Magnesium in PDB 6rwt: Crystal Structure of the CBP3 Homolog From Brucella Abortus

The structure of Crystal Structure of the CBP3 Homolog From Brucella Abortus, PDB code: 6rwt was solved by G.Masuyer, M.Ndi, M.Ott, P.Stenmark, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	44.42 / 1.42
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	44.418, 55.909, 97.585, 90.00, 90.00, 90.00
R / Rfree (%)	16.8 / 20.1

The binding sites of Magnesium atom in the Crystal Structure of the CBP3 Homolog From Brucella Abortus (pdb code 6rwt). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Crystal Structure of the CBP3 Homolog From Brucella Abortus, PDB code: 6rwt:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Crystal Structure of the CBP3 Homolog From Brucella Abortus


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of the CBP3 Homolog From Brucella Abortus within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg201 b:45.6 occ:1.00 O A:HOH344 2.1 36.0 1.0 O A:HOH396 2.2 42.3 1.0 O A:HOH490 2.2 52.1 1.0 O A:HOH460 2.2 45.0 1.0 O A:HOH363 2.3 31.4 1.0 O A:HOH305 2.5 45.3 1.0 OG A:SER86 3.7 25.5 1.0 OD1 A:ASP82 3.7 25.0 0.5 O A:HOH304 4.2 40.8 1.0 OE1 A:GLU89 4.4 27.4 1.0 OE2 A:GLU89 4.5 27.9 1.0 O A:HOH315 4.7 34.1 1.0 O A:HOH428 4.7 32.0 1.0 CG A:ASP82 4.7 22.1 0.5 CD A:GLU89 4.8 24.7 1.0 O A:HOH486 4.8 32.7 1.0 CD2 A:HIS85 4.9 29.4 1.0 O A:HOH438 5.0 52.1 1.0

Magnesium binding site 2 out of 2 in the Crystal Structure of the CBP3 Homolog From Brucella Abortus


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Crystal Structure of the CBP3 Homolog From Brucella Abortus within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg202 b:22.8 occ:1.00 O A:HOH320 2.0 25.5 1.0 OE1 A:GLU74 2.1 19.5 1.0 O A:HOH362 2.1 22.6 1.0 O A:HOH489 2.1 25.4 1.0 O A:HOH383 2.2 21.9 1.0 O A:HOH341 2.2 20.9 1.0 CD A:GLU74 3.1 18.8 1.0 OE2 A:GLU74 3.5 19.6 1.0 OE2 A:GLU14 4.2 25.1 1.0 O A:HOH422 4.2 47.1 1.0 O A:HOH313 4.2 42.2 1.0 OD2 A:ASP77 4.2 27.6 1.0 OE2 A:GLU78 4.3 29.3 1.0 O A:HOH365 4.3 39.7 1.0 OE1 A:GLU14 4.4 21.1 1.0 O A:HOH488 4.4 27.1 1.0 CG A:GLU74 4.5 19.1 1.0 O A:HOH467 4.5 28.9 1.0 CD A:GLU14 4.7 21.6 1.0 CB A:GLU74 4.8 17.4 1.0

M.Ndi, G.Masuyer, H.Dawitz, A.Carlstrom, M.Michel, A.Elofsson, M.Rapp, P.Stenmark, M.Ott. Structural Basis For the Interaction of the Chaperone CBP3 with Newly Synthesized Cytochromebduring Mitochondrial Respiratory Chain Assembly. J.Biol.Chem. V. 294 16663 2019.
ISSN: ESSN 1083-351X
PubMed: 31537648
DOI: 10.1074/JBC.RA119.010483