Magnesium in PDB 6vqt: Structure of A Bacterial ATM1-Family Abc Exporter with MGADPVO4 Bound

Other elements in 6vqt:

The structure of Structure of A Bacterial ATM1-Family Abc Exporter with MGADPVO4 Bound also contains other interesting chemical elements:

Vanadium (V) 2 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Structure of A Bacterial ATM1-Family Abc Exporter with MGADPVO4 Bound (pdb code 6vqt). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Structure of A Bacterial ATM1-Family Abc Exporter with MGADPVO4 Bound, PDB code: 6vqt:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in 6vqt

Go back to Magnesium Binding Sites List in 6vqt
Magnesium binding site 1 out of 2 in the Structure of A Bacterial ATM1-Family Abc Exporter with MGADPVO4 Bound


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of A Bacterial ATM1-Family Abc Exporter with MGADPVO4 Bound within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg703

b:89.5
occ:1.00
O3B A:ADP701 1.9 84.7 1.0
O4 A:VO4702 2.0 99.7 1.0
O1B A:ADP701 2.1 84.7 1.0
OG A:SER401 2.2 80.1 1.0
PB A:ADP701 2.3 84.7 1.0
O2A A:ADP701 2.5 84.7 1.0
V A:VO4702 3.0 99.7 1.0
OE1 A:GLN442 3.1 88.6 1.0
PA A:ADP701 3.1 84.7 1.0
O3A A:ADP701 3.1 84.7 1.0
O1A A:ADP701 3.1 84.7 1.0
CB A:SER401 3.5 80.1 1.0
O2B A:ADP701 3.7 84.7 1.0
CD A:GLN442 4.0 88.6 1.0
O2 A:VO4702 4.0 99.7 1.0
O3 A:VO4702 4.1 99.7 1.0
N A:SER401 4.2 80.1 1.0
OG B:SER499 4.2 89.4 1.0
NE2 A:GLN442 4.3 88.6 1.0
CG A:LYS400 4.4 78.7 1.0
CA A:SER401 4.4 80.1 1.0
O1 A:VO4702 4.5 99.7 1.0
O5' A:ADP701 4.7 84.7 1.0
CB B:SER499 4.8 89.4 1.0

Magnesium binding site 2 out of 2 in 6vqt

Go back to Magnesium Binding Sites List in 6vqt
Magnesium binding site 2 out of 2 in the Structure of A Bacterial ATM1-Family Abc Exporter with MGADPVO4 Bound


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Structure of A Bacterial ATM1-Family Abc Exporter with MGADPVO4 Bound within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg702

b:90.2
occ:1.00
V A:VO4704 1.7 95.4 1.0
O2B B:ADP701 1.9 84.6 1.0
O4 A:VO4704 1.9 95.4 1.0
O2 A:VO4704 2.0 95.4 1.0
OG B:SER401 2.6 80.2 1.0
PB B:ADP701 2.8 84.6 1.0
O3B B:ADP701 3.0 84.6 1.0
O3 A:VO4704 3.2 95.4 1.0
O1 A:VO4704 3.2 95.4 1.0
OE1 B:GLN442 3.3 89.6 1.0
OG A:SER499 3.3 88.8 1.0
O1B B:ADP701 3.4 84.6 1.0
OE1 B:GLU523 4.0 97.9 1.0
CB B:SER401 4.0 80.2 1.0
CD B:GLN442 4.0 89.6 1.0
NE2 B:GLN442 4.2 89.6 1.0
O2A B:ADP701 4.2 84.6 1.0
O3A B:ADP701 4.3 84.6 1.0
NZ B:LYS400 4.6 78.2 1.0
CB A:SER499 4.6 88.8 1.0
CD B:GLU523 4.7 97.9 1.0
CG B:LYS400 4.8 78.2 1.0
N B:SER401 4.8 80.2 1.0
PA B:ADP701 4.9 84.6 1.0
CA B:SER401 5.0 80.2 1.0

Reference:

C.Fan, J.T.Kaiser, D.C.Rees. A Structural Framework For Unidirectional Transport By A Bacterial Abc Exporter. Proc.Natl.Acad.Sci.Usa V. 117 19228 2020.
ISSN: ESSN 1091-6490
PubMed: 32703810
DOI: 10.1073/PNAS.2006526117
Page generated: Tue Dec 15 01:26:40 2020

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