Magnesium in PDB 6vz4: Cryo-Em Structure of STH1-ARP7-ARP9-RTT102 Bound to the Nucleosome in Adp Beryllium Fluoride State

Enzymatic activity of Cryo-Em Structure of STH1-ARP7-ARP9-RTT102 Bound to the Nucleosome in Adp Beryllium Fluoride State

All present enzymatic activity of Cryo-Em Structure of STH1-ARP7-ARP9-RTT102 Bound to the Nucleosome in Adp Beryllium Fluoride State:
3.6.4.12;

Other elements in 6vz4:

The structure of Cryo-Em Structure of STH1-ARP7-ARP9-RTT102 Bound to the Nucleosome in Adp Beryllium Fluoride State also contains other interesting chemical elements:

Fluorine (F) 30 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Cryo-Em Structure of STH1-ARP7-ARP9-RTT102 Bound to the Nucleosome in Adp Beryllium Fluoride State (pdb code 6vz4). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Cryo-Em Structure of STH1-ARP7-ARP9-RTT102 Bound to the Nucleosome in Adp Beryllium Fluoride State, PDB code: 6vz4:

Magnesium binding site 1 out of 1 in 6vz4

Go back to Magnesium Binding Sites List in 6vz4
Magnesium binding site 1 out of 1 in the Cryo-Em Structure of STH1-ARP7-ARP9-RTT102 Bound to the Nucleosome in Adp Beryllium Fluoride State


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Cryo-Em Structure of STH1-ARP7-ARP9-RTT102 Bound to the Nucleosome in Adp Beryllium Fluoride State within 5.0Å range:
probe atom residue distance (Å) B Occ
K:Mg1501

b:0.8
occ:1.00
 OE2 K:GLU598 2.0 0.2 1.0
OD2 K:ASP597 2.1 0.8 1.0
OD1 K:ASP597 2.2 0.8 1.0
F2 K:BEF1503 2.3 1.0 1.0
CG K:ASP597 2.4 0.8 1.0
CD K:GLU598 3.0 0.2 1.0
CG K:GLU598 3.5 0.2 1.0
BE K:BEF1503 3.7 1.0 1.0
CB K:ASP597 3.9 0.8 1.0
F3 K:BEF1503 4.0 1.0 1.0
OE1 K:GLU598 4.0 0.2 1.0
N K:GLU598 4.1 0.2 1.0
O1B K:ADP1502 4.6 1.0 1.0
NE1 K:TRP534 4.7 0.0 1.0
CB K:GLU598 4.7 0.2 1.0
CA K:GLU598 4.7 0.2 1.0
CA K:ASP597 4.7 0.8 1.0
C K:ASP597 4.8 0.8 1.0

Reference:

R.W.Baker, J.M.Reimer, P.J.Carman, B.Turegun, T.Arakawa, R.Dominguez, A.E.Leschziner. Structural Insights Into Assembly and Function of the Rsc Chromatin Remodeling Complex Nat.Struct.Mol.Biol. 2020.
ISSN: ESSN 1545-9985
DOI: 10.1038/S41594-020-00528-8
Page generated: Tue Dec 15 01:28:11 2020

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