Magnesium in PDB 6tt7: Ovine Atp Synthase 1A State

All present enzymatic activity of Ovine Atp Synthase 1A State:
7.1.2.2;

The binding sites of Magnesium atom in the Ovine Atp Synthase 1A State (pdb code 6tt7). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 3 binding sites of Magnesium where determined in the Ovine Atp Synthase 1A State, PDB code: 6tt7:
Jump to Magnesium binding site number: 1; 2; 3;

Magnesium binding site 1 out of 3 in the Ovine Atp Synthase 1A State


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Ovine Atp Synthase 1A State within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg601 b:97.1 occ:1.00 OG1 B:THR176 2.1 63.9 1.0 O3B B:ADP602 2.1 99.4 1.0 O3A B:ADP602 2.5 82.4 1.0 PB B:ADP602 2.7 78.3 1.0 O2B B:ADP602 3.1 85.7 1.0 OD1 B:ASP269 3.4 97.3 1.0 CB B:THR176 3.4 59.0 1.0 OD2 B:ASP269 3.5 0.4 1.0 NE2 B:GLN208 3.7 58.7 1.0 CG B:ASP269 3.9 0.2 1.0 PA B:ADP602 3.9 76.5 1.0 O1B B:ADP602 4.1 78.5 1.0 CG2 B:THR176 4.2 65.5 1.0 N B:THR176 4.3 51.3 1.0 O2A B:ADP602 4.4 91.2 1.0 CA B:THR176 4.4 50.5 1.0 O5' B:ADP602 4.5 77.2 1.0 CD B:GLN208 4.6 53.9 1.0 OD2 B:ASP270 4.7 0.3 1.0 OE1 B:GLN208 4.8 55.0 1.0 O1A B:ADP602 5.0 91.1 1.0

Magnesium binding site 2 out of 3 in the Ovine Atp Synthase 1A State


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Ovine Atp Synthase 1A State within 5.0Å range: probe atom residue distance (Å) B Occ C:Mg601 b:40.3 occ:1.00 OG1 C:THR176 2.1 47.9 1.0 O2B C:ADP602 2.1 45.7 1.0 OD1 C:ASP269 3.2 92.2 1.0 OD2 C:ASP269 3.4 0.7 1.0 PB C:ADP602 3.4 50.1 1.0 CB C:THR176 3.4 38.8 1.0 NE2 C:GLN208 3.7 79.8 1.0 CG C:ASP269 3.7 99.1 1.0 O1B C:ADP602 3.9 51.0 1.0 CG2 C:THR176 4.1 49.7 1.0 O3B C:ADP602 4.1 48.0 1.0 CA C:THR176 4.4 32.8 1.0 N C:THR176 4.4 31.0 1.0 O3A C:ADP602 4.5 43.5 1.0 O2A C:ADP602 4.7 70.0 1.0 CG C:LYS175 4.7 52.7 1.0 CD C:GLN208 4.9 72.6 1.0 PA C:ADP602 4.9 52.9 1.0 CD C:LYS175 5.0 52.7 1.0 CG1 C:VAL326 5.0 79.0 1.0 O1A C:ADP602 5.0 54.4 1.0

Magnesium binding site 3 out of 3 in the Ovine Atp Synthase 1A State


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of Ovine Atp Synthase 1A State within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg601 b:77.4 occ:1.00 O2A A:ADP602 2.1 63.5 1.0 O3A A:ADP602 2.1 86.7 1.0 O2B A:ADP602 2.5 0.4 1.0 PA A:ADP602 2.6 68.8 1.0 PB A:ADP602 2.6 99.0 1.0 O3B A:ADP602 2.8 85.7 1.0 O5' A:ADP602 3.5 82.6 1.0 OG1 A:THR176 3.7 20.1 1.0 O1A A:ADP602 3.9 43.8 1.0 O1B A:ADP602 4.0 84.4 1.0 NZ A:LYS175 4.5 99.0 1.0 CB A:THR176 4.6 20.7 1.0 OE2 A:GLU328 4.6 0.2 1.0 OD2 A:ASP269 4.6 99.2 1.0 C5' A:ADP602 4.8 64.7 1.0 OD2 A:ASP270 4.9 0.5 1.0 OD1 A:ASP269 4.9 0.8 1.0

G.Pinke, L.Zhou, L.A.Sazanov. Cryo-Em Structure of the Entire Mammalian F-Type Atp Synthase. Nat.Struct.Mol.Biol. 2020.
ISSN: ESSN 1545-9985
PubMed: 32929284
DOI: 10.1038/S41594-020-0503-8