Atomistry » Magnesium » PDB 6u1j-6uey » 6uby
Atomistry »
  Magnesium »
    PDB 6u1j-6uey »
      6uby »

Magnesium in PDB 6uby: Isolated Cofilin Bound to An Actin Filament

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Isolated Cofilin Bound to An Actin Filament (pdb code 6uby). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 7 binding sites of Magnesium where determined in the Isolated Cofilin Bound to An Actin Filament, PDB code: 6uby:
Jump to Magnesium binding site number: 1; 2; 3; 4; 5; 6; 7;

Magnesium binding site 1 out of 7 in 6uby

Go back to Magnesium Binding Sites List in 6uby
Magnesium binding site 1 out of 7 in the Isolated Cofilin Bound to An Actin Filament


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Isolated Cofilin Bound to An Actin Filament within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg801

b:41.7
occ:1.00
O3B A:ADP802 2.1 38.0 1.0
O2B A:ADP802 2.3 38.0 1.0
PB A:ADP802 2.6 38.0 1.0
OE1 A:GLN137 3.0 42.2 1.0
O3A A:ADP802 3.4 38.0 1.0
CD A:GLN137 3.7 42.2 1.0
O1B A:ADP802 4.0 38.0 1.0
OD1 A:ASP154 4.0 36.6 1.0
NE2 A:GLN137 4.1 42.2 1.0
CA A:GLY156 4.1 33.7 1.0
N A:GLY156 4.6 33.7 1.0
OD2 A:ASP154 4.6 36.6 1.0
O2A A:ADP802 4.6 38.0 1.0
PA A:ADP802 4.7 38.0 1.0
OD2 A:ASP11 4.7 48.3 1.0
CG A:ASP154 4.8 36.6 1.0
CG A:GLN137 4.8 42.2 1.0
CG2 A:VAL339 4.8 43.2 1.0
CB A:GLN137 4.9 42.2 1.0
OD1 A:ASP11 5.0 48.3 1.0
CA A:GLY13 5.0 42.8 1.0
NZ A:LYS18 5.0 43.9 1.0

Magnesium binding site 2 out of 7 in 6uby

Go back to Magnesium Binding Sites List in 6uby
Magnesium binding site 2 out of 7 in the Isolated Cofilin Bound to An Actin Filament


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Isolated Cofilin Bound to An Actin Filament within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg801

b:41.7
occ:1.00
O3B B:ADP802 2.1 38.0 1.0
O2B B:ADP802 2.3 38.0 1.0
PB B:ADP802 2.6 38.0 1.0
OE1 B:GLN137 3.0 42.2 1.0
O3A B:ADP802 3.4 38.0 1.0
CD B:GLN137 3.7 42.2 1.0
O1B B:ADP802 4.0 38.0 1.0
OD1 B:ASP154 4.0 36.6 1.0
NE2 B:GLN137 4.1 42.2 1.0
CA B:GLY156 4.1 33.7 1.0
N B:GLY156 4.6 33.7 1.0
OD2 B:ASP154 4.6 36.6 1.0
O2A B:ADP802 4.6 38.0 1.0
PA B:ADP802 4.7 38.0 1.0
OD2 B:ASP11 4.7 48.3 1.0
CG B:ASP154 4.8 36.6 1.0
CG B:GLN137 4.8 42.2 1.0
CG2 B:VAL339 4.8 43.2 1.0
CB B:GLN137 4.9 42.2 1.0
OD1 B:ASP11 5.0 48.3 1.0
CA B:GLY13 5.0 42.8 1.0
NZ B:LYS18 5.0 43.9 1.0

Magnesium binding site 3 out of 7 in 6uby

Go back to Magnesium Binding Sites List in 6uby
Magnesium binding site 3 out of 7 in the Isolated Cofilin Bound to An Actin Filament


