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Magnesium in PDB 6v2m: Structure of Escherichia Coli ASP269ASN Mutant Phosphoenolpyruvate Carboxykinase

Enzymatic activity of Structure of Escherichia Coli ASP269ASN Mutant Phosphoenolpyruvate Carboxykinase

All present enzymatic activity of Structure of Escherichia Coli ASP269ASN Mutant Phosphoenolpyruvate Carboxykinase:
4.1.1.49;

Protein crystallography data

The structure of Structure of Escherichia Coli ASP269ASN Mutant Phosphoenolpyruvate Carboxykinase, PDB code: 6v2m was solved by A.S.Sokaribo, J.H.Cotelesage, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 46.38 / 1.66
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 124.780, 94.220, 46.540, 90.00, 94.79, 90.00
R / Rfree (%) 18.5 / n/a

Other elements in 6v2m:

The structure of Structure of Escherichia Coli ASP269ASN Mutant Phosphoenolpyruvate Carboxykinase also contains other interesting chemical elements:

Calcium (Ca) 1 atom

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Structure of Escherichia Coli ASP269ASN Mutant Phosphoenolpyruvate Carboxykinase (pdb code 6v2m). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Structure of Escherichia Coli ASP269ASN Mutant Phosphoenolpyruvate Carboxykinase, PDB code: 6v2m:

Magnesium binding site 1 out of 1 in 6v2m

Go back to Magnesium Binding Sites List in 6v2m
Magnesium binding site 1 out of 1 in the Structure of Escherichia Coli ASP269ASN Mutant Phosphoenolpyruvate Carboxykinase


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of Escherichia Coli ASP269ASN Mutant Phosphoenolpyruvate Carboxykinase within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg602

b:27.5
occ:1.00
 O3G A:ATP601 2.3 25.6 1.0
OG1 A:THR255 2.3 22.3 1.0
O1A A:ATP601 2.4 23.8 1.0
O2B A:ATP601 2.5 21.9 1.0
O A:TYR286 2.5 26.1 1.0
O A:HOH804 2.7 36.6 1.0
O A:HOH784 3.2 30.2 1.0
CB A:THR255 3.3 20.3 1.0
PB A:ATP601 3.4 22.6 1.0
PA A:ATP601 3.4 24.9 1.0
PG A:ATP601 3.5 23.7 1.0
O3A A:ATP601 3.7 21.9 1.0
C A:TYR286 3.7 26.0 1.0
O3B A:ATP601 3.7 23.4 1.0
NH1 A:ARG333 3.9 24.3 1.0
CA A:ALA287 3.9 21.0 1.0
OD2 A:ASP268 4.1 34.5 1.0
O2G A:ATP601 4.1 31.6 1.0
CG2 A:THR255 4.2 21.1 1.0
O2A A:ATP601 4.2 21.1 1.0
N A:ALA287 4.3 21.1 1.0
N A:THR255 4.3 21.0 1.0
N A:LYS288 4.4 24.4 1.0
CA A:THR255 4.4 22.8 1.0
O A:HOH702 4.5 35.3 1.0
O A:HOH981 4.6 38.1 1.0
C A:ALA287 4.6 25.6 1.0
O1G A:ATP601 4.7 22.0 1.0
O5' A:ATP601 4.8 26.1 1.0
CA A:TYR286 4.9 20.2 1.0
O1B A:ATP601 4.9 21.6 1.0
CB A:ALA287 4.9 26.5 1.0

Reference:

A.S.Sokaribo, J.H.Cotelesage, B.Novakovski, H.Goldie, D.Sanders. Structure of Escherichia Coli ASP269ASN Mutant Phosphoenolpyruvate Carboxykinase To Be Published.
Page generated: Tue Oct 1 21:22:34 2024

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