Magnesium in PDB 6u7b: Structure of E. Coli MS115-1 Cdnc:Horma-Deltan Complex

The structure of Structure of E. Coli MS115-1 Cdnc:Horma-Deltan Complex, PDB code: 6u7b was solved by Q.Ye, K.D.Corbett, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	103.84 / 2.09
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	52.286, 142.897, 151.157, 90.00, 90.00, 90.00
R / Rfree (%)	20.5 / 23.3

The structure of Structure of E. Coli MS115-1 Cdnc:Horma-Deltan Complex also contains other interesting chemical elements:

Chlorine

(Cl)

2 atoms

The binding sites of Magnesium atom in the Structure of E. Coli MS115-1 Cdnc:Horma-Deltan Complex (pdb code 6u7b). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Structure of E. Coli MS115-1 Cdnc:Horma-Deltan Complex, PDB code: 6u7b:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Structure of E. Coli MS115-1 Cdnc:Horma-Deltan Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of E. Coli MS115-1 Cdnc:Horma-Deltan Complex within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg401 b:75.8 occ:1.00 O A:HOH503 2.1 47.9 1.0 OD1 A:ASP72 2.3 63.5 1.0 OD1 A:ASP74 2.5 60.1 1.0 CG A:ASP72 3.1 66.7 1.0 OD2 A:ASP72 3.1 66.6 1.0 CG A:ASP74 3.3 57.7 1.0 OD2 A:ASP74 3.4 57.9 1.0 OD2 A:ASP130 3.9 67.9 1.0 HB3 A:ASP130 4.2 77.2 1.0 HB2 A:ASP130 4.3 77.2 1.0 OD1 A:ASN71 4.5 81.6 1.0 CB A:ASP72 4.5 72.6 1.0 CB A:ASP130 4.6 64.3 1.0 O A:ASP72 4.6 82.1 1.0 CG A:ASP130 4.7 66.5 1.0 CB A:ASP74 4.7 55.2 1.0 HD12 A:LEU70 4.8 74.8 1.0 HD11 A:LEU70 4.8 74.8 1.0 HB2 A:ASP72 4.8 87.1 1.0 H A:ASP72 4.9 0.3 1.0 HA A:ASP74 4.9 67.2 1.0 C A:ASP72 4.9 80.6 1.0

Magnesium binding site 2 out of 2 in the Structure of E. Coli MS115-1 Cdnc:Horma-Deltan Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Structure of E. Coli MS115-1 Cdnc:Horma-Deltan Complex within 5.0Å range: probe atom residue distance (Å) B Occ C:Mg401 b:60.0 occ:1.00 O C:HOH518 1.9 34.5 1.0 O C:HOH506 1.9 39.3 1.0 O C:HOH540 2.1 38.2 1.0 O C:HOH600 2.1 42.2 1.0 OD1 C:ASP74 2.1 57.7 1.0 OD1 C:ASP72 2.2 46.9 1.0 CG C:ASP74 3.0 58.9 1.0 CG C:ASP72 3.2 46.4 1.0 OD2 C:ASP74 3.2 62.7 1.0 OD2 C:ASP72 3.5 47.9 1.0 HB3 C:ASP130 3.9 51.5 1.0 O C:ASP72 4.1 42.0 1.0 OD2 C:ASP130 4.2 49.1 1.0 OD1 C:ASN71 4.4 60.6 1.0 CB C:ASP74 4.4 50.0 1.0 HB2 C:ASP130 4.5 51.5 1.0 H C:ASP72 4.5 57.0 1.0 C C:ASP72 4.5 45.0 1.0 HA C:ASP74 4.5 48.7 1.0 CB C:ASP130 4.5 42.9 1.0 CB C:ASP72 4.5 47.3 1.0 N C:ASP74 4.7 36.9 1.0 H C:ASP74 4.7 44.3 1.0 CA C:ASP74 4.8 40.6 1.0 CG C:ASP130 4.8 47.8 1.0 HB2 C:ASP74 4.8 60.0 1.0 HD11 C:LEU70 4.9 41.4 1.0 HB2 C:ASP72 4.9 56.8 1.0 CA C:ASP72 4.9 46.4 1.0 N C:ASP72 4.9 47.5 1.0 O C:HOH538 5.0 47.8 1.0 HB3 C:ASP74 5.0 60.0 1.0

Q.Ye, R.K.Lau, I.T.Mathews, E.A.Birkholz, J.D.Watrous, C.S.Azimi, J.Pogliano, M.Jain, K.D.Corbett. Horma Domain Proteins and A TRIP13-Like Atpase Regulate Bacterial Cgas-Like Enzymes to Mediate Bacteriophage Immunity To Be Published.