Magnesium in PDB 6vpv: Trimeric Photosystem I From the High-Light Tolerant Cyanobacteria Cyanobacterium Aponinum
Enzymatic activity of Trimeric Photosystem I From the High-Light Tolerant Cyanobacteria Cyanobacterium Aponinum
All present enzymatic activity of Trimeric Photosystem I From the High-Light Tolerant Cyanobacteria Cyanobacterium Aponinum:
1.97.1.12;
Other elements in 6vpv:
The structure of Trimeric Photosystem I From the High-Light Tolerant Cyanobacteria Cyanobacterium Aponinum also contains other interesting chemical elements:
Magnesium Binding Sites:
Pages:
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Page 2, Binding sites: 11 -
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Page 4, Binding sites: 31 -
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90;
Page 10, Binding sites: 91 -
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120;
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Page 14, Binding sites: 131 -
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150;
Page 16, Binding sites: 151 -
160;
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170;
Page 18, Binding sites: 171 -
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Page 19, Binding sites: 181 -
190;
Page 20, Binding sites: 191 -
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Page 21, Binding sites: 201 -
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Page 22, Binding sites: 211 -
220;
Page 23, Binding sites: 221 -
230;
Page 24, Binding sites: 231 -
240;
Page 25, Binding sites: 241 -
250;
Page 26, Binding sites: 251 -
260;
Page 27, Binding sites: 261 -
270;
Page 28, Binding sites: 271 -
280;
Page 29, Binding sites: 281 -
288;
Binding sites:
The binding sites of Magnesium atom in the Trimeric Photosystem I From the High-Light Tolerant Cyanobacteria Cyanobacterium Aponinum
(pdb code 6vpv). This binding sites where shown within
5.0 Angstroms radius around Magnesium atom.
In total 288 binding sites of Magnesium where determined in the
Trimeric Photosystem I From the High-Light Tolerant Cyanobacteria Cyanobacterium Aponinum, PDB code: 6vpv:
Jump to Magnesium binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
9;
10;
Magnesium binding site 1 out
of 288 in 6vpv
Go back to
Magnesium Binding Sites List in 6vpv
Magnesium binding site 1 out
of 288 in the Trimeric Photosystem I From the High-Light Tolerant Cyanobacteria Cyanobacterium Aponinum
