Magnesium in PDB 6vzu: TTLL6 Bound to Alpha-Elongation Analog
Protein crystallography data
The structure of TTLL6 Bound to Alpha-Elongation Analog, PDB code: 6vzu
was solved by
K.K.Mahalingan,
E.K.Keenen,
M.Strickland,
Y.Li,
Y.Liu,
H.B.Ball,
M.E.Tanner,
N.Tjandra,
A.Roll-Mecak,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
|
Resolution Low / High (Å)
|
46.63 /
1.98
|
|
Space group
|
P 1 21 1
|
|
Cell size a, b, c (Å), α, β, γ (°)
|
75.263,
110.631,
173.370,
90.00,
90.24,
90.00
|
|
R / Rfree (%)
|
17.4 /
19.3
|
Other elements in 6vzu:
The structure of TTLL6 Bound to Alpha-Elongation Analog also contains other interesting chemical elements:
Magnesium Binding Sites:
The binding sites of Magnesium atom in the TTLL6 Bound to Alpha-Elongation Analog
(pdb code 6vzu). This binding sites where shown within
5.0 Angstroms radius around Magnesium atom.
In total 8 binding sites of Magnesium where determined in the
TTLL6 Bound to Alpha-Elongation Analog, PDB code: 6vzu:
Jump to Magnesium binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
Magnesium binding site 1 out
of 8 in 6vzu
Go back to
Magnesium Binding Sites List in 6vzu
Magnesium binding site 1 out
of 8 in the TTLL6 Bound to Alpha-Elongation Analog
 Mono view
 Stereo pair view
|
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 1 of TTLL6 Bound to Alpha-Elongation Analog within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg607
b:22.5
occ:1.00
|
O
|
A:HOH761
|
2.0
|
26.2
|
1.0
|
|
O1A
|
A:ADP606
|
2.0
|
24.9
|
1.0
|
|
OD2
|
A:ASP346
|
2.0
|
32.7
|
1.0
|
|
OE2
|
A:GLU359
|
2.0
|
29.6
|
1.0
|
|
O1B
|
A:ADP606
|
2.1
|
26.1
|
1.0
|
|
O25
|
A:RZP605
|
2.1
|
23.9
|
1.0
|
|
CD
|
A:GLU359
|
3.1
|
30.5
|
1.0
|
|
PB
|
A:ADP606
|
3.2
|
26.8
|
1.0
|
|
PA
|
A:ADP606
|
3.2
|
28.7
|
1.0
|
|
CG
|
A:ASP346
|
3.3
|
31.9
|
1.0
|
|
P24
|
A:RZP605
|
3.3
|
26.7
|
1.0
|
|
O3A
|
A:ADP606
|
3.5
|
25.6
|
1.0
|
|
MG
|
A:MG608
|
3.6
|
25.7
|
1.0
|
|
O26
|
A:RZP605
|
3.6
|
27.5
|
1.0
|
|
O2B
|
A:ADP606
|
3.7
|
24.5
|
1.0
|
|
CG
|
A:GLU359
|
3.7
|
25.8
|
1.0
|
|
ND2
|
A:ASN264
|
3.8
|
30.4
|
1.0
|
|
OD1
|
A:ASP346
|
4.0
|
31.6
|
1.0
|
|
O27
|
A:RZP605
|
4.0
|
25.5
|
1.0
|
|
NH1
|
A:ARG241
|
4.0
|
36.6
|
1.0
|
|
C5'
|
A:ADP606
|
4.0
