Magnesium in PDB 6u9h: Arabidopsis Thaliana Acetohydroxyacid Synthase Complex

Enzymatic activity of Arabidopsis Thaliana Acetohydroxyacid Synthase Complex

All present enzymatic activity of Arabidopsis Thaliana Acetohydroxyacid Synthase Complex:
2.2.1.6;

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Arabidopsis Thaliana Acetohydroxyacid Synthase Complex (pdb code 6u9h). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 8 binding sites of Magnesium where determined in the Arabidopsis Thaliana Acetohydroxyacid Synthase Complex, PDB code: 6u9h:
Jump to Magnesium binding site number: 1; 2; 3; 4; 5; 6; 7; 8;

Magnesium binding site 1 out of 8 in 6u9h

Go back to Magnesium Binding Sites List in 6u9h
Magnesium binding site 1 out of 8 in the Arabidopsis Thaliana Acetohydroxyacid Synthase Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Arabidopsis Thaliana Acetohydroxyacid Synthase Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg701

b:89.3
occ:1.00
 OD1 A:ASP538 2.0 0.9 1.0
O2A A:TPP703 2.1 0.7 1.0
N A:ASP538 2.1 0.9 1.0
O3A A:TPP703 2.2 0.7 1.0
O1B A:TPP703 2.3 0.7 1.0
PB A:TPP703 2.3 0.7 1.0
CA A:GLY537 2.5 98.5 1.0
PA A:TPP703 2.5 0.7 1.0
O2B A:TPP703 2.5 0.7 1.0
C A:GLY537 2.6 98.5 1.0
CG A:ASP538 3.2 0.9 1.0
CA A:ASP538 3.3 0.9 1.0
N A:GLY539 3.6 93.5 1.0
O7 A:TPP703 3.6 0.7 1.0
O1A A:TPP703 3.7 0.7 1.0
CB A:ASP538 3.7 0.9 1.0
O A:GLY537 3.7 98.5 1.0
N A:GLY537 3.8 98.5 1.0
O3B A:TPP703 3.8 0.7 1.0
C A:ASP538 4.0 0.9 1.0
O A:LEU563 4.2 0.7 1.0
OD1 A:ASN565 4.2 0.1 1.0
OD2 A:ASP538 4.2 0.9 1.0
ND1 A:HIS488 4.3 0.1 1.0
O A:HIS567 4.3 0.1 1.0
C7 A:TPP703 4.6 0.7 1.0
CG A:HIS488 4.8 0.1 1.0
CA A:GLY539 4.8 93.5 1.0
N A:SER540 4.8 92.6 1.0
C A:ASP536 4.9 0.6 1.0
CB A:HIS488 4.9 0.1 1.0
CE1 A:HIS488 4.9 0.1 1.0
C A:LEU563 4.9 0.7 1.0

Magnesium binding site 2 out of 8 in 6u9h

Go back to Magnesium Binding Sites List in 6u9h
Magnesium binding site 2 out of 8 in the Arabidopsis Thaliana Acetohydroxyacid Synthase Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Arabidopsis Thaliana Acetohydroxyacid Synthase Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg701

b:0.1
occ:1.00
 O1A B:TPP703 2.1 0.6 1.0
O3A B:TPP703 2.1 0.6 1.0
O1B B:TPP703 2.1 0.6 1.0
PB B:TPP703 2.4 0.6 1.0
CB B:ASP538 2.5 0.5 1.0
PA B:TPP703 2.6 0.6 1.0
O B:HIS567 2.7 0.2 1.0
O3B B:TPP703 2.9 0.6 1.0
N B:ASP538 3.2 0.5 1.0
OD1 B:ASN565 3.3 0.3 1.0
CA B:ASP538 3.4 0.5 1.0
CA B:LEU568 3.4 0.4 1.0
N B:GLY569 3.4 0.9 1.0
CG B:ASP538 3.5 0.5 1.0
OD2 B:ASP538 3.5 0.5 1.0
O7 B:TPP703 3.6 0.6 1.0
C B:HIS567 3.6 0.2 1.0
N B:GLY539 3.8 96.4 1.0
O2A B:TPP703 3.8 0.6 1.0
O2B B:TPP703 3.9 0.6 1.0
N B:LEU568 3.9 0.4 1.0
C B:LEU568 3.9 0.4 1.0
C B:ASP538 4.1 0.5 1.0
C7 B:TPP703 4.2 0.6 1.0
C B:GLY537 4.4 99.8 1.0
CG B:ASN565 4.4 0.3 1.0
CB B:LEU568 4.4 0.4 1.0
CA B:GLY569 4.6 0.9 1.0
OD1 B:ASP538 4.6 0.5 1.0
CG B:LEU568 4.7 0.4 1.0
ND2 B:ASN565 4.7 0.3 1.0
CA B:GLY537 4.8 99.8 1.0
N B:HIS567 4.8 0.2 1.0
CA B:HIS567 4.8 0.2 1.0
OE1 B:GLN487 4.9 0.1 1.0
O B:LEU563 5.0 0.7 1.0

