Magnesium in PDB 6tfk: VIP3AA Toxin Structure

The binding sites of Magnesium atom in the VIP3AA Toxin Structure (pdb code 6tfk). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the VIP3AA Toxin Structure, PDB code: 6tfk:

Magnesium binding site 1 out of 1 in the VIP3AA Toxin Structure


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of VIP3AA Toxin Structure within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg1000 b:46.3 occ:1.00 HD22 A:ASN163 2.5 17.1 1.0 HD22 C:ASN163 2.5 23.9 1.0 HD22 B:ASN163 2.5 46.3 1.0 HD22 D:ASN163 2.5 46.3 1.0 ND2 A:ASN163 3.3 17.1 1.0 ND2 B:ASN163 3.3 46.3 1.0 ND2 C:ASN163 3.3 23.9 1.0 ND2 D:ASN163 3.3 46.3 1.0 HD21 B:ASN163 3.7 46.3 1.0 HD21 A:ASN163 3.7 17.1 1.0 HD21 C:ASN163 3.7 23.9 1.0 HD21 D:ASN163 3.7 46.3 1.0 HG22 D:VAL160 3.8 17.5 1.0 HG22 A:VAL160 3.8 16.2 1.0 HG22 B:VAL160 3.8 17.6 1.0 HG22 C:VAL160 3.8 19.4 1.0 HG13 C:VAL160 3.8 19.4 1.0 HG13 D:VAL160 3.8 17.5 1.0 HG13 A:VAL160 3.8 16.2 1.0 HG13 B:VAL160 3.8 17.6 1.0 HB3 C:ASN163 3.9 23.9 1.0 HB3 A:ASN163 3.9 17.1 1.0 HB3 B:ASN163 3.9 46.3 1.0 HB3 D:ASN163 3.9 46.3 1.0 HB2 A:ASN163 3.9 17.1 1.0 HB2 C:ASN163 3.9 23.9 1.0 HB2 D:ASN163 3.9 46.3 1.0 HB2 B:ASN163 3.9 46.3 1.0 HA D:VAL160 4.2 17.5 1.0 HA A:VAL160 4.2 16.2 1.0 HA B:VAL160 4.2 17.6 1.0 HA C:VAL160 4.2 19.4 1.0 CG A:ASN163 4.2 17.1 1.0 CG B:ASN163 4.2 46.3 1.0 CG C:ASN163 4.2 23.9 1.0 CG D:ASN163 4.2 46.3 1.0 CB A:ASN163 4.2 17.1 1.0 CB C:ASN163 4.2 23.9 1.0 CB B:ASN163 4.2 46.3 1.0 CB D:ASN163 4.2 46.3 1.0 CG1 D:VAL160 4.7 17.5 1.0 CG1 C:VAL160 4.7 19.4 1.0 CG2 D:VAL160 4.7 17.5 1.0 CG2 A:VAL160 4.7 16.2 1.0 CG1 B:VAL160 4.7 17.6 1.0 CG1 A:VAL160 4.7 16.2 1.0 CG2 B:VAL160 4.7 17.6 1.0 CG2 C:VAL160 4.7 19.4 1.0 HG11 D:VAL160 5.0 17.5 1.0 HG11 C:VAL160 5.0 19.4 1.0 HG11 A:VAL160 5.0 16.2 1.0 HG11 B:VAL160 5.0 17.6 1.0

R.Nunez-Ramirez, J.Huesa, Y.Bel, J.Ferre, P.Casino, E.Arias-Palomo. Molecular Architecture and Activation of the Insecticidal Protein VIP3AA From Bacillus Thuringiensis. Nat Commun V. 11 3974 2020.
ISSN: ESSN 2041-1723
PubMed: 32769995
DOI: 10.1038/S41467-020-17758-5