|
26.5
|
1.0
|
|
OE1
|
A:GLU359
|
4.1
|
26.3
|
1.0
|
|
O5'
|
A:ADP606
|
4.1
|
23.8
|
1.0
|
|
NH2
|
A:ARG241
|
4.1
|
26.2
|
1.0
|
|
ND2
|
A:ASN361
|
4.2
|
27.0
|
1.0
|
|
O3'
|
A:ADP606
|
4.2
|
29.5
|
1.0
|
|
CB
|
A:ASP346
|
4.3
|
25.8
|
1.0
|
|
NH2
|
A:ARG219
|
4.4
|
32.4
|
1.0
|
|
O2A
|
A:ADP606
|
4.4
|
28.7
|
1.0
|
|
O7
|
A:RZP605
|
4.4
|
25.5
|
1.0
|
|
O3B
|
A:ADP606
|
4.5
|
27.6
|
1.0
|
|
CZ
|
A:ARG241
|
4.6
|
37.7
|
1.0
|
|
C3'
|
A:ADP606
|
4.6
|
31.9
|
1.0
|
|
OD1
|
A:ASN361
|
4.8
|
27.8
|
1.0
|
|
CG
|
A:ASN264
|
4.8
|
30.8
|
1.0
|
|
C4'
|
A:ADP606
|
4.9
|
28.1
|
1.0
|
|
CG
|
A:ASN361
|
4.9
|
28.1
|
1.0
|
|
Magnesium binding site 2 out
of 8 in 6vzu
Go back to
Magnesium Binding Sites List in 6vzu
Magnesium binding site 2 out
of 8 in the TTLL6 Bound to Alpha-Elongation Analog
 Mono view
 Stereo pair view
|
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 2 of TTLL6 Bound to Alpha-Elongation Analog within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg608
b:25.7
occ:1.00
|
O26
|
A:RZP605
|
2.0
|
27.5
|
1.0
|
|
O
|
A:HOH746
|
2.0
|
27.3
|
1.0
|
|
O2B
|
A:ADP606
|
2.1
|
24.5
|
1.0
|
|
OD1
|
A:ASN361
|
2.1
|
27.8
|
1.0
|
|
OE2
|
A:GLU359
|
2.2
|
29.6
|
1.0
|
|
OE1
|
A:GLU359
|
2.2
|
26.3
|
1.0
|
|
CD
|
A:GLU359
|
2.5
|
30.5
|
1.0
|
|
CG
|
A:ASN361
|
3.1
|
28.1
|
1.0
|
|
PB
|
A:ADP606
|
3.2
|
26.8
|
1.0
|
|
P24
|
A:RZP605
|
3.2
|
26.7
|
1.0
|
|
O1B
|
A:ADP606
|
3.4
|
26.1
|
1.0
|
|
ND2
|
A:ASN361
|
3.5
|
27.0
|
1.0
|
|
O25
|
A:RZP605
|
3.5
|
23.9
|
1.0
|
|
MG
|
A:MG607
|
3.6
|
22.5
|
1.0
|
|
NZ
|
A:LYS125
|
3.8
|
27.0
|
1.0
|
|
CG
|
A:GLU359
|
4.0
|
25.8
|
1.0
|
|
CA
|
A:CYS179
|
4.1
|
24.1
|
1.0
|
|
O7
|
A:RZP605
|
4.1
|
25.5
|
1.0
|
|
CB
|
A:CYS179
|
4.1
|
24.9
|
1.0
|
|
O3A
|
A:ADP606
|
4.2
|
25.6
|
1.0
|
|
O
|
A:HOH795
|
4.2
|
37.8
|
1.0
|
|
O
|
A:GLY178
|
4.2
|
28.3
|
1.0
|
|
C9
|
A:RZP605
|
4.2
|
30.4
|
1.0
|
|
O13
|
A:RZP605
|
4.2
|
32.5
|
1.0
|
|
O27
|
A:RZP605
|
4.3
|
25.5
|
1.0
|
|
O3B
|
A:ADP606
|
4.3
|
27.6
|
1.0
|
|
CB
|
A:ASN361
|
4.5
|
30.3
|
1.0
|
|
C11
|
A:RZP605
|
4.6
|
37.8
|
1.0
|
|
CE
|
A:LYS125
|
4.6
|
31.7
|
1.0
|
|
C10
|
A:RZP605
|
4.6
|
25.5
|
1.0
|
|
O1A
|
A:ADP606
|
4.6
|
24.9
|
1.0
|
|
N
|
A:GLN180
|
4.7
|
27.8
|
1.0
|
|
OD2
|
A:ASP346
