Magnesium in PDB 6sl5: Dunaliella Photosystem I Supercomplex

All present enzymatic activity of Dunaliella Photosystem I Supercomplex:
1.97.1.12;

The structure of Dunaliella Photosystem I Supercomplex also contains other interesting chemical elements:

Iron	(Fe)	12 atoms
Calcium	(Ca)	1 atom

Pages:

>>> Page 1 <<< Page 2, Binding sites: 11 - 20; Page 3, Binding sites: 21 - 30; Page 4, Binding sites: 31 - 40; Page 5, Binding sites: 41 - 50; Page 6, Binding sites: 51 - 60; Page 7, Binding sites: 61 - 70; Page 8, Binding sites: 71 - 80; Page 9, Binding sites: 81 - 90; Page 10, Binding sites: 91 - 100; Page 11, Binding sites: 101 - 110; Page 12, Binding sites: 111 - 120; Page 13, Binding sites: 121 - 130; Page 14, Binding sites: 131 - 140; Page 15, Binding sites: 141 - 150; Page 16, Binding sites: 151 - 160; Page 17, Binding sites: 161 - 170; Page 18, Binding sites: 171 - 180; Page 19, Binding sites: 181 - 186;

Binding sites:

The binding sites of Magnesium atom in the Dunaliella Photosystem I Supercomplex (pdb code 6sl5). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 186 binding sites of Magnesium where determined in the Dunaliella Photosystem I Supercomplex, PDB code: 6sl5:
Jump to Magnesium binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Magnesium binding site 1 out of 186 in the Dunaliella Photosystem I Supercomplex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Dunaliella Photosystem I Supercomplex within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg1011 b:0.0 occ:1.00 MG A:CL01011 0.0 0.0 1.0 ND A:CL01011 2.0 0.0 1.0 NB A:CL01011 2.1 0.0 1.0 NC A:CL01011 2.1 0.0 1.0 NA A:CL01011 2.3 0.0 1.0 C4D A:CL01011 3.0 0.0 1.0 NE2 A:HIS676 3.0 0.0 1.0 C4B A:CL01011 3.0 0.0 1.0 C1B A:CL01011 3.1 0.0 1.0 C1C A:CL01011 3.1 0.0 1.0 C1D A:CL01011 3.2 0.0 1.0 C4A A:CL01011 3.2 0.0 1.0 C4C A:CL01011 3.2 0.0 1.0 C1A A:CL01011 3.2 0.0 1.0 CHC A:CL01011 3.3 0.0 1.0 CHB A:CL01011 3.4 0.0 1.0 CHA A:CL01011 3.5 0.0 1.0 CHD A:CL01011 3.6 0.0 1.0 CE1 A:HIS676 3.8 0.0 1.0 CD2 A:HIS676 4.1 0.0 1.0 CHC B:CLA1021 4.2 0.0 1.0 C3D A:CL01011 4.2 0.0 1.0 C4B B:CLA1021 4.2 0.0 1.0 C3B A:CL01011 4.3 0.0 1.0 C3B B:CLA1021 4.3 0.0 1.0 CAB B:CLA1021 4.3 0.0 1.0 C2B A:CL01011 4.4 0.0 1.0 C2D A:CL01011 4.4 0.0 1.0 C2C A:CL01011 4.4 0.0 1.0 C3C A:CL01011 4.5 0.0 1.0 C3A A:CL01011 4.5 0.0 1.0 C2A A:CL01011 4.6 0.0 1.0 C1C B:CLA1021 4.7 0.0 1.0 NB B:CLA1021 4.8 0.0 1.0 CZ A:PHE672 5.0 0.0 1.0 C2B B:CLA1021 5.0 0.0 1.0 ND1 A:HIS676 5.0 0.0 1.0