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 1 of Trimeric Photosystem I From the High-Light Tolerant Cyanobacteria Cyanobacterium Aponinum within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg801
b:60.9
occ:1.00
|
MG
|
A:CL0801
|
0.0
|
60.9
|
1.0
|
NB
|
A:CL0801
|
2.0
|
60.9
|
1.0
|
ND
|
A:CL0801
|
2.0
|
60.9
|
1.0
|
NC
|
A:CL0801
|
2.1
|
60.9
|
1.0
|
NA
|
A:CL0801
|
2.1
|
60.9
|
1.0
|
C4D
|
A:CL0801
|
2.9
|
60.9
|
1.0
|
C1B
|
A:CL0801
|
3.0
|
60.9
|
1.0
|
C4A
|
A:CL0801
|
3.0
|
60.9
|
1.0
|
C4B
|
A:CL0801
|
3.1
|
60.9
|
1.0
|
C1C
|
A:CL0801
|
3.1
|
60.9
|
1.0
|
NE2
|
A:HIS676
|
3.1
|
61.5
|
1.0
|
C1D
|
A:CL0801
|
3.1
|
60.9
|
1.0
|
C4C
|
A:CL0801
|
3.1
|
60.9
|
1.0
|
C1A
|
A:CL0801
|
3.1
|
60.9
|
1.0
|
CHB
|
A:CL0801
|
3.4
|
60.9
|
1.0
|
CHC
|
A:CL0801
|
3.4
|
60.9
|
1.0
|
CHA
|
A:CL0801
|
3.5
|
60.9
|
1.0
|
CAB
|
B:CLA801
|
3.5
|
80.1
|
1.0
|
CHD
|
A:CL0801
|
3.5
|
60.9
|
1.0
|
C3B
|
B:CLA801
|
3.7
|
80.1
|
1.0
|
CHC
|
B:CLA801
|
3.8
|
80.1
|
1.0
|
CD2
|
A:HIS676
|
3.8
|
61.5
|
1.0
|
C4B
|
B:CLA801
|
3.9
|
80.1
|
1.0
|
CE1
|
A:HIS676
|
4.1
|
61.5
|
1.0
|
C3D
|
A:CL0801
|
4.2
|
60.9
|
1.0
|
C2B
|
A:CL0801
|
4.3
|
60.9
|
1.0
|
C3B
|
A:CL0801
|
4.3
|
60.9
|
1.0
|
C2C
|
A:CL0801
|
4.3
|
60.9
|
1.0
|
C2D
|
A:CL0801
|
4.3
|
60.9
|
1.0
|
C3A
|
A:CL0801
|
4.3
|
60.9
|
1.0
|
C3C
|
A:CL0801
|
4.4
|
60.9
|
1.0
|
C2A
|
A:CL0801
|
4.4
|
60.9
|
1.0
|
C2B
|
B:CLA801
|
4.5
|
80.1
|
1.0
|
CBB
|
B:CLA801
|
4.5
|
80.1
|
1.0
|
NB
|
B:CLA801
|
4.6
|
80.1
|
1.0
|
C1C
|
B:CLA801
|
4.6
|
80.1
|
1.0
|
CMA
|
A:CL0801
|
4.9
|
60.9
|
1.0
|
CBD
|
A:CL0801
|
4.9
|
60.9
|
1.0
|
|
Magnesium binding site 2 out
of 288 in 6vpv
Go back to
Magnesium Binding Sites List in 6vpv
Magnesium binding site 2 out
of 288 in the Trimeric Photosystem I From the High-Light Tolerant Cyanobacteria Cyanobacterium Aponinum
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 2 of Trimeric Photosystem I From the High-Light Tolerant Cyanobacteria Cyanobacterium Aponinum within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg802
b:80.1
occ:1.00
|
MG
|
A:CLA802
|
0.0
|
80.1
|
1.0
|
NB
|
A:CLA802
|
2.0
|
80.1
|
1.0
|
ND
|
A:CLA802
|
2.0
|
80.1
|
1.0
|
NA
|
A:CLA802
|
2.1
|
80.1
|
1.0
|
NC
|
A:CLA802
|
2.1
|
80.1
|
1.0
|
C4D
|
A:CLA802
|
2.9
|
80.1
|
1.0
|
C1B
|
A:CLA802
|
3.0
|
80.1
|
1.0
|
C4A
|
A:CLA802
|
3.0
|
80.1
|
1.0
|
C4B
|
A:CLA802
|
3.1
|
80.1
|
1.0
|
C1C
|
A:CLA802
|
3.1
|
80.1
|
1.0
|
C4C
|
A:CLA802
|
3.1
|
80.1
|
1.0
|
C1D
|