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of Isolated Cofilin Bound to An Actin Filament within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Mg801

b:41.7
occ:1.00
O3B C:ADP802 2.1 38.0 1.0
O2B C:ADP802 2.3 38.0 1.0
PB C:ADP802 2.6 38.0 1.0
OE1 C:GLN137 3.0 42.2 1.0
O3A C:ADP802 3.4 38.0 1.0
CD C:GLN137 3.7 42.2 1.0
O1B C:ADP802 4.0 38.0 1.0
OD1 C:ASP154 4.0 36.6 1.0
NE2 C:GLN137 4.1 42.2 1.0
CA C:GLY156 4.1 33.7 1.0
N C:GLY156 4.6 33.7 1.0
OD2 C:ASP154 4.6 36.6 1.0
O2A C:ADP802 4.6 38.0 1.0
PA C:ADP802 4.7 38.0 1.0
OD2 C:ASP11 4.7 48.3 1.0
CG C:ASP154 4.8 36.6 1.0
CG C:GLN137 4.8 42.2 1.0
CG2 C:VAL339 4.8 43.2 1.0
CB C:GLN137 4.9 42.2 1.0
OD1 C:ASP11 5.0 48.3 1.0
CA C:GLY13 5.0 42.8 1.0
NZ C:LYS18 5.0 43.9 1.0

Magnesium binding site 4 out of 7 in 6uby

Go back to Magnesium Binding Sites List in 6uby
Magnesium binding site 4 out of 7 in the Isolated Cofilin Bound to An Actin Filament


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 4 of Isolated Cofilin Bound to An Actin Filament within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Mg801

b:41.7
occ:1.00
O3B D:ADP802 2.1 38.0 1.0
O2B D:ADP802 2.3 38.0 1.0
PB D:ADP802 2.6 38.0 1.0
OE1 D:GLN137 3.0 42.2 1.0
O3A D:ADP802 3.4 38.0 1.0
CD D:GLN137 3.7 42.2 1.0
O1B D:ADP802 4.0 38.0 1.0
OD1 D:ASP154 4.0 36.6 1.0
NE2 D:GLN137 4.1 42.2 1.0
CA D:GLY156 4.1 33.7 1.0
N D:GLY156 4.6 33.7 1.0
OD2 D:ASP154 4.6 36.6 1.0
O2A D:ADP802 4.6 38.0 1.0
PA D:ADP802 4.7 38.0 1.0
OD2 D:ASP11 4.7 48.3 1.0
CG D:ASP154 4.8 36.6 1.0
CG D:GLN137 4.8 42.2 1.0
CG2 D:VAL339 4.8 43.2 1.0
CB D:GLN137 4.9 42.2 1.0
OD1 D:ASP11 5.0 48.3 1.0
CA D:GLY13 5.0 42.8 1.0
NZ D:LYS18 5.0 43.9 1.0

Magnesium binding site 5 out of 7 in 6uby

Go back to Magnesium Binding Sites List in 6uby
Magnesium binding site 5 out of 7 in the Isolated Cofilin Bound to An Actin Filament


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 5 of Isolated Cofilin Bound to An Actin Filament within 5.0Å range:
probe atom residue distance (Å) B Occ
E:Mg801

b:41.7
occ:1.00
O3B E:ADP802 2.1 38.0 1.0
O2B E:ADP802 2.3 38.0 1.0
PB E:ADP802 2.6 38.0 1.0
OE1 E:GLN137 3.0 42.2 1.0
O3A E:ADP802 3.4 38.0 1.0
CD E:GLN137 3.7 42.2 1.0
O1B E:ADP802 4.0 38.0 1.0
OD1 E:ASP154 4.0 36.6 1.0
NE2 E:GLN137 4.1 42.2 1.0
CA E:GLY156 4.1 33.7 1.0
N E:GLY156 4.6 33.7 1.0
OD2 E:ASP154 4.6 36.6 1.0
O2A E:ADP802 4.6 38.0 1.0
PA E:ADP802 4.7 38.0 1.0
OD2 E:ASP11 4.7 48.3 1.0
CG E:ASP154 4.8 36.6 1.0
CG E:GLN137 4.8 42.2 1.0
CG2 E:VAL339 4.8 43.2 1.0
CB E:GLN137 4.9 42.2 1.0
OD1 E:ASP11 5.0 48.3 1.0
CA E:GLY13 5.0 42.8 1.0
NZ E:LYS18 5.0 43.9 1.0

