Magnesium in PDB 6s2z: Water-Soluble Chlorophyll Protein (Wscp) From Brassica Oleracea Var. Botrytis with Chlorophyll-B

The structure of Water-Soluble Chlorophyll Protein (Wscp) From Brassica Oleracea Var. Botrytis with Chlorophyll-B, PDB code: 6s2z was solved by A.Agostini, E.Meneghin, L.Gewehr, D.Pedron, D.M.Palm, D.Carbonera, H.Paulsen, E.Jaenicke, E.Collini, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	19.72 / 2.50
Space group	C 2 2 2
Cell size a, b, c (Å), α, β, γ (°)	86.360, 118.330, 38.550, 90.00, 90.00, 90.00
R / Rfree (%)	21.8 / 28.4

The binding sites of Magnesium atom in the Water-Soluble Chlorophyll Protein (Wscp) From Brassica Oleracea Var. Botrytis with Chlorophyll-B (pdb code 6s2z). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Water-Soluble Chlorophyll Protein (Wscp) From Brassica Oleracea Var. Botrytis with Chlorophyll-B, PDB code: 6s2z:

Magnesium binding site 1 out of 1 in the Water-Soluble Chlorophyll Protein (Wscp) From Brassica Oleracea Var. Botrytis with Chlorophyll-B


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Water-Soluble Chlorophyll Protein (Wscp) From Brassica Oleracea Var. Botrytis with Chlorophyll-B within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg1001 b:13.5 occ:1.00 MG A:CHL1001 0.0 13.5 1.0 NA A:CHL1001 2.0 12.0 1.0 ND A:CHL1001 2.0 12.1 1.0 NB A:CHL1001 2.1 13.4 1.0 NC A:CHL1001 2.1 12.9 1.0 O A:PRO32 2.2 10.1 1.0 C4D A:CHL1001 2.9 11.5 1.0 C1A A:CHL1001 3.0 12.5 1.0 C4A A:CHL1001 3.0 12.1 1.0 C4B A:CHL1001 3.1 13.5 1.0 C1C A:CHL1001 3.1 13.4 1.0 C1B A:CHL1001 3.1 13.0 1.0 C4C A:CHL1001 3.1 12.6 1.0 C1D A:CHL1001 3.1 12.0 1.0 C A:PRO32 3.3 9.6 1.0 CHB A:CHL1001 3.4 11.7 1.0 CHC A:CHL1001 3.4 13.4 1.0 CHA A:CHL1001 3.4 12.1 1.0 CHD A:CHL1001 3.5 11.4 1.0 N A:ALA33 4.1 9.2 1.0 CA A:ALA33 4.1 10.5 1.0 C3D A:CHL1001 4.1 11.7 1.0 C2A A:CHL1001 4.3 12.2 1.0 C3A A:CHL1001 4.3 12.1 1.0 CA A:PRO32 4.3 9.4 1.0 CB A:PRO32 4.3 8.4 1.0 C3B A:CHL1001 4.3 12.0 1.0 C2D A:CHL1001 4.4 11.2 1.0 C2C A:CHL1001 4.4 14.0 1.0 C2B A:CHL1001 4.4 12.5 1.0 C3C A:CHL1001 4.4 12.1 1.0 CB A:ALA33 4.5 9.7 1.0 N A:PRO32 4.5 9.8 1.0 CD A:PRO32 4.7 8.9 1.0 CG2 A:VAL31 4.7 8.5 1.0 CBD A:CHL1001 4.9 11.7 1.0 CB A:VAL31 4.9 10.0 1.0 CG A:PRO32 5.0 9.7 1.0

A.Agostini, E.Meneghin, L.Gewehr, D.Pedron, D.M.Palm, D.Carbonera, H.Paulsen, E.Jaenicke, E.Collini. How Water-Mediated Hydrogen Bonds Affect Chlorophyll A/B Selectivity in Water-Soluble Chlorophyll Protein. Sci Rep V. 9 18255 2019.
ISSN: ESSN 2045-2322
PubMed: 31796824
DOI: 10.1038/S41598-019-54520-4