Magnesium in PDB 6rid: Structure of Vaccinia Virus Dna-Dependent Rna Polymerase Elongation Complex

All present enzymatic activity of Structure of Vaccinia Virus Dna-Dependent Rna Polymerase Elongation Complex:
2.7.7.6;

The structure of Structure of Vaccinia Virus Dna-Dependent Rna Polymerase Elongation Complex also contains other interesting chemical elements:

Zinc

(Zn)

4 atoms

The binding sites of Magnesium atom in the Structure of Vaccinia Virus Dna-Dependent Rna Polymerase Elongation Complex (pdb code 6rid). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Structure of Vaccinia Virus Dna-Dependent Rna Polymerase Elongation Complex, PDB code: 6rid:

Magnesium binding site 1 out of 1 in the Structure of Vaccinia Virus Dna-Dependent Rna Polymerase Elongation Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of Vaccinia Virus Dna-Dependent Rna Polymerase Elongation Complex within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg1301 b:21.0 occ:1.00 OD1 A:ASP419 2.1 19.6 1.0 OD1 A:ASP417 2.1 18.9 1.0 O3' P:G30 2.2 32.1 1.0 CG A:ASP419 2.8 19.6 1.0 OD2 A:ASP419 2.9 19.6 1.0 CG A:ASP417 3.0 18.9 1.0 OD2 A:ASP417 3.3 18.9 1.0 CB A:ASP415 3.5 19.7 1.0 C3' P:G30 3.6 32.1 1.0 OD2 A:ASP415 4.0 19.7 1.0 C4' P:G30 4.1 32.1 1.0 N A:ASP415 4.2 19.7 1.0 CG A:ASP415 4.2 19.7 1.0 CA A:ASP415 4.2 19.7 1.0 O A:ASP415 4.2 19.7 1.0 CB A:ASP419 4.3 19.6 1.0 O2' P:G30 4.3 32.1 1.0 C A:ASP415 4.4 19.7 1.0 CB A:ASP417 4.4 18.9 1.0 C2' P:G30 4.5 32.1 1.0 C5' P:G30 4.6 32.1 1.0 N A:ASP419 4.6 19.6 1.0 N A:ASP417 4.6 18.9 1.0 CA A:ASP419 4.8 19.6 1.0 CA A:ASP417 4.9 18.9 1.0 C A:ASP417 4.9 18.9 1.0 N A:GLY418 5.0 19.1 1.0

H.S.Hillen, J.Bartuli, C.Grimm, C.Dienemann, K.Bedenk, A.A.Szalay, U.Fischer, P.Cramer. Structural Basis of Poxvirus Transcription: Transcribing and Capping Vaccinia Complexes. Cell V. 179 1525 2019.
ISSN: ISSN 1097-4172
PubMed: 31835031
DOI: 10.1016/J.CELL.2019.11.023