Magnesium binding site 3 out of 8 in 6u9h

Go back to Magnesium Binding Sites List in 6u9h
Magnesium binding site 3 out of 8 in the Arabidopsis Thaliana Acetohydroxyacid Synthase Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of Arabidopsis Thaliana Acetohydroxyacid Synthase Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
H:Mg701

b:85.4
occ:1.00
 OD1 H:ASP538 2.1 0.1 1.0
O2A H:TPP703 2.1 0.9 1.0
N H:ASP538 2.1 0.1 1.0
O3A H:TPP703 2.1 0.9 1.0
PB H:TPP703 2.4 0.9 1.0
O2B H:TPP703 2.4 0.9 1.0
PA H:TPP703 2.5 0.9 1.0
O1B H:TPP703 2.5 0.9 1.0
CA H:GLY537 2.6 97.8 1.0
C H:GLY537 2.6 97.8 1.0
CG H:ASP538 3.1 0.1 1.0
CA H:ASP538 3.3 0.1 1.0
O7 H:TPP703 3.5 0.9 1.0
N H:GLY539 3.5 92.8 1.0
CB H:ASP538 3.7 0.1 1.0
O H:GLY537 3.8 97.8 1.0
O1A H:TPP703 3.8 0.9 1.0
O3B H:TPP703 3.9 0.9 1.0
C H:ASP538 3.9 0.1 1.0
N H:GLY537 3.9 97.8 1.0
OD2 H:ASP538 4.1 0.1 1.0
OD1 H:ASN565 4.2 0.8 1.0
O H:HIS567 4.2 0.0 1.0
O H:LEU563 4.3 1.0 1.0
ND1 H:HIS488 4.4 0.6 1.0
C7 H:TPP703 4.5 0.9 1.0
CA H:GLY539 4.7 92.8 1.0
N H:SER540 4.7 91.6 1.0
CG H:HIS488 4.9 0.6 1.0
C H:ASP536 5.0 0.3 1.0

Magnesium binding site 4 out of 8 in 6u9h

Go back to Magnesium Binding Sites List in 6u9h
Magnesium binding site 4 out of 8 in the Arabidopsis Thaliana Acetohydroxyacid Synthase Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 4 of Arabidopsis Thaliana Acetohydroxyacid Synthase Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
I:Mg701

b:0.7
occ:1.00
 O1A I:TPP703 2.1 1.0 1.0
O3A I:TPP703 2.1 1.0 1.0
O1B I:TPP703 2.2 1.0 1.0
PB I:TPP703 2.4 1.0 1.0
CB I:ASP538 2.5 0.9 1.0
PA I:TPP703 2.6 1.0 1.0
O I:HIS567 2.7 0.2 1.0
O3B I:TPP703 2.9 1.0 1.0
N I:ASP538 3.1 0.9 1.0
CA I:ASP538 3.3 0.9 1.0
CA I:LEU568 3.4 1.0 1.0
OD1 I:ASN565 3.4 0.0 1.0
CG I:ASP538 3.5 0.9 1.0
N I:GLY569 3.5 0.9 1.0
OD2 I:ASP538 3.5 0.9 1.0
C I:HIS567 3.6 0.2 1.0
O7 I:TPP703 3.6 1.0 1.0
O2A I:TPP703 3.8 1.0 1.0
N I:GLY539 3.8 97.7 1.0
O2B I:TPP703 3.9 1.0 1.0
N I:LEU568 3.9 1.0 1.0
C I:LEU568 4.0 1.0 1.0
C I:ASP538 4.1 0.9 1.0
C7 I:TPP703 4.2 1.0 1.0
C I:GLY537 4.3 1.0 1.0
CB I:LEU568 4.5 1.0 1.0
CG I:ASN565 4.5 0.0 1.0
OD1 I:ASP538 4.6 0.9 1.0
CA I:GLY569 4.6 0.9 1.0
CA I:GLY537 4.7 1.0 1.0
CG I:LEU568 4.7 1.0 1.0
N I:HIS567 4.8 0.2 1.0
CA I:HIS567 4.9 0.2 1.0
OE1 I:GLN487 4.9 0.2 1.0
ND2 I:ASN565 4.9 0.0 1.0
O I:LEU563 4.9 0.4 1.0
C6 I:TPP703 5.0 1.0 1.0

