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Magnesium in PDB 6syu: The Wild Type Glucuronoyl Esterase OTCE15A From Opitutus Terrae in Complex with Xylobiose

Protein crystallography data

The structure of The Wild Type Glucuronoyl Esterase OTCE15A From Opitutus Terrae in Complex with Xylobiose, PDB code: 6syu was solved by S.Mazurkewich, J.C.Navarro Poulsen, J.Larsbrink, L.Lo Leggio, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 41.58 / 1.33
Space group P 1
Cell size a, b, c (Å), α, β, γ (°) 43.686, 44.340, 50.979, 77.24, 67.27, 70.58
R / Rfree (%) 12 / 14.5

Magnesium Binding Sites:

The binding sites of Magnesium atom in the The Wild Type Glucuronoyl Esterase OTCE15A From Opitutus Terrae in Complex with Xylobiose (pdb code 6syu). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the The Wild Type Glucuronoyl Esterase OTCE15A From Opitutus Terrae in Complex with Xylobiose, PDB code: 6syu:

Magnesium binding site 1 out of 1 in 6syu

Go back to Magnesium Binding Sites List in 6syu
Magnesium binding site 1 out of 1 in the The Wild Type Glucuronoyl Esterase OTCE15A From Opitutus Terrae in Complex with Xylobiose


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of The Wild Type Glucuronoyl Esterase OTCE15A From Opitutus Terrae in Complex with Xylobiose within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg505

b:10.8
occ:1.00
O A:HOH748 2.3 14.6 1.0
O A:GLU305 2.3 10.2 1.0
O A:HIS303 2.3 11.3 1.0
O A:HOH1047 2.4 16.1 1.0
O A:HOH980 2.4 11.6 1.0
O A:HOH649 2.6 17.3 1.0
H A:HIS303 3.2 14.4 1.0
C A:GLU305 3.5 9.7 1.0
HB2 A:ASP360 3.5 11.1 1.0
C A:HIS303 3.5 9.7 1.0
HB2 A:CYS293 3.6 10.7 1.0
HA A:THR306 3.9 11.4 1.0
N A:GLU305 3.9 9.7 1.0
HB3 A:ASP360 3.9 11.1 1.0
H A:GLU305 4.0 11.7 1.0
N A:HIS303 4.0 12.0 1.0
HB3 A:GLU305 4.1 10.4 1.0
CB A:ASP360 4.1 9.3 1.0
C A:GLY304 4.2 12.1 1.0
HB2 A:ALA297 4.2 11.8 1.0
CA A:GLU305 4.2 9.5 1.0
HB3 A:HIS303 4.2 13.2 1.0
O A:ARG301 4.3 14.6 0.5
HG A:CYS293 4.3 12.9 1.0
CA A:HIS303 4.3 10.1 1.0
HA3 A:GLY304 4.3 11.4 1.0
O A:LEU298 4.3 11.9 1.0
CB A:CYS293 4.4 8.9 1.0
HB3 A:ALA297 4.5 11.8 1.0
OD2 A:ASP360 4.5 9.3 1.0
N A:THR306 4.5 9.6 1.0
HA A:CYS293 4.5 9.9 1.0
O A:HOH692 4.5 15.7 1.0
N A:GLY304 4.5 10.1 1.0
HA A:SER299 4.6 12.2 1.0
CA A:GLY304 4.6 9.5 1.0
O A:GLY304 4.6 11.6 1.0
CA A:THR306 4.7 9.5 1.0
HG21 A:THR306 4.7 17.3 1.0
O A:TRP358 4.7 8.4 1.0
CB A:GLU305 4.7 8.7 1.0
SG A:CYS293 4.8 10.7 1.0
CB A:ALA297 4.8 9.8 1.0
CG A:ASP360 4.8 9.8 1.0
CB A:HIS303 4.8 10.9 1.0
CA A:CYS293 4.9 8.2 1.0
C A:ILE302 5.0 13.9 0.5

Reference:

S.Mazurkewich, J.C.Navarro Poulsen, J.Larsbrink, L.Lo Leggio. The Wild Type Glucuronoyl Esterase OTCE15A From Opitutus Terrae in Complex with Xylobiose To Be Published.
Page generated: Tue Oct 1 18:29:16 2024

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