|
4.8
|
32.7
|
1.0
|
|
CB
|
A:GLU359
|
4.9
|
26.7
|
1.0
|
|
C
|
A:CYS179
|
4.9
|
25.9
|
1.0
|
|
PA
|
A:ADP606
|
4.9
|
28.7
|
1.0
|
|
O
|
A:HOH903
|
5.0
|
43.2
|
1.0
|
|
Magnesium binding site 3 out
of 8 in 6vzu
Go back to
Magnesium Binding Sites List in 6vzu
Magnesium binding site 3 out
of 8 in the TTLL6 Bound to Alpha-Elongation Analog
 Mono view
 Stereo pair view
|
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 3 of TTLL6 Bound to Alpha-Elongation Analog within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Mg607
b:25.6
occ:1.00
|
O2A
|
B:ADP606
|
2.0
|
24.5
|
1.0
|
|
O2B
|
B:ADP606
|
2.0
|
23.3
|
1.0
|
|
O
|
B:HOH754
|
2.0
|
25.2
|
1.0
|
|
OD2
|
B:ASP346
|
2.0
|
32.5
|
1.0
|
|
O25
|
B:RZP605
|
2.1
|
22.8
|
1.0
|
|
OE2
|
B:GLU359
|
2.2
|
26.5
|
1.0
|
|
CD
|
B:GLU359
|
3.2
|
31.4
|
1.0
|
|
PB
|
B:ADP606
|
3.2
|
24.4
|
1.0
|
|
PA
|
B:ADP606
|
3.2
|
27.7
|
1.0
|
|
CG
|
B:ASP346
|
3.2
|
30.8
|
1.0
|
|
P24
|
B:RZP605
|
3.3
|
25.9
|
1.0
|
|
O3A
|
B:ADP606
|
3.5
|
25.9
|
1.0
|
|
MG
|
B:MG608
|
3.6
|
26.4
|
1.0
|
|
O1B
|
B:ADP606
|
3.7
|
22.9
|
1.0
|
|
CG
|
B:GLU359
|
3.7
|
27.9
|
1.0
|
|
O26
|
B:RZP605
|
3.7
|
24.6
|
1.0
|
|
ND2
|
B:ASN264
|
3.9
|
25.1
|
1.0
|
|
OD1
|
B:ASP346
|
4.0
|
31.9
|
1.0
|
|
C5'
|
B:ADP606
|
4.0
|
23.4
|
1.0
|
|
NH2
|
B:ARG241
|
4.0
|
39.6
|
1.0
|
|
O27
|
B:RZP605
|
4.1
|
25.4
|
1.0
|
|
O5'
|
B:ADP606
|
4.1
|
24.9
|
1.0
|
|
NH1
|
B:ARG241
|
4.1
|
27.0
|
1.0
|
|
OE1
|
B:GLU359
|
4.2
|
27.6
|
1.0
|
|
O3'
|
B:ADP606
|
4.2
|
26.6
|
1.0
|
|
ND2
|
B:ASN361
|
4.2
|
23.6
|
1.0
|
|
CB
|
B:ASP346
|
4.2
|
26.4
|
1.0
|
|
O7
|
B:RZP605
|
4.4
|
24.6
|
1.0
|
|
O1A
|
B:ADP606
|
4.4
|
27.3
|
1.0
|
|
NH2
|
B:ARG219
|
4.5
|
27.1
|
1.0
|
|
O3B
|
B:ADP606
|
4.5
|
26.4
|
1.0
|
|
CZ
|
B:ARG241
|
4.5
|
36.3
|
1.0
|
|
C3'
|
B:ADP606
|
4.6
|
28.8
|
1.0
|
|
CG
|
B:ASN264
|
4.8
|
28.6
|
1.0
|
|
OD1
|
B:ASN361
|
4.8
|
26.7
|
1.0
|
|
C4'
|
B:ADP606
|
4.8
|
27.1
|
1.0
|
|
CG
|
B:ASN361
|
5.0
|
27.6
|
1.0
|
|
OD1
|
B:ASN264
|
5.0
|
28.1
|
1.0
|
|
Magnesium binding site 4 out
of 8 in 6vzu
Go back to
Magnesium Binding Sites List in 6vzu
Magnesium binding site 4 out
of 8 in the TTLL6 Bound to Alpha-Elongation Analog
 Mono view
 Stereo pair view
|