Magnesium binding site 5 out of 8 in 6u9h

Go back to Magnesium Binding Sites List in 6u9h
Magnesium binding site 5 out of 8 in the Arabidopsis Thaliana Acetohydroxyacid Synthase Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 5 of Arabidopsis Thaliana Acetohydroxyacid Synthase Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
L:Mg701

b:88.7
occ:1.00
 OD1 L:ASP538 2.0 0.6 1.0
O3A L:TPP703 2.1 0.3 1.0
O2A L:TPP703 2.1 0.3 1.0
N L:ASP538 2.1 0.6 1.0
PB L:TPP703 2.4 0.3 1.0
O2B L:TPP703 2.5 0.3 1.0
CA L:GLY537 2.5 98.5 1.0
PA L:TPP703 2.5 0.3 1.0
O1B L:TPP703 2.6 0.3 1.0
C L:GLY537 2.6 98.5 1.0
CG L:ASP538 3.2 0.6 1.0
CA L:ASP538 3.3 0.6 1.0
O7 L:TPP703 3.5 0.3 1.0
N L:GLY539 3.6 95.6 1.0
CB L:ASP538 3.7 0.6 1.0
O1A L:TPP703 3.8 0.3 1.0
O L:GLY537 3.8 98.5 1.0
N L:GLY537 3.9 98.5 1.0
O3B L:TPP703 3.9 0.3 1.0
C L:ASP538 4.0 0.6 1.0
OD2 L:ASP538 4.2 0.6 1.0
O L:LEU563 4.2 0.3 1.0
ND1 L:HIS488 4.2 0.1 1.0
OD1 L:ASN565 4.2 0.4 1.0
O L:HIS567 4.3 0.9 1.0
C7 L:TPP703 4.6 0.3 1.0
CE1 L:HIS488 4.8 0.1 1.0
CG L:HIS488 4.8 0.1 1.0
CA L:GLY539 4.8 95.6 1.0
N L:SER540 4.9 94.1 1.0
C L:ASP536 4.9 0.8 1.0
C L:LEU563 4.9 0.3 1.0
OG L:SER540 5.0 94.1 1.0

Magnesium binding site 6 out of 8 in 6u9h

Go back to Magnesium Binding Sites List in 6u9h
Magnesium binding site 6 out of 8 in the Arabidopsis Thaliana Acetohydroxyacid Synthase Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 6 of Arabidopsis Thaliana Acetohydroxyacid Synthase Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
M:Mg701

b:0.1
occ:1.00
 O1A M:TPP703 2.1 0.9 1.0
O3A M:TPP703 2.1 0.9 1.0
O1B M:TPP703 2.2 0.9 1.0
PB M:TPP703 2.4 0.9 1.0
CB M:ASP538 2.5 1.0 1.0
PA M:TPP703 2.6 0.9 1.0
O M:HIS567 2.7 0.2 1.0
O3B M:TPP703 2.9 0.9 1.0
N M:ASP538 3.2 1.0 1.0
CA M:LEU568 3.3 0.5 1.0
CA M:ASP538 3.4 1.0 1.0
N M:GLY569 3.4 0.3 1.0
OD1 M:ASN565 3.4 0.7 1.0
CG M:ASP538 3.4 1.0 1.0
OD2 M:ASP538 3.5 1.0 1.0
C M:HIS567 3.5 0.2 1.0
O7 M:TPP703 3.6 0.9 1.0
O2A M:TPP703 3.8 0.9 1.0
N M:LEU568 3.8 0.5 1.0
N M:GLY539 3.9 98.4 1.0
O2B M:TPP703 3.9 0.9 1.0
C M:LEU568 3.9 0.5 1.0
C M:ASP538 4.1 1.0 1.0
C7 M:TPP703 4.2 0.9 1.0
C M:GLY537 4.4 0.8 1.0
CG M:ASN565 4.4 0.7 1.0
CB M:LEU568 4.4 0.5 1.0
CA M:GLY569 4.5 0.3 1.0
OD1 M:ASP538 4.5 1.0 1.0
CG M:LEU568 4.7 0.5 1.0
ND2 M:ASN565 4.8 0.7 1.0
CA M:HIS567 4.8 0.2 1.0
N M:HIS567 4.8 0.2 1.0
CA M:GLY537 4.8 0.8 1.0
OE1 M:GLN487 4.9 0.8 1.0
C6 M:TPP703 5.0 0.9 1.0

