|
1:CHL610
|
3.5
|
0.5
|
1.0
|
HMC1
|
1:CLA613
|
3.7
|
0.2
|
1.0
|
C3D
|
1:CHL610
|
4.2
|
0.5
|
1.0
|
HMC3
|
1:CLA613
|
4.2
|
0.2
|
1.0
|
C2C
|
1:CHL610
|
4.2
|
0.5
|
1.0
|
C2B
|
1:CHL610
|
4.3
|
0.5
|
1.0
|
C3B
|
1:CHL610
|
4.3
|
0.5
|
1.0
|
HG3
|
1:PRO104
|
4.3
|
0.7
|
1.0
|
C3C
|
1:CHL610
|
4.3
|
0.5
|
1.0
|
H2
|
1:CHL610
|
4.3
|
0.5
|
1.0
|
C2D
|
1:CHL610
|
4.3
|
0.5
|
1.0
|
C3A
|
1:CHL610
|
4.4
|
0.5
|
1.0
|
H182
|
1:XAT502
|
4.4
|
90.0
|
1.0
|
C2A
|
1:CHL610
|
4.4
|
0.5
|
1.0
|
CMC
|
1:CLA613
|
4.5
|
0.2
|
1.0
|
H1
|
1:CHL610
|
4.5
|
0.5
|
1.0
|
H9
|
1:CHL610
|
4.5
|
0.5
|
1.0
|
H3
|
1:CHL610
|
4.6
|
0.5
|
1.0
|
HMC2
|
1:CLA613
|
4.7
|
0.2
|
1.0
|
H68
|
1:CHL610
|
4.9
|
0.5
|
1.0
|
CBD
|
1:CHL610
|
4.9
|
0.5
|
1.0
|
|
Reference:
A.Perez Boerema,
D.Klaiman,
I.Caspy,
S.Y.Netzer-El,
A.Amunts,
N.Nelson.
Structure of A Minimal Photosystem I From A Green Alga To Be Published.
Page generated: Tue Oct 1 17:00:28 2024
|