A:CLA802
|
3.1
|
80.1
|
1.0
|
C1A
|
A:CLA802
|
3.1
|
80.1
|
1.0
|
CHB
|
A:CLA802
|
3.4
|
80.1
|
1.0
|
CHC
|
A:CLA802
|
3.4
|
80.1
|
1.0
|
CHA
|
A:CLA802
|
3.5
|
80.1
|
1.0
|
SD
|
A:MET684
|
3.5
|
63.9
|
1.0
|
CHD
|
A:CLA802
|
3.5
|
80.1
|
1.0
|
NE1
|
B:TRP589
|
3.6
|
64.4
|
1.0
|
CZ2
|
B:TRP589
|
3.9
|
64.4
|
1.0
|
CE2
|
B:TRP589
|
4.1
|
64.4
|
1.0
|
CG
|
A:MET684
|
4.1
|
63.9
|
1.0
|
CE
|
A:MET684
|
4.2
|
63.9
|
1.0
|
C2B
|
A:CLA802
|
4.2
|
80.1
|
1.0
|
C3D
|
A:CLA802
|
4.2
|
80.1
|
1.0
|
C3B
|
A:CLA802
|
4.3
|
80.1
|
1.0
|
C2C
|
A:CLA802
|
4.3
|
80.1
|
1.0
|
C2D
|
A:CLA802
|
4.3
|
80.1
|
1.0
|
CB
|
A:MET684
|
4.3
|
63.9
|
1.0
|
C3C
|
A:CLA802
|
4.3
|
80.1
|
1.0
|
C3A
|
A:CLA802
|
4.4
|
80.1
|
1.0
|
C2A
|
A:CLA802
|
4.4
|
80.1
|
1.0
|
CBB
|
A:CLA852
|
4.5
|
65.7
|
1.0
|
CD1
|
B:TRP589
|
4.8
|
64.4
|
1.0
|
CMC
|
A:CLA852
|
4.9
|
65.7
|
1.0
|
CAA
|
A:CLA802
|
4.9
|
80.1
|
1.0
|
CBD
|
A:CLA802
|
4.9
|
80.1
|
1.0
|
|
Magnesium binding site 3 out
of 288 in 6vpv
Go back to
Magnesium Binding Sites List in 6vpv
Magnesium binding site 3 out
of 288 in the Trimeric Photosystem I From the High-Light Tolerant Cyanobacteria Cyanobacterium Aponinum
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 3 of Trimeric Photosystem I From the High-Light Tolerant Cyanobacteria Cyanobacterium Aponinum within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg803
b:80.1
occ:1.00
|
MG
|
A:CLA803
|
0.0
|
80.1
|
1.0
|
NB
|
A:CLA803
|
2.0
|
80.1
|
1.0
|
ND
|
A:CLA803
|
2.0
|
80.1
|
1.0
|
NC
|
A:CLA803
|
2.1
|
80.1
|
1.0
|
NA
|
A:CLA803
|
2.1
|
80.1
|
1.0
|
C4D
|
A:CLA803
|
2.9
|
80.1
|
1.0
|
C1B
|
A:CLA803
|
3.0
|
80.1
|
1.0
|
C4A
|
A:CLA803
|
3.0
|
80.1
|
1.0
|
C4B
|
A:CLA803
|
3.0
|
80.1
|
1.0
|
C1C
|
A:CLA803
|
3.1
|
80.1
|
1.0
|
C4C
|
A:CLA803
|
3.1
|
80.1
|
1.0
|
C1D
|
A:CLA803
|
3.1
|
80.1
|
1.0
|
C1A
|
A:CLA803
|
3.1
|
80.1
|
1.0
|
CHB
|
A:CLA803
|
3.4
|
80.1
|
1.0
|
CHC
|
A:CLA803
|
3.4
|
80.1
|
1.0
|
CHA
|
A:CLA803
|
3.4
|
80.1
|
1.0
|
CHD
|
A:CLA803
|
3.5
|
80.1
|
1.0
|
CBB
|
B:CLA802
|
3.5
|
80.1
|
1.0
|
CAB
|
B:CLA802
|
3.9
|
80.1
|
1.0
|
OD1
|
A:ASN600
|
4.1
|
59.2
|
1.0
|
C3D
|
A:CLA803
|
4.2
|
80.1
|
1.0
|
C3B
|
A:CLA803
|
4.3
|
80.1
|
1.0
|
C2B
|
A:CLA803
|
4.3
|
80.1
|
1.0
|
C3C
|
A:CLA803
|
4.3
|
80.1
|
1.0
|
C2C
|
A:CLA803
|
4.3
|
80.1
|
1.0
|
C2D
|
A:CLA803
|
4.3
|
80.1
|
1.0
|
C3A
|
A:CLA803
|
4.4
|
80.1
|
1.0
|
C19
|
A:CL0801
|
4.4
|
60.9
|
1.0
|
C2A
|
A:CLA803
|
4.4
|
80.1
|
1.0
|
CB
|
B:ALA665
|
4.6
|
54.8
|
1.0
|
C2
|
A:CL0801
|
4.8
|
60.9
|
1.0
|
C3
|
A:CL0801
|
4.8
|
60.9
|
1.0
|
C5
|
A:CL0801
|
4.8
|
60.9
|
1.0
|
C3B
|
B:CLA802
|
4.8
|
80.1
|
1.0
|
CBD
|
A:CLA803
|
4.9
|
80.1
|
1.0
|
CG
|
A:ASN600
|
4.9
|
59.2
|
1.0
|
|
Magnesium binding site 4 out
of 288 in 6vpv
Go back to
Magnesium Binding Sites List in 6vpv
Magnesium binding site 4 out
of 288 in the Trimeric Photosystem I From the High-Light Tolerant Cyanobacteria Cyanobacterium Aponinum
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 4 of Trimeric Photosystem I From the High-Light Tolerant Cyanobacteria Cyanobacterium Aponinum within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg804
b:85.3
occ:1.00
|
MG
|
A:CLA804
|
0.0
|
85.3
|
1.0
|
NB
|
A:CLA804
|
2.0
|
85.3
|
1.0
|
ND
|
A:CLA804
|
2.0
|
85.3
|
1.0
|
NA
|
A:CLA804
|
2.1
|
85.3
|
1.0
|
NC
|
A:CLA804
|
2.1
|
85.3
|
1.0
|
C4D
|
A:CLA804
|
2.9
|
85.3
|
1.0
|
C1B
|
A:CLA804
|
3.0
|
85.3
|
1.0
|
C4A
|
A:CLA804
|
3.0
|
85.3
|
1.0
|
C4B
|
A:CLA804
|
3.1
|
85.3
|
1.0
|
C1C
|
A:CLA804
|
3.1
|
85.3
|
1.0
|
C4C
|
A:CLA804
|
3.1
|
85.3
|
1.0
|
C1A
|
A:CLA804
|
3.1
|
85.3
|
1.0
|
C1D
|
A:CLA804
|
3.1
|
85.3
|
1.0
|
CE1
|
A:HIS56
|
3.2
|
79.2
|
1.0
|
CHB
|
A:CLA804
|
3.4
|
85.3
|
1.0
|
CHC
|
A:CLA804
|
3.4
|
85.3
|
1.0
|
CHA
|
A:CLA804
|
3.5
|
85.3
|
1.0
|
CHD
|
A:CLA804
|
3.5
|
85.3
|
1.0
|
C7
|
A:CLA811
|
3.5
|
88.9
|
1.0
|
NE2
|
A:HIS56
|
3.9
|
79.2
|
1.0
|
C5
|
A:CLA811
|
4.1
|
88.9
|
1.0
|
C8
|
A:CLA811
|
4.2
|
88.9
|
1.0
|
C3D
|
A:CLA804
|
4.2
|
85.3
|
1.0
|
C10
|
A:CLA811
|
4.3
|
88.9
|
1.0
|
C2B
|
A:CLA804
|
4.3
|
85.3
|
1.0
|
C9
|
A:CLA811
|
4.3
|
88.9
|
1.0
|
ND1
|
A:HIS56
|
4.3
|
79.2
|
1.0
|
C3B
|
A:CLA804
|
4.3
|
85.3
|
1.0
|
C2C
|
A:CLA804
|
4.3
|
85.3
|
1.0
|
C2D
|
A:CLA804
|
4.3
|
85.3
|
1.0
|
C3C
|
A:CLA804
|
4.4
|
85.3
|
1.0
|
C3A
|
A:CLA804
|
4.4
|
85.3
|
1.0
|
C6
|
A:CLA811
|
4.4
|
88.9
|
1.0
|
C2A
|
A:CLA804
|
4.4
|
85.3
|
1.0
|
CBD
|
A:CLA804
|
4.9
|
85.3
|
1.0
|
|
Magnesium binding site 5 out
of 288 in 6vpv
Go back to
Magnesium Binding Sites List in 6vpv
Magnesium binding site 5 out
of 288 in the Trimeric Photosystem I From the High-Light Tolerant Cyanobacteria Cyanobacterium Aponinum
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 5 of Trimeric Photosystem I From the High-Light Tolerant Cyanobacteria Cyanobacterium Aponinum within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg805
b:73.8
occ:1.00
|
MG
|
A:CLA805
|
0.0
|
73.8
|
1.0
|
NB
|
A:CLA805
|
2.0
|
73.8
|
1.0
|
ND
|
A:CLA805
|
2.0
|
73.8
|
1.0
|
NC
|
A:CLA805
|
2.1
|
73.8
|
1.0
|
NA
|
A:CLA805
|
2.1
|
73.8
|
1.0
|
C4D
|
A:CLA805
|
2.9
|
73.8
|
1.0
|
C1B
|
A:CLA805
|
3.0
|
73.8
|
1.0
|
NE2
|
A:HIS76
|
3.0
|
77.2
|
1.0
|
C4A
|
A:CLA805
|
3.0
|
73.8
|
1.0
|
C4B
|
A:CLA805
|
3.0
|
73.8
|
1.0
|
C1C
|
A:CLA805
|
3.0
|
73.8
|
1.0
|
C4C
|
A:CLA805
|
3.1
|
73.8
|
1.0
|
C1A
|
A:CLA805
|
3.1
|
73.8
|
1.0
|
C1D
|
A:CLA805
|
3.1
|
73.8
|
1.0
|
CHB
|
A:CLA805
|
3.4
|
73.8
|
1.0
|
CMB
|
A:CLA830
|
3.4
|
80.1
|
1.0
|
CHC
|
A:CLA805
|
3.4
|
73.8
|
1.0
|
CHA
|
A:CLA805
|
3.5
|
73.8
|
1.0
|
CHD
|
A:CLA805
|
3.5
|
73.8
|
1.0
|
CD2
|
A:HIS76
|
3.6
|
77.2
|
1.0
|
CE1
|
A:HIS76
|
4.2
|
77.2
|
1.0
|
C2C
|
A:CLA805
|
4.2
|
73.8
|
1.0
|
C3D
|
A:CLA805
|
4.2
|
73.8
|
1.0
|
C3C
|
A:CLA805
|
4.3
|
73.8
|
1.0
|
C2B
|
A:CLA805
|
4.3
|
73.8
|
1.0
|
C3B
|
A:CLA805
|
4.3
|
73.8
|
1.0
|
C2D
|
A:CLA805
|
4.3
|
73.8
|
1.0
|
C3A
|
A:CLA805
|
4.4
|
73.8
|
1.0
|
C2B
|
A:CLA830
|
4.4
|
80.1
|
1.0
|
C2A
|
A:CLA805
|
4.4
|
73.8
|
1.0
|
CBB
|
A:CLA830
|
4.6
|
80.1
|
1.0
|
CG2
|
A:ILE72
|
4.8
|
80.3
|
1.0
|
CG
|
A:HIS76
|
4.8
|
77.2
|
1.0
|
CBD
|
A:CLA805
|
4.9
|
73.8
|
1.0
|
|
Magnesium binding site 6 out
of 288 in 6vpv
Go back to
Magnesium Binding Sites List in 6vpv
Magnesium binding site 6 out
of 288 in the Trimeric Photosystem I From the High-Light Tolerant Cyanobacteria Cyanobacterium Aponinum
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 6 of Trimeric Photosystem I From the High-Light Tolerant Cyanobacteria Cyanobacterium Aponinum within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg806
b:80.1
occ:1.00
|
MG
|
A:CLA806
|
0.0
|
80.1
|
1.0
|
NB
|
A:CLA806
|
2.0
|
80.1
|
1.0
|
ND
|
A:CLA806
|
2.0
|
80.1
|
1.0
|
NC
|
A:CLA806
|
2.1
|
80.1
|
1.0
|
NA
|
A:CLA806
|
2.1
|
80.1
|
1.0
|
C4D
|
A:CLA806
|
2.9
|
80.1
|
1.0
|
C1B
|
A:CLA806
|
3.0
|
80.1
|
1.0
|
C4A
|
A:CLA806
|
3.0
|
80.1
|
1.0
|
C4B
|
A:CLA806
|
3.1
|
80.1
|
1.0
|
C1C
|
A:CLA806
|
3.1
|
80.1
|
1.0
|
NE2
|
A:HIS79
|
3.1
|
75.8
|
1.0
|
C4C
|
A:CLA806
|
3.1
|
80.1
|
1.0
|
C1D
|
A:CLA806
|
3.1
|
80.1
|
1.0
|
C1A
|
A:CLA806
|
3.1
|
80.1
|
1.0
|
CHB
|
A:CLA806
|
3.4
|
80.1
|
1.0
|
CHC
|
A:CLA806
|
3.4
|
80.1
|
1.0
|
CHA
|
A:CLA806
|
3.5
|
80.1
|
1.0
|
CHD
|
A:CLA806
|
3.5
|
80.1
|
1.0
|
C17
|
A:CLA806
|
3.6
|
80.1
|
1.0
|
CD2
|
A:HIS79
|
3.7
|
75.8
|
1.0
|
C15
|
A:CLA806
|
4.0
|
80.1
|
1.0
|
C3D
|
A:CLA806
|
4.2
|
80.1
|
1.0
|
CE1
|
A:HIS79
|
4.3
|
75.8
|
1.0
|
C2B
|
A:CLA806
|
4.3
|
80.1
|
1.0
|
C3B
|
A:CLA806
|
4.3
|
80.1
|
1.0
|
C2C
|
A:CLA806
|
4.3
|
80.1
|
1.0
|
C16
|
A:CLA806
|
4.3
|
80.1
|
1.0
|
C3C
|
A:CLA806
|
4.3
|
80.1
|
1.0
|
C2D
|
A:CLA806
|
4.3
|
80.1
|
1.0
|
C3A
|
A:CLA806
|
4.4
|
80.1
|
1.0
|
C2A
|
A:CLA806
|
4.4
|
80.1
|
1.0
|
C18
|
A:CLA806
|
4.8
|
80.1
|
1.0
|
CBD
|
A:CLA806
|
4.9
|
80.1
|
1.0
|
CG
|
A:HIS79
|
5.0
|
75.8
|
1.0
|
CMA
|
A:CLA806
|
5.0
|
80.1
|
1.0
|
|
Magnesium binding site 7 out
of 288 in 6vpv
Go back to
Magnesium Binding Sites List in 6vpv
Magnesium binding site 7 out
of 288 in the Trimeric Photosystem I From the High-Light Tolerant Cyanobacteria Cyanobacterium Aponinum
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 7 of Trimeric Photosystem I From the High-Light Tolerant Cyanobacteria Cyanobacterium Aponinum within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg807
b:88.5
occ:1.00
|
MG
|
A:CLA807
|
0.0
|
88.5
|
1.0
|
NB
|
A:CLA807
|
2.0
|
88.5
|
1.0
|
ND
|
A:CLA807
|
2.0
|
88.5
|
1.0
|
NC
|
A:CLA807
|
2.1
|
88.5
|
1.0
|
NA
|
A:CLA807
|
2.1
|
88.5
|
1.0
|
C4D
|
A:CLA807
|
2.9
|
88.5
|
1.0
|
C1B
|
A:CLA807
|
3.0
|
88.5
|
1.0
|
C4B
|
A:CLA807
|
3.0
|
88.5
|
1.0
|
C4A
|
A:CLA807
|
3.1
|
88.5
|
1.0
|
C1C
|
A:CLA807
|
3.1
|
88.5
|
1.0
|
C1A
|
A:CLA807
|
3.1
|
88.5
|
1.0
|
C4C
|
A:CLA807
|
3.1
|
88.5
|
1.0
|
C1D
|
A:CLA807
|
3.1
|
88.5
|
1.0
|
CE1
|
A:HIS93
|
3.2
|
85.9
|
1.0
|
CHB
|
A:CLA807
|
3.4
|
88.5
|
1.0
|
CHC
|
A:CLA807
|
3.4
|
88.5
|
1.0
|
CHA
|
A:CLA807
|
3.5
|
88.5
|
1.0
|
CHD
|
A:CLA807
|
3.5
|
88.5
|
1.0
|
NE2
|
A:HIS93
|
3.6
|
85.9
|
1.0
|
C3D
|
A:CLA807
|
4.2
|
88.5
|
1.0
|
C2B
|
A:CLA807
|
4.3
|
88.5
|
1.0
|
C3B
|
A:CLA807
|
4.3
|
88.5
|
1.0
|
C2C
|
A:CLA807
|
4.3
|
88.5
|
1.0
|
C2D
|
A:CLA807
|
4.3
|
88.5
|
1.0
|
C3C
|
A:CLA807
|
4.4
|
88.5
|
1.0
|
ND1
|
A:HIS93
|
4.4
|
85.9
|
1.0
|
C3A
|
A:CLA807
|
4.4
|
88.5
|
1.0
|
C2A
|
A:CLA807
|
4.4
|
88.5
|
1.0
|
CBA
|
A:CLA807
|
4.8
|
88.5
|
1.0
|
CD2
|
A:HIS93
|
4.9
|
85.9
|
1.0
|
CBD
|
A:CLA807
|
4.9
|
88.5
|
1.0
|
|
Magnesium binding site 8 out
of 288 in 6vpv
Go back to
Magnesium Binding Sites List in 6vpv
Magnesium binding site 8 out
of 288 in the Trimeric Photosystem I From the High-Light Tolerant Cyanobacteria Cyanobacterium Aponinum
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 8 of Trimeric Photosystem I From the High-Light Tolerant Cyanobacteria Cyanobacterium Aponinum within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg808