Magnesium binding site 7 out of 8 in 6u9h

Go back to Magnesium Binding Sites List in 6u9h
Magnesium binding site 7 out of 8 in the Arabidopsis Thaliana Acetohydroxyacid Synthase Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 7 of Arabidopsis Thaliana Acetohydroxyacid Synthase Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
P:Mg701

b:86.3
occ:1.00
 OD1 P:ASP538 2.0 0.8 1.0
O2A P:TPP703 2.0 0.2 1.0
N P:ASP538 2.1 0.8 1.0
O3A P:TPP703 2.1 0.2 1.0
O1B P:TPP703 2.1 0.2 1.0
PB P:TPP703 2.3 0.2 1.0
CA P:GLY537 2.5 96.2 1.0
PA P:TPP703 2.5 0.2 1.0
C P:GLY537 2.6 96.2 1.0
O2B P:TPP703 2.7 0.2 1.0
CG P:ASP538 3.1 0.8 1.0
CA P:ASP538 3.3 0.8 1.0
O7 P:TPP703 3.6 0.2 1.0
N P:GLY539 3.6 93.0 1.0
CB P:ASP538 3.7 0.8 1.0
O1A P:TPP703 3.7 0.2 1.0
O P:GLY537 3.8 96.2 1.0
O3B P:TPP703 3.8 0.2 1.0
N P:GLY537 3.9 96.2 1.0
C P:ASP538 3.9 0.8 1.0
O P:LEU563 4.2 0.8 1.0
OD2 P:ASP538 4.2 0.8 1.0
OD1 P:ASN565 4.2 0.1 1.0
ND1 P:HIS488 4.2 0.2 1.0
O P:HIS567 4.3 0.2 1.0
C7 P:TPP703 4.6 0.2 1.0
CG P:HIS488 4.7 0.2 1.0
CA P:GLY539 4.8 93.0 1.0
N P:SER540 4.8 90.9 1.0
CB P:HIS488 4.8 0.2 1.0
C P:ASP536 4.9 0.3 1.0
CE1 P:HIS488 4.9 0.2 1.0
C P:LEU563 5.0 0.8 1.0
O P:ASP536 5.0 0.3 1.0

Magnesium binding site 8 out of 8 in 6u9h

Go back to Magnesium Binding Sites List in 6u9h
Magnesium binding site 8 out of 8 in the Arabidopsis Thaliana Acetohydroxyacid Synthase Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 8 of Arabidopsis Thaliana Acetohydroxyacid Synthase Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
Q:Mg701

b:0.2
occ:1.00
 O1A Q:TPP703 2.1 0.9 1.0
O3A Q:TPP703 2.1 0.9 1.0
O1B Q:TPP703 2.2 0.9 1.0
PB Q:TPP703 2.4 0.9 1.0
CB Q:ASP538 2.5 0.3 1.0
PA Q:TPP703 2.6 0.9 1.0
O Q:HIS567 2.7 0.3 1.0
O3B Q:TPP703 2.9 0.9 1.0
N Q:ASP538 3.1 0.3 1.0
CA Q:ASP538 3.3 0.3 1.0
OD1 Q:ASN565 3.4 0.5 1.0
CA Q:LEU568 3.4 0.4 1.0
CG Q:ASP538 3.5 0.3 1.0
N Q:GLY569 3.5 0.1 1.0
OD2 Q:ASP538 3.6 0.3 1.0
C Q:HIS567 3.6 0.3 1.0
O7 Q:TPP703 3.6 0.9 1.0
O2A Q:TPP703 3.7 0.9 1.0
N Q:GLY539 3.8 97.7 1.0
O2B Q:TPP703 3.9 0.9 1.0
N Q:LEU568 3.9 0.4 1.0
C Q:LEU568 4.0 0.4 1.0
C Q:ASP538 4.1 0.3 1.0
C7 Q:TPP703 4.2 0.9 1.0
C Q:GLY537 4.3 0.5 1.0
CG Q:ASN565 4.5 0.5 1.0
CB Q:LEU568 4.5 0.4 1.0
OD1 Q:ASP538 4.6 0.3 1.0
CA Q:GLY569 4.6 0.1 1.0
CA Q:GLY537 4.7 0.5 1.0
CG Q:LEU568 4.8 0.4 1.0
ND2 Q:ASN565 4.8 0.5 1.0
N Q:HIS567 4.9 0.3 1.0
CA Q:HIS567 4.9 0.3 1.0
OE1 Q:GLN487 4.9 0.2 1.0
O Q:LEU563 4.9 0.1 1.0
C6 Q:TPP703 5.0 0.9 1.0

Reference:

L.W.Guddat, Y.S.Low, Z.Rao. Fungal and Plant Acetohydroxyacid Synthases Form Complex Multi-Subunit Assemblies in the Shape of A Maltese Cross. To Be Published.
Page generated: Mon Jan 25 15:16:18 2021

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy