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Magnesium in PDB 6v4p: Structure of the Integrin ALPHAIIBBETA3-Abciximab Complex

Other elements in 6v4p:

The structure of Structure of the Integrin ALPHAIIBBETA3-Abciximab Complex also contains other interesting chemical elements:

Calcium (Ca) 6 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Structure of the Integrin ALPHAIIBBETA3-Abciximab Complex (pdb code 6v4p). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Structure of the Integrin ALPHAIIBBETA3-Abciximab Complex, PDB code: 6v4p:

Magnesium binding site 1 out of 1 in 6v4p

Go back to Magnesium Binding Sites List in 6v4p
Magnesium binding site 1 out of 1 in the Structure of the Integrin ALPHAIIBBETA3-Abciximab Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of the Integrin ALPHAIIBBETA3-Abciximab Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg701

b:21.6
occ:1.00
OE2 B:GLU220 2.1 10.7 1.0
OG B:SER121 2.7 15.7 1.0
CD B:GLU220 3.2 10.7 1.0
CB B:SER121 3.3 15.7 1.0
OG B:SER123 3.5 10.2 1.0
CG B:GLU220 4.0 10.7 1.0
OD1 B:ASP251 4.0 16.6 1.0
CB B:ALA252 4.0 12.1 1.0
OD2 B:ASP119 4.1 13.8 1.0
OE1 B:GLU220 4.1 10.7 1.0
O B:ALA218 4.2 12.4 1.0
CB B:SER123 4.6 10.2 1.0
OD1 B:ASN215 4.7 9.6 1.0
CA B:SER121 4.7 15.7 1.0
OD1 B:ASP119 4.9 13.8 1.0
CG B:ASP119 4.9 13.8 1.0
CG B:ASP251 5.0 16.6 1.0

Reference:

D.Nesic, Y.Zhang, A.Spasic, J.Li, D.Provasi, M.Filizola, T.Walz, B.S.Coller. Cryo-Electron Microscopy Structure of the Alpha Iib Beta 3-Abciximab Complex. Arterioscler Thromb Vasc 13671 2020BIOL..
ISSN: ESSN 1524-4636
PubMed: 31969014
DOI: 10.1161/ATVBAHA.119.313671
Page generated: Tue Oct 1 21:23:11 2024

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