b:80.1
occ:1.00
|
MG
|
A:CLA808
|
0.0
|
80.1
|
1.0
|
NB
|
A:CLA808
|
2.0
|
80.1
|
1.0
|
ND
|
A:CLA808
|
2.0
|
80.1
|
1.0
|
NA
|
A:CLA808
|
2.1
|
80.1
|
1.0
|
NC
|
A:CLA808
|
2.1
|
80.1
|
1.0
|
C4D
|
A:CLA808
|
2.9
|
80.1
|
1.0
|
C1B
|
A:CLA808
|
3.0
|
80.1
|
1.0
|
C4A
|
A:CLA808
|
3.0
|
80.1
|
1.0
|
C4B
|
A:CLA808
|
3.0
|
80.1
|
1.0
|
C1C
|
A:CLA808
|
3.1
|
80.1
|
1.0
|
OE1
|
A:GLN115
|
3.1
|
85.2
|
1.0
|
C1A
|
A:CLA808
|
3.1
|
80.1
|
1.0
|
C4C
|
A:CLA808
|
3.1
|
80.1
|
1.0
|
C1D
|
A:CLA808
|
3.1
|
80.1
|
1.0
|
CHB
|
A:CLA808
|
3.4
|
80.1
|
1.0
|
CHC
|
A:CLA808
|
3.4
|
80.1
|
1.0
|
CHA
|
A:CLA808
|
3.5
|
80.1
|
1.0
|
NE2
|
A:GLN115
|
3.5
|
85.2
|
1.0
|
CHD
|
A:CLA808
|
3.5
|
80.1
|
1.0
|
CD
|
A:GLN115
|
3.6
|
85.2
|
1.0
|
C2
|
A:CLA828
|
3.9
|
80.1
|
1.0
|
C3
|
A:CLA828
|
4.1
|
80.1
|
1.0
|
C3D
|
A:CLA808
|
4.2
|
80.1
|
1.0
|
C2B
|
A:CLA808
|
4.3
|
80.1
|
1.0
|
C3B
|
A:CLA808
|
4.3
|
80.1
|
1.0
|
C2C
|
A:CLA808
|
4.3
|
80.1
|
1.0
|
C3C
|
A:CLA808
|
4.3
|
80.1
|
1.0
|
C2D
|
A:CLA808
|
4.3
|
80.1
|
1.0
|
C5
|
A:CLA828
|
4.4
|
80.1
|
1.0
|
C3A
|
A:CLA808
|
4.4
|
80.1
|
1.0
|
C2A
|
A:CLA808
|
4.4
|
80.1
|
1.0
|
O2A
|
A:CLA828
|
4.4
|
80.1
|
1.0
|
C1
|
A:CLA828
|
4.4
|
80.1
|
1.0
|
C4
|
A:CLA828
|
4.6
|
80.1
|
1.0
|
CBD
|
A:CLA808
|
4.9
|
80.1
|
1.0
|
CBA
|
A:CLA808
|
4.9
|
80.1
|
1.0
|
|
Magnesium binding site 9 out
of 288 in 6vpv
Go back to
Magnesium Binding Sites List in 6vpv
Magnesium binding site 9 out
of 288 in the Trimeric Photosystem I From the High-Light Tolerant Cyanobacteria Cyanobacterium Aponinum
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 9 of Trimeric Photosystem I From the High-Light Tolerant Cyanobacteria Cyanobacterium Aponinum within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg809
b:86.4
occ:1.00
|
MG
|
A:CLA809
|
0.0
|
86.4
|
1.0
|
NB
|
A:CLA809
|
2.0
|
86.4
|
1.0
|
ND
|
A:CLA809
|
2.0
|
86.4
|
1.0
|
NC
|
A:CLA809
|
2.1
|
86.4
|
1.0
|
NA
|
A:CLA809
|
2.1
|
86.4
|
1.0
|
C4D
|
A:CLA809
|
2.9
|
86.4
|
1.0
|
C1B
|
A:CLA809
|
3.0
|
86.4
|
1.0
|
OE1
|
A:GLN123
|
3.0
|
90.3
|
1.0
|
C4A
|
A:CLA809
|
3.0
|
86.4
|
1.0
|
C4B
|
A:CLA809
|
3.1
|
86.4
|
1.0
|
C1C
|
A:CLA809
|
3.1
|
86.4
|
1.0
|
C1D
|
A:CLA809
|
3.1
|
86.4
|
1.0
|
C4C
|
A:CLA809
|
3.1
|
86.4
|
1.0
|
C1A
|
A:CLA809
|
3.2
|
86.4
|
1.0
|
CHB
|
A:CLA809
|
3.4
|
86.4
|
1.0
|
CHC
|
A:CLA809
|
3.4
|
86.4
|
1.0
|
CHA
|
A:CLA809
|
3.5
|
86.4
|
1.0
|
CHD
