Magnesium in PDB 6uby: Isolated Cofilin Bound to An Actin Filament

The binding sites of Magnesium atom in the Isolated Cofilin Bound to An Actin Filament (pdb code 6uby). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 7 binding sites of Magnesium where determined in the Isolated Cofilin Bound to An Actin Filament, PDB code: 6uby:
Jump to Magnesium binding site number: 1; 2; 3; 4; 5; 6; 7;

Magnesium binding site 1 out of 7 in the Isolated Cofilin Bound to An Actin Filament


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Isolated Cofilin Bound to An Actin Filament within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg801 b:41.7 occ:1.00 O3B A:ADP802 2.1 38.0 1.0 O2B A:ADP802 2.3 38.0 1.0 PB A:ADP802 2.6 38.0 1.0 OE1 A:GLN137 3.0 42.2 1.0 O3A A:ADP802 3.4 38.0 1.0 CD A:GLN137 3.7 42.2 1.0 O1B A:ADP802 4.0 38.0 1.0 OD1 A:ASP154 4.0 36.6 1.0 NE2 A:GLN137 4.1 42.2 1.0 CA A:GLY156 4.1 33.7 1.0 N A:GLY156 4.6 33.7 1.0 OD2 A:ASP154 4.6 36.6 1.0 O2A A:ADP802 4.6 38.0 1.0 PA A:ADP802 4.7 38.0 1.0 OD2 A:ASP11 4.7 48.3 1.0 CG A:ASP154 4.8 36.6 1.0 CG A:GLN137 4.8 42.2 1.0 CG2 A:VAL339 4.8 43.2 1.0 CB A:GLN137 4.9 42.2 1.0 OD1 A:ASP11 5.0 48.3 1.0 CA A:GLY13 5.0 42.8 1.0 NZ A:LYS18 5.0 43.9 1.0

Magnesium binding site 2 out of 7 in the Isolated Cofilin Bound to An Actin Filament


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Isolated Cofilin Bound to An Actin Filament within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg801 b:41.7 occ:1.00 O3B B:ADP802 2.1 38.0 1.0 O2B B:ADP802 2.3 38.0 1.0 PB B:ADP802 2.6 38.0 1.0 OE1 B:GLN137 3.0 42.2 1.0 O3A B:ADP802 3.4 38.0 1.0 CD B:GLN137 3.7 42.2 1.0 O1B B:ADP802 4.0 38.0 1.0 OD1 B:ASP154 4.0 36.6 1.0 NE2 B:GLN137 4.1 42.2 1.0 CA B:GLY156 4.1 33.7 1.0 N B:GLY156 4.6 33.7 1.0 OD2 B:ASP154 4.6 36.6 1.0 O2A B:ADP802 4.6 38.0 1.0 PA B:ADP802 4.7 38.0 1.0 OD2 B:ASP11 4.7 48.3 1.0 CG B:ASP154 4.8 36.6 1.0 CG B:GLN137 4.8 42.2 1.0 CG2 B:VAL339 4.8 43.2 1.0 CB B:GLN137 4.9 42.2 1.0 OD1 B:ASP11 5.0 48.3 1.0 CA B:GLY13 5.0 42.8 1.0 NZ B:LYS18 5.0 43.9 1.0

Magnesium binding site 3 out of 7 in the Isolated Cofilin Bound to An Actin Filament


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of Isolated Cofilin Bound to An Actin Filament within 5.0Å range: probe atom residue distance (Å) B Occ C:Mg801 b:41.7 occ:1.00 O3B C:ADP802 2.1 38.0 1.0 O2B C:ADP802 2.3 38.0 1.0 PB C:ADP802 2.6 38.0 1.0 OE1 C:GLN137 3.0 42.2 1.0 O3A C:ADP802 3.4 38.0 1.0 CD C:GLN137 3.7 42.2 1.0 O1B C:ADP802 4.0 38.0 1.0 OD1 C:ASP154 4.0 36.6 1.0 NE2 C:GLN137 4.1 42.2 1.0 CA C:GLY156 4.1 33.7 1.0 N C:GLY156 4.6 33.7 1.0 OD2 C:ASP154 4.6 36.6 1.0 O2A C:ADP802 4.6 38.0 1.0 PA C:ADP802 4.7 38.0 1.0 OD2 C:ASP11 4.7 48.3 1.0 CG C:ASP154 4.8 36.6 1.0 CG C:GLN137 4.8 42.2 1.0 CG2 C:VAL339 4.8 43.2 1.0 CB C:GLN137 4.9 42.2 1.0 OD1 C:ASP11 5.0 48.3 1.0 CA C:GLY13 5.0 42.8 1.0 NZ C:LYS18 5.0 43.9 1.0

Magnesium binding site 4 out of 7 in the Isolated Cofilin Bound to An Actin Filament