Magnesium binding site 6 out of 7 in 6uby

Go back to Magnesium Binding Sites List in 6uby
Magnesium binding site 6 out of 7 in the Isolated Cofilin Bound to An Actin Filament


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 6 of Isolated Cofilin Bound to An Actin Filament within 5.0Å range:
probe atom residue distance (Å) B Occ
F:Mg801

b:41.7
occ:1.00
O3B F:ADP802 2.1 38.0 1.0
O2B F:ADP802 2.3 38.0 1.0
PB F:ADP802 2.6 38.0 1.0
OE1 F:GLN137 3.0 42.2 1.0
O3A F:ADP802 3.4 38.0 1.0
CD F:GLN137 3.7 42.2 1.0
O1B F:ADP802 4.0 38.0 1.0
OD1 F:ASP154 4.0 36.6 1.0
NE2 F:GLN137 4.1 42.2 1.0
CA F:GLY156 4.1 33.7 1.0
N F:GLY156 4.6 33.7 1.0
OD2 F:ASP154 4.6 36.6 1.0
O2A F:ADP802 4.6 38.0 1.0
PA F:ADP802 4.7 38.0 1.0
OD2 F:ASP11 4.7 48.3 1.0
CG F:ASP154 4.8 36.6 1.0
CG F:GLN137 4.8 42.2 1.0
CG2 F:VAL339 4.8 43.2 1.0
CB F:GLN137 4.9 42.2 1.0
OD1 F:ASP11 5.0 48.3 1.0
CA F:GLY13 5.0 42.8 1.0
NZ F:LYS18 5.0 43.9 1.0

Magnesium binding site 7 out of 7 in 6uby

Go back to Magnesium Binding Sites List in 6uby
Magnesium binding site 7 out of 7 in the Isolated Cofilin Bound to An Actin Filament


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 7 of Isolated Cofilin Bound to An Actin Filament within 5.0Å range:
probe atom residue distance (Å) B Occ
G:Mg801

b:41.7
occ:1.00
O3B G:ADP802 2.1 38.0 1.0
O2B G:ADP802 2.3 38.0 1.0
PB G:ADP802 2.6 38.0 1.0
O3A G:ADP802 3.4 38.0 1.0
O1B G:ADP802 4.0 38.0 1.0
OE1 H:GLN137 4.0 42.2 1.0
OD1 G:ASP154 4.0 36.6 1.0
CA G:GLY156 4.1 33.7 1.0
N G:GLY156 4.6 33.7 1.0
OD2 G:ASP154 4.6 36.6 1.0
O2A G:ADP802 4.6 38.0 1.0
PA G:ADP802 4.7 38.0 1.0
CG G:ASP154 4.8 36.6 1.0
CD H:GLN137 4.8 42.2 1.0

Reference:

A.R.Huehn, J.P.Bibeau, A.C.Schramm, W.Cao, E.M.De La Cruz, C.V.Sindelar. Structures of Cofilin-Induced Structural Changes Reveal Local and Asymmetric Perturbations of Actin Filaments Proc.Natl.Acad.Sci.Usa 2019.
ISSN: ESSN 1091-6490
DOI: 10.1073/PNAS.1915987117
Page generated: Tue Oct 1 20:53:57 2024

Last articles

Zn in 1BUD
Zn in 1BTG
Zn in 1BT7
Zn in 1BTK
Zn in 1BT0
Zn in 1BSW
Zn in 1BS8
Zn in 1BSK
Zn in 1BS4
Zn in 1BS5
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy