Magnesium in PDB 6vm5: Structure of Moraxella Osloensis CAP4 Saved/Carf-Domain Containing Receptor

The structure of Structure of Moraxella Osloensis CAP4 Saved/Carf-Domain Containing Receptor, PDB code: 6vm5 was solved by B.Lowey, A.T.Whiteley, A.F.A.Keszei, B.R.Morehouse, S.P.Antine, V.Cabrera, F.Schwede, J.J.Mekalanos, S.Shao, A.S.Y.Lee, P.J.Kranzusch, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	49.36 / 2.35
Space group	P 32 2 1
Cell size a, b, c (Å), α, β, γ (°)	157.593, 157.593, 63.318, 90.00, 90.00, 120.00
R / Rfree (%)	20.7 / 23.4

The binding sites of Magnesium atom in the Structure of Moraxella Osloensis CAP4 Saved/Carf-Domain Containing Receptor (pdb code 6vm5). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Structure of Moraxella Osloensis CAP4 Saved/Carf-Domain Containing Receptor, PDB code: 6vm5:

Magnesium binding site 1 out of 1 in the Structure of Moraxella Osloensis CAP4 Saved/Carf-Domain Containing Receptor


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of Moraxella Osloensis CAP4 Saved/Carf-Domain Containing Receptor within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg501 b:99.8 occ:1.00 O A:HOH662 2.1 80.2 1.0 O A:HOH634 2.2 71.5 1.0 OE2 A:GLU68 3.9 65.0 1.0 OE1 A:GLU68 3.9 64.3 1.0 OD1 A:ASP50 3.9 82.1 1.0 OD2 A:ASP50 4.0 82.0 1.0 NH2 A:ARG85 4.1 79.0 1.0 CD A:GLU68 4.3 63.9 1.0 O A:ILE48 4.4 53.8 1.0 CG A:ASP50 4.4 78.1 1.0 CZ A:ARG85 4.4 75.0 1.0 NH1 A:ARG85 4.8 73.7 1.0 NE A:ARG85 4.9 67.1 1.0

B.Lowey, A.T.Whiteley, A.F.A.Keszei, B.R.Morehouse, S.P.Antine, V.J.Cabrera, D.Kashin, F.Schwede, J.J.Mekalanos, S.Shao, A.S.Y.Lee, P.J.Kranzusch. Cbass Immunity Uses Carf-Related Effectors to Sense 3'-5' and 2'-5'-Linked Cyclic Oligonucleotide Signals and Protect Bacteria From Phage Infection Cell(Cambridge,Mass.) 2020.
ISSN: ISSN 0092-8674
DOI: 10.1016/J.CELL.2020.05.019