Magnesium in PDB 6tu4: Structure of Plasmodium ACTIN1 Filament

The structure of Structure of Plasmodium ACTIN1 Filament also contains other interesting chemical elements:

Bromine

(Br)

5 atoms

The binding sites of Magnesium atom in the Structure of Plasmodium ACTIN1 Filament (pdb code 6tu4). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 5 binding sites of Magnesium where determined in the Structure of Plasmodium ACTIN1 Filament, PDB code: 6tu4:
Jump to Magnesium binding site number: 1; 2; 3; 4; 5;

Magnesium binding site 1 out of 5 in the Structure of Plasmodium ACTIN1 Filament


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of Plasmodium ACTIN1 Filament within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg401 b:28.0 occ:1.00 O A:HOH513 2.0 28.2 1.0 O A:HOH520 2.0 27.0 1.0 O A:HOH514 2.0 27.7 1.0 O A:HOH525 2.1 26.9 1.0 O A:HOH512 2.1 27.5 1.0 O3B A:ADP403 2.2 30.5 1.0 PB A:ADP403 3.4 30.5 1.0 O2B A:ADP403 3.7 30.5 1.0 O2A A:ADP403 3.8 30.5 1.0 OD2 A:ASP155 4.3 28.4 1.0 OE1 A:GLN138 4.3 31.3 1.0 O3A A:ADP403 4.4 30.5 1.0 O1B A:ADP403 4.5 30.5 1.0 O A:HOH510 4.5 26.3 1.0 OD2 A:ASP12 4.6 29.1 1.0 CD A:GLN138 4.6 31.3 1.0 NZ A:LYS19 4.6 29.6 1.0 PA A:ADP403 4.7 30.5 1.0 NE2 A:GLN138 4.7 31.3 1.0 OD1 A:ASP12 4.8 29.1 1.0 CA A:GLY14 4.8 28.8 1.0 CA A:GLY157 4.8 28.1 1.0

Magnesium binding site 2 out of 5 in the Structure of Plasmodium ACTIN1 Filament


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Structure of Plasmodium ACTIN1 Filament within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg401 b:27.2 occ:1.00 O B:HOH514 2.0 28.7 1.0 O B:HOH504 2.0 28.4 1.0 O B:HOH517 2.1 27.4 1.0 O B:HOH512 2.1 29.3 1.0 O B:HOH508 2.1 30.6 1.0 O3B B:ADP403 2.2 26.9 1.0 PB B:ADP403 3.4 26.9 1.0 O2A B:ADP403 3.6 26.9 1.0 O2B B:ADP403 3.7 26.9 1.0 OE1 B:GLN138 4.3 32.6 1.0 OD2 B:ASP155 4.3 30.0 1.0 O3A B:ADP403 4.5 26.9 1.0 OD2 B:ASP12 4.5 31.8 1.0 O1B B:ADP403 4.5 26.9 1.0 NZ B:LYS19 4.6 31.3 1.0 O B:HOH505 4.6 29.1 1.0 PA B:ADP403 4.6 26.9 1.0 CD B:GLN138 4.6 32.6 1.0 OD1 B:ASP12 4.6 31.8 1.0 CA B:GLY14 4.7 30.2 1.0 CA B:GLY157 4.8 28.8 1.0 NE2 B:GLN138 4.8 32.6 1.0 O B:HOH526 5.0 30.7 1.0

Magnesium binding site 3 out of 5 in the Structure of Plasmodium ACTIN1 Filament


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of Structure of Plasmodium ACTIN1 Filament within 5.0Å range: probe atom residue distance (Å) B Occ C:Mg401 b:26.7 occ:1.00 O C:HOH515 2.0 27.9 1.0 O C:HOH518 2.0 27.3 1.0 O C:HOH514 2.1 27.9 1.0 O C:HOH510 2.1 28.5 1.0 O C:HOH504 2.1 30.2 1.0 O3B C:ADP403 2.1 27.9 1.0 PB C:ADP403 3.4 27.9 1.0 O2B C:ADP403 3.7 27.9 1.0 O3A C:ADP403 4.1 27.9 1.0 OE1 C:GLN138 4.2 32.7 1.0 O2A C:ADP403 4.2 27.9 1.0 OD2 C:ASP155 4.3 29.7 1.0 OD2 C:ASP12 4.4 32.9 1.0 CD C:GLN138 4.5 32.7 1.0 OD1 C:ASP12 4.5 32.9 1.0 NE2 C:GLN138 4.5 32.7 1.0 NZ C:LYS19 4.6 32.2 1.0 O C:HOH507 4.6 29.4 1.0 O1B C:ADP403 4.6 27.9 1.0 CA C:GLY14 4.7 30.9 1.0 PA C:ADP403 4.7 27.9 1.0 CA C:GLY157 4.9 27.6 1.0 CG C:ASP12 4.9 32.9 1.0

Magnesium binding site 4 out of 5 in the Structure of Plasmodium ACTIN1 Filament


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 4 of Structure of Plasmodium ACTIN1 Filament within 5.0Å range: probe atom residue distance (Å) B Occ D:Mg401 b:24.4 occ:1.00 O D:HOH515 2.0 24.7 1.0 O D:HOH522 2.0 25.2 1.0 O D:HOH507 2.1 24.2 1.0 O D:HOH521 2.1 26.1 1.0 O D:HOH511 2.1 26.4 1.0 O3B D:ADP403 2.2 25.0 1.0 PB D:ADP403 3.4 25.0 1.0 O2B D:ADP403 3.7 25.0 1.0 O2A D:ADP403 3.8 25.0 1.0 OD2 D:ASP155 4.3 26.4 1.0 OE1 D:GLN138 4.4 30.6 1.0 O3A D:ADP403 4.5 25.0 1.0 O1B D:ADP403 4.5 25.0 1.0 O D:HOH510 4.5 24.8 1.0 NZ D:LYS19 4.5 28.1 1.0 OD2 D:ASP12 4.6 29.6 1.0 PA D:ADP403 4.6 25.0 1.0 CD D:GLN138 4.7 30.6 1.0 OD1 D:ASP12 4.7 29.6 1.0 CA D:GLY14 4.7 26.7 1.0 NE2 D:GLN138 4.8 30.6 1.0 CA D:GLY157 4.8 23.7 1.0 O D:HOH528 5.0 28.4 1.0

Magnesium binding site 5 out of 5 in the Structure of Plasmodium ACTIN1 Filament


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 5 of Structure of Plasmodium ACTIN1 Filament within 5.0Å range: probe atom residue distance (Å) B Occ F:Mg401 b:24.6 occ:1.00 O F:HOH512 2.0 24.1 1.0 O F:HOH510 2.1 24.4 1.0 O F:HOH517 2.1 25.2 1.0 O F:HOH519 2.1 25.5 1.0 O F:HOH511 2.1 25.4 1.0 O3B F:ADP403 2.2 26.6 1.0 PB F:ADP403 3.4 26.6 1.0 O2B F:ADP403 3.7 26.6 1.0 O2A F:ADP403 3.8 26.6 1.0 OE1 F:GLN138 4.4 29.3 1.0 O3A F:ADP403 4.4 26.6 1.0 O F:HOH508 4.5 25.2 1.0 O1B F:ADP403 4.5 26.6 1.0 NZ F:LYS19 4.5 26.7 1.0 OD2 F:ASP12 4.5 27.8 1.0 OD1 F:ASP155 4.6 26.0 1.0 PA F:ADP403 4.7 26.6 1.0 CD F:GLN138 4.7 29.3 1.0 CA F:GLY157 4.7 24.3 1.0 OD1 F:ASP12 4.7 27.8 1.0 CA F:GLY14 4.8 26.6 1.0 NE2 F:GLN138 4.9 29.3 1.0

J.Vahokoski, L.J.Calder, A.J.Lopez, J.E.Molloy, P.B.Rosenthal, I.Kursula. Malaria Parasite Actomyosin Rigor-State Structure at Near-Atomic Resolution To Be Published.