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 4 of Isolated Cofilin Bound to An Actin Filament within 5.0Å range: probe atom residue distance (Å) B Occ D:Mg801 b:41.7 occ:1.00 O3B D:ADP802 2.1 38.0 1.0 O2B D:ADP802 2.3 38.0 1.0 PB D:ADP802 2.6 38.0 1.0 OE1 D:GLN137 3.0 42.2 1.0 O3A D:ADP802 3.4 38.0 1.0 CD D:GLN137 3.7 42.2 1.0 O1B D:ADP802 4.0 38.0 1.0 OD1 D:ASP154 4.0 36.6 1.0 NE2 D:GLN137 4.1 42.2 1.0 CA D:GLY156 4.1 33.7 1.0 N D:GLY156 4.6 33.7 1.0 OD2 D:ASP154 4.6 36.6 1.0 O2A D:ADP802 4.6 38.0 1.0 PA D:ADP802 4.7 38.0 1.0 OD2 D:ASP11 4.7 48.3 1.0 CG D:ASP154 4.8 36.6 1.0 CG D:GLN137 4.8 42.2 1.0 CG2 D:VAL339 4.8 43.2 1.0 CB D:GLN137 4.9 42.2 1.0 OD1 D:ASP11 5.0 48.3 1.0 CA D:GLY13 5.0 42.8 1.0 NZ D:LYS18 5.0 43.9 1.0

Magnesium binding site 5 out of 7 in the Isolated Cofilin Bound to An Actin Filament


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 5 of Isolated Cofilin Bound to An Actin Filament within 5.0Å range: probe atom residue distance (Å) B Occ E:Mg801 b:41.7 occ:1.00 O3B E:ADP802 2.1 38.0 1.0 O2B E:ADP802 2.3 38.0 1.0 PB E:ADP802 2.6 38.0 1.0 OE1 E:GLN137 3.0 42.2 1.0 O3A E:ADP802 3.4 38.0 1.0 CD E:GLN137 3.7 42.2 1.0 O1B E:ADP802 4.0 38.0 1.0 OD1 E:ASP154 4.0 36.6 1.0 NE2 E:GLN137 4.1 42.2 1.0 CA E:GLY156 4.1 33.7 1.0 N E:GLY156 4.6 33.7 1.0 OD2 E:ASP154 4.6 36.6 1.0 O2A E:ADP802 4.6 38.0 1.0 PA E:ADP802 4.7 38.0 1.0 OD2 E:ASP11 4.7 48.3 1.0 CG E:ASP154 4.8 36.6 1.0 CG E:GLN137 4.8 42.2 1.0 CG2 E:VAL339 4.8 43.2 1.0 CB E:GLN137 4.9 42.2 1.0 OD1 E:ASP11 5.0 48.3 1.0 CA E:GLY13 5.0 42.8 1.0 NZ E:LYS18 5.0 43.9 1.0

Magnesium binding site 6 out of 7 in the Isolated Cofilin Bound to An Actin Filament


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 6 of Isolated Cofilin Bound to An Actin Filament within 5.0Å range: probe atom residue distance (Å) B Occ F:Mg801 b:41.7 occ:1.00 O3B F:ADP802 2.1 38.0 1.0 O2B F:ADP802 2.3 38.0 1.0 PB F:ADP802 2.6 38.0 1.0 OE1 F:GLN137 3.0 42.2 1.0 O3A F:ADP802 3.4 38.0 1.0 CD F:GLN137 3.7 42.2 1.0 O1B F:ADP802 4.0 38.0 1.0 OD1 F:ASP154 4.0 36.6 1.0 NE2 F:GLN137 4.1 42.2 1.0 CA F:GLY156 4.1 33.7 1.0 N F:GLY156 4.6 33.7 1.0 OD2 F:ASP154 4.6 36.6 1.0 O2A F:ADP802 4.6 38.0 1.0 PA F:ADP802 4.7 38.0 1.0 OD2 F:ASP11 4.7 48.3 1.0 CG F:ASP154 4.8 36.6 1.0 CG F:GLN137 4.8 42.2 1.0 CG2 F:VAL339 4.8 43.2 1.0 CB F:GLN137 4.9 42.2 1.0 OD1 F:ASP11 5.0 48.3 1.0 CA F:GLY13 5.0 42.8 1.0 NZ F:LYS18 5.0 43.9 1.0

Magnesium binding site 7 out of 7 in the Isolated Cofilin Bound to An Actin Filament


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 7 of Isolated Cofilin Bound to An Actin Filament within 5.0Å range: probe atom residue distance (Å) B Occ G:Mg801 b:41.7 occ:1.00 O3B G:ADP802 2.1 38.0 1.0 O2B G:ADP802 2.3 38.0 1.0 PB G:ADP802 2.6 38.0 1.0 O3A G:ADP802 3.4 38.0 1.0 O1B G:ADP802 4.0 38.0 1.0 OE1 H:GLN137 4.0 42.2 1.0 OD1 G:ASP154 4.0 36.6 1.0 CA G:GLY156 4.1 33.7 1.0 N G:GLY156 4.6 33.7 1.0 OD2 G:ASP154 4.6 36.6 1.0 O2A G:ADP802 4.6 38.0 1.0 PA G:ADP802 4.7 38.0 1.0 CG G:ASP154 4.8 36.6 1.0 CD H:GLN137 4.8 42.2 1.0

A.R.Huehn, J.P.Bibeau, A.C.Schramm, W.Cao, E.M.De La Cruz, C.V.Sindelar. Structures of Cofilin-Induced Structural Changes Reveal Local and Asymmetric Perturbations of Actin Filaments Proc.Natl.Acad.Sci.Usa 2019.
ISSN: ESSN 1091-6490
DOI: 10.1073/PNAS.1915987117