Magnesium binding site 2 out of 186 in the Dunaliella Photosystem I Supercomplex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Dunaliella Photosystem I Supercomplex within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg1012 b:0.0 occ:1.00 MG A:CLA1012 0.0 0.0 1.0 ND A:CLA1012 2.0 0.0 1.0 NB A:CLA1012 2.0 0.0 1.0 NC A:CLA1012 2.1 0.0 1.0 NA A:CLA1012 2.2 0.0 1.0 C4D A:CLA1012 2.9 0.0 1.0 C4B A:CLA1012 3.0 0.0 1.0 C1C A:CLA1012 3.0 0.0 1.0 C1B A:CLA1012 3.1 0.0 1.0 C1D A:CLA1012 3.1 0.0 1.0 CBB A:CLA1013 3.1 0.0 1.0 C4A A:CLA1012 3.2 0.0 1.0 C1A A:CLA1012 3.2 0.0 1.0 C4C A:CLA1012 3.2 0.0 1.0 CHC A:CLA1012 3.3 0.0 1.0 CHB A:CLA1012 3.4 0.0 1.0 CHA A:CLA1012 3.5 0.0 1.0 CHD A:CLA1012 3.6 0.0 1.0 CAB A:CLA1013 4.1 0.0 1.0 C3D A:CLA1012 4.2 0.0 1.0 C3B A:CLA1012 4.2 0.0 1.0 C2B A:CLA1012 4.3 0.0 1.0 C2D A:CLA1012 4.3 0.0 1.0 CB A:ALA680 4.4 0.0 1.0 C2C A:CLA1012 4.4 0.0 1.0 C3C A:CLA1012 4.4 0.0 1.0 OD1 B:ASN586 4.4 0.0 1.0 C3A A:CLA1012 4.5 0.0 1.0 C2A A:CLA1012 4.5 0.0 1.0 C4 B:CLA1021 4.7 0.0 1.0 C3B A:CLA1013 4.9 0.0 1.0 CZ2 B:TRP590 4.9 0.0 1.0 CBD A:CLA1012 4.9 0.0 1.0

Magnesium binding site 3 out of 186 in the Dunaliella Photosystem I Supercomplex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of Dunaliella Photosystem I Supercomplex within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg1013 b:0.0 occ:1.00 MG A:CLA1013 0.0 0.0 1.0 ND A:CLA1013 2.0 0.0 1.0 NB A:CLA1013 2.0 0.0 1.0 NC A:CLA1013 2.1 0.0 1.0 NA A:CLA1013 2.2 0.0 1.0 C4D A:CLA1013 2.9 0.0 1.0 C4B A:CLA1013 3.0 0.0 1.0 C1B A:CLA1013 3.0 0.0 1.0 C1C A:CLA1013 3.0 0.0 1.0 C1D A:CLA1013 3.1 0.0 1.0 C4A A:CLA1013 3.1 0.0 1.0 C4C A:CLA1013 3.1 0.0 1.0 C1A A:CLA1013 3.2 0.0 1.0 CHC A:CLA1013 3.3 0.0 1.0 SD A:MET684 3.3 0.0 1.0 CHB A:CLA1013 3.4 0.0 1.0 CHA A:CLA1013 3.5 0.0 1.0 CHD A:CLA1013 3.5 0.0 1.0 NE1 B:TRP583 3.5 0.0 1.0 CG A:MET684 3.6 0.0 1.0 CZ2 B:TRP583 3.9 0.0 1.0 CE2 B:TRP583 4.1 0.0 1.0 C3D A:CLA1013 4.1 0.0 1.0 CB A:MET684 4.2 0.0 1.0 C3B A:CLA1013 4.2 0.0 1.0 C2B A:CLA1013 4.3 0.0 1.0 C2D A:CLA1013 4.3 0.0 1.0 C2C A:CLA1013 4.3 0.0 1.0 C3C A:CLA1013 4.4 0.0 1.0 C3A A:CLA1013 4.4 0.0 1.0 C2A A:CLA1013 4.5 0.0 1.0 CD1 B:TRP583 4.7 0.0 1.0 CMC A:CLA1012 4.9 0.0 1.0 CBD A:CLA1013 4.9 0.0 1.0 CE A:MET684 5.0 0.0 1.0

Magnesium binding site 4 out of 186 in the Dunaliella Photosystem I Supercomplex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 4 of Dunaliella Photosystem I Supercomplex within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg1101 b:0.0 occ:1.00 MG A:CLA1101 0.0 0.0 1.0 ND A:CLA1101 2.0 0.0 1.0 NB A:CLA1101 2.0 0.0 1.0 NC A:CLA1101 2.1 0.0 1.0 NA A:CLA1101 2.2 0.0 1.0 C4D A:CLA1101 2.9 0.0 1.0 C4B A:CLA1101 3.0 0.0 1.0 NE2 A:HIS53 3.0 0.0 1.0 C1C A:CLA1101 3.0 0.0 1.0 C1B A:CLA1101 3.1 0.0 1.0 C1D A:CLA1101 3.1 0.0 1.0 C4A A:CLA1101 3.2 0.0 1.0 C4C A:CLA1101 3.2 0.0 1.0 C1A A:CLA1101 3.2 0.0 1.0 CHC A:CLA1101 3.3 0.0 1.0 CHB A:CLA1101 3.4 0.0 1.0 CHA A:CLA1101 3.5 0.0 1.0 CHD A:CLA1101 3.5 0.0 1.0 C39 J:BCR4002 3.5 0.0 1.0 CE1 A:HIS53 3.9 0.0 1.0 CD2 A:HIS53 3.9 0.0 1.0 C3D A:CLA1101 4.1 0.0 1.0 C3B A:CLA1101 4.2 0.0 1.0 CB J:ALA11 4.2 0.0 1.0 C2B A:CLA1101 4.3 0.0 1.0 C2D A:CLA1101 4.3 0.0 1.0 C2C A:CLA1101 4.4 0.0 1.0 C3C A:CLA1101 4.4 0.0 1.0 C3A A:CLA1101 4.5 0.0 1.0 C2A A:CLA1101 4.5 0.0 1.0 C30 J:BCR4002 4.7 0.0 1.0 C29 J:BCR4002 4.8 0.0 1.0 CBD A:CLA1101 4.9 0.0 1.0

Magnesium binding site 5 out of 186 in the Dunaliella Photosystem I Supercomplex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 5 of Dunaliella Photosystem I Supercomplex within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg1102 b:0.0 occ:1.00 MG A:CLA1102 0.0 0.0 1.0 ND A:CLA1102 2.0 0.0 1.0 NB A:CLA1102 2.0 0.0 1.0 NC A:CLA1102 2.1 0.0 1.0 NA A:CLA1102 2.2 0.0 1.0 C4D A:CLA1102 2.9 0.0 1.0 C4B A:CLA1102 3.0 0.0 1.0 C1C A:CLA1102 3.0 0.0 1.0 C1B A:CLA1102 3.1 0.0 1.0 NE2 A:HIS57 3.1 0.0 1.0 C1D A:CLA1102 3.1 0.0 1.0 C4A A:CLA1102 3.1 0.0 1.0 C4C A:CLA1102 3.2 0.0 1.0 C1A A:CLA1102 3.2 0.0 1.0 CHC A:CLA1102 3.3 0.0 1.0 CHB A:CLA1102 3.4 0.0 1.0 CHA A:CLA1102 3.5 0.0 1.0 CHD A:CLA1102 3.5 0.0 1.0 C7 A:CLA1109 3.9 0.0 1.0 CE1 A:HIS57 4.0 0.0 1.0 CD2 A:HIS57 4.1 0.0 1.0 C3D A:CLA1102 4.1 0.0 1.0 C3B A:CLA1102 4.2 0.0 1.0 C2B A:CLA1102 4.3 0.0 1.0 C2D A:CLA1102 4.3 0.0 1.0 C2C A:CLA1102 4.4 0.0 1.0 C3C A:CLA1102 4.4 0.0 1.0 C3A A:CLA1102 4.4 0.0 1.0 C2A A:CLA1102 4.5 0.0 1.0 C10 A:CLA1109 4.7 0.0 1.0 C5 A:CLA1109 4.8 0.0 1.0 C8 A:CLA1109 4.9 0.0 1.0 CBD A:CLA1102 4.9 0.0 1.0 C6 A:CLA1109 5.0 0.0 1.0

Magnesium binding site 6 out of 186 in the Dunaliella Photosystem I Supercomplex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 6 of Dunaliella Photosystem I Supercomplex within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg1103 b:0.0 occ:1.00 MG A:CLA1103 0.0 0.0 1.0 ND A:CLA1103 2.0 0.0 1.0 NB A:CLA1103 2.0 0.0 1.0 NC A:CLA1103 2.1 0.0 1.0 NA A:CLA1103 2.2 0.0 1.0 C4D A:CLA1103 2.9 0.0 1.0 C4B A:CLA1103 3.0 0.0 1.0 C1C A:CLA1103 3.0 0.0 1.0 NE2 A:HIS77 3.1 0.0 1.0 C1B A:CLA1103 3.1 0.0 1.0 C1D A:CLA1103 3.1 0.0 1.0 C4A A:CLA1103 3.1 0.0 1.0 C1A A:CLA1103 3.1 0.0 1.0 C4C A:CLA1103 3.2 0.0 1.0 CHC A:CLA1103 3.3 0.0 1.0 CMB A:CLA1128 3.4 0.0 1.0 CD2 A:HIS77 3.4 0.0 1.0 CHA A:CLA1103 3.4 0.0 1.0 CHB A:CLA1103 3.4 0.0 1.0 CHD A:CLA1103 3.5 0.0 1.0 C3D A:CLA1103 4.1 0.0 1.0 C3B A:CLA1103 4.2 0.0 1.0 C2B A:CLA1103 4.3 0.0 1.0 C2D A:CLA1103 4.3 0.0 1.0 CE1 A:HIS77 4.3 0.0 1.0 C2C A:CLA1103 4.3 0.0 1.0 C3C A:CLA1103 4.4 0.0 1.0 C2A A:CLA1103 4.5 0.0 1.0 C3A A:CLA1103 4.5 0.0 1.0 CG A:HIS77 4.7 0.0 1.0 CBB A:CLA1128 4.7 0.0 1.0 C2B A:CLA1128 4.8 0.0 1.0 CBD A:CLA1103 4.9 0.0 1.0

Magnesium binding site 7 out of 186 in the Dunaliella Photosystem I Supercomplex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 7 of Dunaliella Photosystem I Supercomplex within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg1104 b:0.0 occ:1.00 MG A:CLA1104 0.0 0.0 1.0 ND A:CLA1104 2.0 0.0 1.0 NB A:CLA1104 2.0 0.0 1.0 NC A:CLA1104 2.1 0.0 1.0 NA A:CLA1104 2.2 0.0 1.0 C4D A:CLA1104 2.9 0.0 1.0 C4B A:CLA1104 3.0 0.0 1.0 C1C A:CLA1104 3.0 0.0 1.0 C1B A:CLA1104 3.0 0.0 1.0 C1D A:CLA1104 3.1 0.0 1.0 OE1 A:GLN80 3.1 0.0 1.0 C4A A:CLA1104 3.1 0.0 1.0 C4C A:CLA1104 3.2 0.0 1.0 C1A A:CLA1104 3.2 0.0 1.0 CHC A:CLA1104 3.3 0.0 1.0 CHB A:CLA1104 3.4 0.0 1.0 CHA A:CLA1104 3.5 0.0 1.0 CHD A:CLA1104 3.5 0.0 1.0 C16 A:CLA1104 3.6 0.0 1.0 CD A:GLN80 3.7 0.0 1.0 NE2 A:GLN80 3.8 0.0 1.0 C3D A:CLA1104 4.1 0.0 1.0 C3B A:CLA1104 4.2 0.0 1.0 C20 A:CLA1104 4.2 0.0 1.0 C2B A:CLA1104 4.3 0.0 1.0 C2D A:CLA1104 4.3 0.0 1.0 C2C A:CLA1104 4.4 0.0 1.0 C3C A:CLA1104 4.4 0.0 1.0 C18 A:CLA1104 4.4 0.0 1.0 C3A A:CLA1104 4.5 0.0 1.0 C2A A:CLA1104 4.5 0.0 1.0 C17 A:CLA1104 4.6 0.0 1.0 C15 A:CLA1104 4.7 0.0 1.0 CG A:GLN80 4.9 0.0 1.0 CBD A:CLA1104 4.9 0.0 1.0

Magnesium binding site 8 out of 186 in the Dunaliella Photosystem I Supercomplex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 8 of Dunaliella Photosystem I Supercomplex within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg1105 b:0.0 occ:1.00 MG A:CLA1105 0.0 0.0 1.0 ND A:CLA1105 2.0 0.0 1.0 NB A:CLA1105 2.0 0.0 1.0 NC A:CLA1105 2.1 0.0 1.0 NA A:CLA1105 2.2 0.0 1.0 C4D A:CLA1105 2.9 0.0 1.0 C4B A:CLA1105 3.0 0.0 1.0 NE2 A:HIS94 3.0 0.0 1.0 C1C A:CLA1105 3.0 0.0 1.0 C1B A:CLA1105 3.1 0.0 1.0 C1D A:CLA1105 3.1 0.0 1.0 C4A A:CLA1105 3.2 0.0 1.0 C4C A:CLA1105 3.2 0.0 1.0 C1A A:CLA1105 3.2 0.0 1.0 CHC A:CLA1105 3.3 0.0 1.0 CHA A:CLA1105 3.4 0.0 1.0 CHB A:CLA1105 3.4 0.0 1.0 CHD A:CLA1105 3.5 0.0 1.0 CD2 A:HIS94 3.7 0.0 1.0 C9 A:LMU5004 3.9 0.0 1.0 CE1 A:HIS94 4.0 0.0 1.0 C7 A:LMU5004 4.1 0.0 1.0 C3D A:CLA1105 4.1 0.0 1.0 C3B A:CLA1105 4.2 0.0 1.0 C2D A:CLA1105 4.3 0.0 1.0 C2B A:CLA1105 4.3 0.0 1.0 C2C A:CLA1105 4.4 0.0 1.0 C3C A:CLA1105 4.4 0.0 1.0 C3A A:CLA1105 4.5 0.0 1.0 C6 A:LMU5004 4.5 0.0 1.0 C8 A:LMU5004 4.5 0.0 1.0 C2A A:CLA1105 4.5 0.0 1.0 CBD A:CLA1105 4.9 0.0 1.0 CG A:HIS94 4.9 0.0 1.0

Magnesium binding site 9 out of 186 in the Dunaliella Photosystem I Supercomplex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 9 of Dunaliella Photosystem I Supercomplex within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg1106 b:0.0 occ:1.00 MG A:CLA1106 0.0 0.0 1.0 ND A:CLA1106 2.0 0.0 1.0 NB A:CLA1106 2.0 0.0 1.0 NC A:CLA1106 2.1 0.0 1.0 NA A:CLA1106 2.2 0.0 1.0 C4D A:CLA1106 2.9 0.0 1.0 C4B A:CLA1106 3.0 0.0 1.0 C1C A:CLA1106 3.0 0.0 1.0 C1B A:CLA1106 3.1 0.0 1.0 OE1 A:GLN116 3.1 0.0 1.0 C1D A:CLA1106 3.1 0.0 1.0 C4A A:CLA1106 3.1 0.0 1.0 C4C A:CLA1106 3.2 0.0 1.0 C1A A:CLA1106 3.2 0.0 1.0 CHC A:CLA1106 3.3 0.0 1.0 CHB A:CLA1106 3.4 0.0 1.0 CHA A:CLA1106 3.5 0.0 1.0 CHD A:CLA1106 3.5 0.0 1.0 NE2 A:GLN116 3.7 0.0 1.0 CD A:GLN116 3.8 0.0 1.0 C3D A:CLA1106 4.1 0.0 1.0 C3B A:CLA1106 4.2 0.0 1.0 C2D A:CLA1106 4.3 0.0 1.0 C2B A:CLA1106 4.3 0.0 1.0 C6 A:CLA1126 4.3 0.0 1.0 C2C A:CLA1106 4.4 0.0 1.0 C3C A:CLA1106 4.4 0.0 1.0 C3A A:CLA1106 4.5 0.0 1.0 C2A A:CLA1106 4.5 0.0 1.0 C2 A:CLA1126 4.6 0.0 1.0 C3 A:CLA1126 4.8 0.0 1.0 CBD A:CLA1106 4.9 0.0 1.0 C1 A:CLA1126 5.0 0.0 1.0

Magnesium binding site 10 out of 186 in the Dunaliella Photosystem I Supercomplex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 10 of Dunaliella Photosystem I Supercomplex within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg1107 b:0.0 occ:1.00 MG A:CLA1107 0.0 0.0 1.0 ND A:CLA1107 2.0 0.0 1.0 NB A:CLA1107 2.0 0.0 1.0 NC A:CLA1107 2.1 0.0 1.0 NA A:CLA1107 2.2 0.0 1.0 C4D A:CLA1107 2.9 0.0 1.0 NE2 A:GLN124 3.0 0.0 1.0 C4B A:CLA1107 3.0 0.0 1.0 C1C A:CLA1107 3.0 0.0 1.0 C1B A:CLA1107 3.1 0.0 1.0 C1D A:CLA1107 3.1 0.0 1.0 C4A A:CLA1107 3.2 0.0 1.0 C1A A:CLA1107 3.2 0.0 1.0 C4C A:CLA1107 3.2 0.0 1.0 CHC A:CLA1107 3.3 0.0 1.0 CHB A:CLA1107 3.4 0.0 1.0 CHA A:CLA1107 3.5 0.0 1.0 CD A:GLN124 3.5 0.0 1.0 CHD A:CLA1107 3.6 0.0 1.0 OE1 A:GLN124 3.7 0.0 1.0 C3D A:CLA1107 4.2 0.0 1.0 C3B A:CLA1107 4.2 0.0 1.0 C2B A:CLA1107 4.3 0.0 1.0 C16 A:CLA1126 4.3 0.0 1.0 C2D A:CLA1107 4.3 0.0 1.0 C2C A:CLA1107 4.4 0.0 1.0 C3C A:CLA1107 4.4 0.0 1.0 C3A A:CLA1107 4.5 0.0 1.0 C2A A:CLA1107 4.5 0.0 1.0 CG A:GLN124 4.7 0.0 1.0 C18 A:CLA1126 4.7 0.0 1.0 C17 A:CLA1126 4.9 0.0 1.0 CBD A:CLA1107 4.9 0.0 1.0 CBB A:CLA1106 5.0 0.0 1.0

N.Nelson, I.Caspy, T.Malavath, D.Klaiman, Y.Shkolinsky. Structure and Energy Transfer Pathways of the Dunaliella Photosystem I Supercomplex To Be Published.