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 4 of TTLL6 Bound to Alpha-Elongation Analog within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Mg608
b:26.4
occ:1.00
|
O26
|
B:RZP605
|
2.0
|
24.6
|
1.0
|
|
O
|
B:HOH732
|
2.0
|
25.8
|
1.0
|
|
O1B
|
B:ADP606
|
2.0
|
22.9
|
1.0
|
|
OE2
|
B:GLU359
|
2.1
|
26.5
|
1.0
|
|
OD1
|
B:ASN361
|
2.1
|
26.7
|
1.0
|
|
OE1
|
B:GLU359
|
2.3
|
27.6
|
1.0
|
|
CD
|
B:GLU359
|
2.5
|
31.4
|
1.0
|
|
CG
|
B:ASN361
|
3.1
|
27.6
|
1.0
|
|
P24
|
B:RZP605
|
3.2
|
25.9
|
1.0
|
|
PB
|
B:ADP606
|
3.2
|
24.4
|
1.0
|
|
O2B
|
B:ADP606
|
3.4
|
23.3
|
1.0
|
|
O25
|
B:RZP605
|
3.5
|
22.8
|
1.0
|
|
ND2
|
B:ASN361
|
3.5
|
23.6
|
1.0
|
|
MG
|
B:MG607
|
3.6
|
25.6
|
1.0
|
|
NZ
|
B:LYS125
|
3.8
|
28.3
|
1.0
|
|
CG
|
B:GLU359
|
4.0
|
27.9
|
1.0
|
|
CA
|
B:CYS179
|
4.0
|
25.5
|
1.0
|
|
O7
|
B:RZP605
|
4.1
|
24.6
|
1.0
|
|
CB
|
B:CYS179
|
4.1
|
22.7
|
1.0
|
|
O3A
|
B:ADP606
|
4.1
|
25.9
|
1.0
|
|
O
|
B:HOH739
|
4.1
|
39.2
|
1.0
|
|
O
|
B:GLY178
|
4.2
|
25.8
|
1.0
|
|
C9
|
B:RZP605
|
4.2
|
24.9
|
1.0
|
|
O13
|
B:RZP605
|
4.2
|
30.4
|
1.0
|
|
O3B
|
B:ADP606
|
4.3
|
26.4
|
1.0
|
|
O27
|
B:RZP605
|
4.3
|
25.4
|
1.0
|
|
CB
|
B:ASN361
|
4.5
|
24.2
|
1.0
|
|
C11
|
B:RZP605
|
4.6
|
37.2
|
1.0
|
|
CE
|
B:LYS125
|
4.6
|
27.5
|
1.0
|
|
O2A
|
B:ADP606
|
4.6
|
24.5
|
1.0
|
|
C10
|
B:RZP605
|
4.6
|
24.3
|
1.0
|
|
N
|
B:GLN180
|
4.7
|
24.0
|
1.0
|
|
OD2
|
B:ASP346
|
4.9
|
32.5
|
1.0
|
|
C
|
B:CYS179
|
4.9
|
24.8
|
1.0
|
|
PA
|
B:ADP606
|
4.9
|
27.7
|
1.0
|
|
CB
|
B:GLU359
|
4.9
|
26.0
|
1.0
|
|
C5
|
B:RZP605
|
5.0
|
25.2
|
1.0
|
|
Magnesium binding site 5 out
of 8 in 6vzu
Go back to
Magnesium Binding Sites List in 6vzu
Magnesium binding site 5 out
of 8 in the TTLL6 Bound to Alpha-Elongation Analog
 Mono view
 Stereo pair view
|
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 5 of TTLL6 Bound to Alpha-Elongation Analog within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Mg702
b:26.2
occ:1.00
|
O26
|
C:RZP705
|
2.0
|
26.7
|
1.0
|
|
OE1
|
C:GLU359
|
2.0
|
25.5
|
1.0
|
|
O
|
C:HOH841
|
2.0
|
25.8
|
1.0
|
|
O2B
|
C:ADP706
|
2.1
|
23.8
|
1.0
|
|
OD1
|
C:ASN361
|
2.1
|
27.2
|
1.0
|
|
OE2
|
C:GLU359
|
2.3
|
26.1
|
1.0
|
|
CD
|
C:GLU359
|
2.5
|
28.4
|
1.0
|
|
CG
|
C:ASN361
|
3.1
|
28.6
|
1.0
|
|
P24
|
C:RZP705
|
3.2
|
25.6
|
1.0
|
|
PB
|
C:ADP706
|
3.2
|
24.5
|
1.0
|
|
O1B
|
C:ADP706
|
3.4
|
27.0
|
1.0
|
|
O25
|
C:RZP705
|
3.5
|
22.4
|
1.0
|
|
ND2
|
C:ASN361
|
3.6
|
25.3
|
1.0
|
|
MG
|
C:MG703
|
3.6
|
24.8
|
1.0
|
|
NZ
|
C:LYS125
|
3.9
|
30.1
|
1.0
|
|
CG
|
C:GLU359
|
4.0
|
28.5
|
1.0
|
|
O7
|
C:RZP705
|
4.0
|
24.7
|
1.0
|
|
CA
|
C:CYS179
|
4.0
|
28.5
|
1.0
|
|
CB
|
C:CYS179
|
4.1
|
28.9
|
1.0
|
|
C9
|
C:RZP705
|
4.1
|
23.4
|
1.0
|
|
O3A
|
C:ADP706
|
4.2
|
26.0
|
1.0
|
|
O
|
C:HOH819
|
4.2
|
36.6
|
1.0
|
|
O
|
C:GLY178
|
4.2
|
27.6
|
1.0
|
|
O13
|
C:RZP705
|
4.3
|
31.0
|
1.0
|
|
O3B
|
C:ADP706
|
4.3
|
27.3
|
1.0
|
|
O27
|
C:RZP705
|
4.3
|
25.3
|
1.0
|
|
CB
|
C:ASN361
|
4.5
|
26.6
|
1.0
|
|
O1A
|
C:ADP706
|
4.5
|
24.3
|
1.0
|
|
C11
|
C:RZP705
|
4.6
|
37.6
|
1.0
|
|
C10
|
C:RZP705
|
4.6
|
26.4
|
1.0
|
|
CE
|
C:LYS125
|
4.6
|
29.4
|
1.0
|
|
N
|
C:GLN180
|
4.7
|
28.9
|
1.0
|
|
OD2
|
C:ASP346
|
4.8
|
35.6
|
1.0
|
|
C
|
C:CYS179
|
4.9
|
29.4
|
1.0
|
|
C5
|
C:RZP705
|
4.9
|
28.0
|
1.0
|
|
PA
|
C:ADP706
|
4.9
|
24.8
|
1.0
|
|
CB
|
C:GLU359
|
4.9
|
25.3
|
1.0
|
|
Magnesium binding site 6 out
of 8 in 6vzu
Go back to
Magnesium Binding Sites List in 6vzu
Magnesium binding site 6 out
of 8 in the TTLL6 Bound to Alpha-Elongation Analog
 Mono view
 Stereo pair view
|
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 6 of TTLL6 Bound to Alpha-Elongation Analog within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Mg703
b:24.8
occ:1.00
|
O1A
|
C:ADP706
|
2.0
|
24.3
|
1.0
|
|
O1B
|
C:ADP706
|
2.0
|
27.0
|
1.0
|
|
O25
|
C:RZP705
|
2.0
|
22.4
|
1.0
|
|
OD2
|
C:ASP346
|
2.1
|
35.6
|
1.0
|
|
O
|
C:HOH842
|
2.1
|
24.9
|
1.0
|
|
OE1
|
C:GLU359
|
2.1
|
25.5
|
1.0
|
|
PB
|
C:ADP706
|
3.2
|
24.5
|
1.0
|
|
CD
|
C:GLU359
|
3.2
|
28.4
|
1.0
|
|
P24
|
C:RZP705
|
3.2
|
25.6
|
1.0
|
|
PA
|
C:ADP706
|
3.2
|
24.8
|
1.0
|
|
CG
|
C:ASP346
|
3.3
|
34.3
|
1.0
|
|
O3A
|
C:ADP706
|
3.5
|
26.0
|
1.0
|
|
MG
|
C:MG702
|
3.6
|
26.2
|
1.0
|
|
O2B
|
C:ADP706
|
3.6
|
23.8
|
1.0
|
|
O26
|
C:RZP705
|
3.6
|
26.7
|
1.0
|
|
CG
|
C:GLU359
|
3.7
|
28.5
|
1.0
|
|
ND2
|
C:ASN264
|
3.8
|
26.7
|
1.0
|
|
NH2
|
C:ARG241
|
4.0
|
33.5
|
1.0
|
|
C5'
|
C:ADP706
|
4.0
|
24.4
|
1.0
|
|
OD1
|
C:ASP346
|
4.0
|
35.1
|
1.0
|
|
O27
|
C:RZP705
|
4.0
|
25.3
|
1.0
|
|
O5'
|
C:ADP706
|
4.1
|
25.2
|
1.0
|
|
NH1
|
C:ARG241
|
4.2
|
24.5
|
1.0
|
|
OE2
|
C:GLU359
|
4.2
|
26.1
|
1.0
|
|
O3'
|
C:ADP706
|
4.2
|
25.5
|
1.0
|
|
ND2
|
C:ASN361
|
4.3
|
25.3
|
1.0
|
|
CB
|
C:ASP346
|
4.3
|
26.6
|
1.0
|
|
O7
|
C:RZP705
|
4.4
|
24.7
|
1.0
|
|
NH2
|
C:ARG219
|
4.4
|
26.7
|
1.0
|
|
O2A
|
C:ADP706
|
4.4
|
26.1
|
1.0
|
|
O3B
|
C:ADP706
|
4.5
|
27.3
|
1.0
|
|
CZ
|
C:ARG241
|
4.6
|
33.0
|
1.0
|
|
C3'
|
C:ADP706
|
4.6
|
29.8
|
1.0
|
|
OD1
|
C:ASN361
|
4.7
|
27.2
|
1.0
|
|
CG
|
C:ASN264
|
4.7
|
31.0
|
1.0
|
|
C4'
|
C:ADP706
|
4.8
|
26.7
|
1.0
|
|
CG
|
C:ASN361
|
5.0
|
28.6
|
1.0
|
|
OD1
|
C:ASN264
|
5.0
|
31.0
|
1.0
|
|
Magnesium binding site 7 out
of 8 in 6vzu
Go back to
Magnesium Binding Sites List in 6vzu
Magnesium binding site 7 out
of 8 in the TTLL6 Bound to Alpha-Elongation Analog
 Mono view
 Stereo pair view
|
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 7 of TTLL6 Bound to Alpha-Elongation Analog within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Mg610
b:23.6
occ:1.00
|
OE1
|
D:GLU359
|
2.0
|
29.8
|
1.0
|
|
O2A
|
D:ADP609
|
2.0
|
24.1
|
1.0
|
|
O2B
|
D:ADP609
|
2.0
|
23.4
|
1.0
|
|
O
|
D:HOH749
|
2.1
|
29.4
|
1.0
|
|
OD2
|
D:ASP346
|
2.1
|
34.7
|
1.0
|
|
O25
|
D:RZP608
|
2.1
|
23.5
|
1.0
|
|
CD
|
D:GLU359
|
3.0
|
30.6
|
1.0
|
|
PB
|
D:ADP609
|
3.2
|
26.1
|
1.0
|
|
PA
|
D:ADP609
|
3.2
|
28.1
|
1.0
|
|
CG
|
D:ASP346
|
3.3
|
36.6
|
1.0
|
|
P24
|
D:RZP608
|
3.3
|
27.3
|
1.0
|
|
O3A
|
D:ADP609
|
3.5
|
26.4
|
1.0
|
|
MG
|
D:MG611
|
3.5
|
26.6
|
1.0
|
|
O1B
|
D:ADP609
|
3.6
|
23.1
|
1.0
|
|
O26
|
D:RZP608
|
3.6
|
27.9
|
1.0
|
|
CG
|
D:GLU359
|
3.7
|
27.9
|
1.0
|
|
ND2
|
D:ASN264
|
3.8
|
27.9
|
1.0
|
|
C5'
|
D:ADP609
|
4.0
|
26.3
|
1.0
|
|
OD1
|
D:ASP346
|
4.0
|
31.5
|
1.0
|
|
O27
|
D:RZP608
|
4.0
|
24.4
|
1.0
|
|
OE2
|
D:GLU359
|
4.0
|
27.1
|
1.0
|
|
NH2
|
D:ARG241
|
4.1
|
34.7
|
1.0
|
|
O5'
|
D:ADP609
|
4.1
|
24.9
|
1.0
|
|
NH1
|
D:ARG241
|
4.2
|
25.2
|
1.0
|
|
ND2
|
D:ASN361
|
4.2
|
28.8
|
1.0
|
|
O3'
|
D:ADP609
|
4.2
|
28.0
|
1.0
|
|
CB
|
D:ASP346
|
4.3
|
27.1
|
1.0
|
|
O1A
|
D:ADP609
|
4.4
|
27.3
|
1.0
|
|
O7
|
D:RZP608
|
4.4
|
27.4
|
1.0
|
|
NH2
|
D:ARG219
|
4.4
|
30.1
|