|
A:CLA809
|
3.5
|
86.4
|
1.0
|
C13
|
A:CLA828
|
3.8
|
80.1
|
1.0
|
C12
|
A:CLA828
|
4.0
|
80.1
|
1.0
|
CD
|
A:GLN123
|
4.0
|
90.3
|
1.0
|
C3D
|
A:CLA809
|
4.2
|
86.4
|
1.0
|
C2B
|
A:CLA809
|
4.3
|
86.4
|
1.0
|
C3B
|
A:CLA809
|
4.3
|
86.4
|
1.0
|
C2C
|
A:CLA809
|
4.3
|
86.4
|
1.0
|
C2D
|
A:CLA809
|
4.3
|
86.4
|
1.0
|
C3C
|
A:CLA809
|
4.4
|
86.4
|
1.0
|
NE2
|
A:GLN123
|
4.4
|
90.3
|
1.0
|
C3A
|
A:CLA809
|
4.4
|
86.4
|
1.0
|
C2A
|
A:CLA809
|
4.5
|
86.4
|
1.0
|
CBB
|
A:CLA808
|
4.6
|
80.1
|
1.0
|
C15
|
A:CLA828
|
4.6
|
80.1
|
1.0
|
C14
|
A:CLA828
|
4.7
|
80.1
|
1.0
|
CBD
|
A:CLA809
|
4.9
|
86.4
|
1.0
|
|
Magnesium binding site 10 out
of 288 in 6vpv
Go back to
Magnesium Binding Sites List in 6vpv
Magnesium binding site 10 out
of 288 in the Trimeric Photosystem I From the High-Light Tolerant Cyanobacteria Cyanobacterium Aponinum
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 10 of Trimeric Photosystem I From the High-Light Tolerant Cyanobacteria Cyanobacterium Aponinum within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg810
b:86.3
occ:1.00
|
MG
|
A:CLA810
|
0.0
|
86.3
|
1.0
|
NB
|
A:CLA810
|
2.0
|
86.3
|
1.0
|
ND
|
A:CLA810
|
2.0
|
86.3
|
1.0
|
NC
|
A:CLA810
|
2.1
|
86.3
|
1.0
|
NA
|
A:CLA810
|
2.1
|
86.3
|
1.0
|
C4D
|
A:CLA810
|
2.9
|
86.3
|
1.0
|
C1B
|
A:CLA810
|
3.0
|
86.3
|
1.0
|
C4A
|
A:CLA810
|
3.0
|
86.3
|
1.0
|
C4B
|
A:CLA810
|
3.1
|
86.3
|
1.0
|
C1C
|
A:CLA810
|
3.1
|
86.3
|
1.0
|
NE2
|
A:HIS179
|
3.1
|
87.5
|
1.0
|
C4C
|
A:CLA810
|
3.1
|
86.3
|
1.0
|
C1A
|
A:CLA810
|
3.1
|
86.3
|
1.0
|
C1D
|
A:CLA810
|
3.1
|
86.3
|
1.0
|
CHB
|
A:CLA810
|
3.4
|
86.3
|
1.0
|
CHC
|
A:CLA810
|
3.4
|
86.3
|
1.0
|
CE1
|
A:HIS179
|
3.4
|
87.5
|
1.0
|
CHA
|
A:CLA810
|
3.5
|
86.3
|
1.0
|
CHD
|
A:CLA810
|
3.5
|
86.3
|
1.0
|
C3D
|
A:CLA810
|
4.2
|
86.3
|
1.0
|
C2B
|
A:CLA810
|
4.3
|
86.3
|
1.0
|
C3B
|
A:CLA810
|
4.3
|
86.3
|
1.0
|
C2C
|
A:CLA810
|
4.3
|
86.3
|
1.0
|
C3C
|
A:CLA810
|
4.3
|
86.3
|
1.0
|
C2D
|
A:CLA810
|
4.3
|
86.3
|
1.0
|
CD2
|
A:HIS179
|
4.4
|
87.5
|
1.0
|
C3A
|
A:CLA810
|
4.4
|
86.3
|
1.0
|
C2A
|
A:CLA810
|
4.4
|
86.3
|
1.0
|
ND1
|
A:HIS179
|
4.7
|
87.5
|
1.0
|
CBD
|
A:CLA810
|
4.9
|
86.3
|
1.0
|
|
Reference:
Z.Dobson,
H.Toporik,
N.Vaughn,
S.Lin,
D.Williams,
P.Fromme,
Y.Mazor.
Trimeric Photosystem I From the High-Light Tolerant Cyanobacteria Cyanobacterium Aponinum To Be Published.
Page generated: Tue Oct 1 22:13:10 2024
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