Magnesium in PDB 6scb: Crystal Structure of A Shortened Ipgc Variant with Two Bound Magnesium and Two Bound Chlorine Atoms Each

The structure of Crystal Structure of A Shortened Ipgc Variant with Two Bound Magnesium and Two Bound Chlorine Atoms Each, PDB code: 6scb was solved by M.Ley, A.Heine, G.Klebe, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	47.59 / 1.58
Space group	P 32 2 1
Cell size a, b, c (Å), α, β, γ (°)	57.554, 57.554, 159.979, 90.00, 90.00, 120.00
R / Rfree (%)	17.5 / 21.5

The structure of Crystal Structure of A Shortened Ipgc Variant with Two Bound Magnesium and Two Bound Chlorine Atoms Each also contains other interesting chemical elements:

Chlorine

(Cl)

2 atoms

The binding sites of Magnesium atom in the Crystal Structure of A Shortened Ipgc Variant with Two Bound Magnesium and Two Bound Chlorine Atoms Each (pdb code 6scb). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Crystal Structure of A Shortened Ipgc Variant with Two Bound Magnesium and Two Bound Chlorine Atoms Each, PDB code: 6scb:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Crystal Structure of A Shortened Ipgc Variant with Two Bound Magnesium and Two Bound Chlorine Atoms Each


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of A Shortened Ipgc Variant with Two Bound Magnesium and Two Bound Chlorine Atoms Each within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg201 b:25.0 occ:0.85 O B:HOH421 2.0 28.4 0.8 O B:HOH318 2.1 25.2 0.8 O B:HOH350 2.1 24.6 0.8 O B:HOH395 2.1 24.6 0.8 O B:HOH308 2.1 20.9 0.8 O B:HOH330 2.3 22.2 0.8 HZ2 B:LYS140 3.1 21.7 1.0 NZ B:LYS140 3.9 18.1 1.0 OD1 B:ASN135 4.0 31.9 1.0 O B:SER134 4.0 21.7 1.0 O B:HOH352 4.1 26.1 1.0 O B:HOH311 4.1 22.1 1.0 HZ1 B:LYS140 4.1 21.7 1.0 O B:GLN132 4.1 23.3 1.0 HZ3 B:LYS140 4.3 21.7 1.0 O B:HOH414 4.4 23.8 1.0 O B:ILE131 4.5 21.9 1.0 HA B:ASN135 4.7 25.4 1.0 HE3 B:LYS140 4.7 27.6 1.0 HD2 B:LYS140 4.8 28.3 1.0 C B:GLN132 4.8 21.2 1.0 CE B:LYS140 4.9 22.9 1.0

Magnesium binding site 2 out of 2 in the Crystal Structure of A Shortened Ipgc Variant with Two Bound Magnesium and Two Bound Chlorine Atoms Each


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Crystal Structure of A Shortened Ipgc Variant with Two Bound Magnesium and Two Bound Chlorine Atoms Each within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg202 b:21.0 occ:0.50 O B:HOH408 1.9 20.0 0.5 O B:HOH375 1.9 18.3 0.5 O A:HOH403 1.9 21.5 0.5 O B:HOH405 2.1 18.2 0.5 O A:HOH404 2.2 21.7 0.5 O B:HOH301 2.2 20.0 0.5 HA B:SER21 4.0 57.8 1.0 HG3 A:GLN88 4.0 49.8 1.0 HG23 B:THR24 4.1 32.9 1.0 HG2 A:GLN88 4.1 49.8 1.0 O A:HOH336 4.1 30.3 1.0 O B:GLY22 4.1 59.3 1.0 OD2 B:ASP27 4.1 32.0 1.0 O B:HOH420 4.2 31.6 1.0 O B:HOH362 4.2 24.6 1.0 O A:HOH340 4.3 23.2 1.0 OD1 B:ASP27 4.5 32.3 1.0 HG21 B:THR24 4.5 32.9 1.0 CG A:GLN88 4.5 41.5 1.0 O B:HOH410 4.6 39.4 1.0 CG B:ASP27 4.8 44.8 1.0 CG2 B:THR24 4.8 27.4 1.0 CA B:SER21 4.8 48.1 1.0 HA B:ALA18 4.8 21.6 1.0 C B:SER21 5.0 69.3 1.0

M.Ley, A.Heine, G.Klebe. Crystal Structure of A Shortened Ipgc Variant with Two Bound Magnesium and Two Bound Chlorine Atoms Each To Be Published.