1.0
|
|
O3B
|
D:ADP609
|
4.5
|
27.1
|
1.0
|
|
CZ
|
D:ARG241
|
4.6
|
38.3
|
1.0
|
|
C3'
|
D:ADP609
|
4.6
|
32.6
|
1.0
|
|
OD1
|
D:ASN361
|
4.8
|
25.8
|
1.0
|
|
CG
|
D:ASN264
|
4.8
|
29.7
|
1.0
|
|
C4'
|
D:ADP609
|
4.9
|
27.0
|
1.0
|
|
CG
|
D:ASN361
|
4.9
|
27.6
|
1.0
|
|
Magnesium binding site 8 out
of 8 in 6vzu
Go back to
Magnesium Binding Sites List in 6vzu
Magnesium binding site 8 out
of 8 in the TTLL6 Bound to Alpha-Elongation Analog
 Mono view
 Stereo pair view
|
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 8 of TTLL6 Bound to Alpha-Elongation Analog within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Mg611
b:26.6
occ:1.00
|
O26
|
D:RZP608
|
2.0
|
27.9
|
1.0
|
|
O
|
D:HOH742
|
2.0
|
27.1
|
1.0
|
|
O1B
|
D:ADP609
|
2.1
|
23.1
|
1.0
|
|
OD1
|
D:ASN361
|
2.1
|
25.8
|
1.0
|
|
OE1
|
D:GLU359
|
2.2
|
29.8
|
1.0
|
|
OE2
|
D:GLU359
|
2.2
|
27.1
|
1.0
|
|
CD
|
D:GLU359
|
2.5
|
30.6
|
1.0
|
|
CG
|
D:ASN361
|
3.1
|
27.6
|
1.0
|
|
P24
|
D:RZP608
|
3.2
|
27.3
|
1.0
|
|
PB
|
D:ADP609
|
3.2
|
26.1
|
1.0
|
|
O2B
|
D:ADP609
|
3.4
|
23.4
|
1.0
|
|
ND2
|
D:ASN361
|
3.5
|
28.8
|
1.0
|
|
O25
|
D:RZP608
|
3.5
|
23.5
|
1.0
|
|
MG
|
D:MG610
|
3.5
|
23.6
|
1.0
|
|
NZ
|
D:LYS125
|
3.9
|
29.6
|
1.0
|
|
CG
|
D:GLU359
|
4.0
|
27.9
|
1.0
|
|
CA
|
D:CYS179
|
4.0
|
24.4
|
1.0
|
|
O7
|
D:RZP608
|
4.0
|
27.4
|
1.0
|
|
O3A
|
D:ADP609
|
4.1
|
26.4
|
1.0
|
|
CB
|
D:CYS179
|
4.1
|
26.5
|
1.0
|
|
O
|
D:HOH783
|
4.1
|
37.0
|
1.0
|
|
C9
|
D:RZP608
|
4.2
|
27.4
|
1.0
|
|
O
|
D:GLY178
|
4.2
|
28.6
|
1.0
|
|
O27
|
D:RZP608
|
4.3
|
24.4
|
1.0
|
|
O13
|
D:RZP608
|
4.3
|
35.2
|
1.0
|
|
O3B
|
D:ADP609
|
4.3
|
27.1
|
1.0
|
|
CB
|
D:ASN361
|
4.5
|
27.1
|
1.0
|
|
CE
|
D:LYS125
|
4.6
|
31.6
|
1.0
|
|
O2A
|
D:ADP609
|
4.6
|
24.1
|
1.0
|
|
C11
|
D:RZP608
|
4.6
|
35.0
|
1.0
|
|
C10
|
D:RZP608
|
4.6
|
24.8
|
1.0
|
|
N
|
D:GLN180
|
4.7
|
24.6
|
1.0
|
|
OD2
|
D:ASP346
|
4.8
|
34.7
|
1.0
|
|
CB
|
D:GLU359
|
4.9
|
26.6
|
1.0
|
|
PA
|
D:ADP609
|
4.9
|
28.1
|
1.0
|
|
C
|
D:CYS179
|
4.9
|
25.5
|
1.0
|
|
Reference:
K.K.Mahalingan,
E.K.Keenen,
M.Strickland,
Y.Li,
Y.Liu,
H.B.Ball,
M.E.Tanner,
N.Tjandra,
A.Roll-Mecak.
TTLL6 Bound to Alpha-Elongation Analog To Be Published.
Page generated: Tue Oct 1 22:49:58 2024
|
