Magnesium in PDB 6wge: Cryo-Em Structure of Human Cohesin-Nipbl-Dna Complex Without STAG1

The binding sites of Magnesium atom in the Cryo-Em Structure of Human Cohesin-Nipbl-Dna Complex Without STAG1 (pdb code 6wge). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Cryo-Em Structure of Human Cohesin-Nipbl-Dna Complex Without STAG1, PDB code: 6wge:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Cryo-Em Structure of Human Cohesin-Nipbl-Dna Complex Without STAG1


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Cryo-Em Structure of Human Cohesin-Nipbl-Dna Complex Without STAG1 within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg2001 b:50.0 occ:1.00 NE2 A:GLN137 2.2 47.9 1.0 OE1 A:GLN137 2.2 47.9 1.0 O1G A:ANP2000 2.5 53.3 1.0 CD A:GLN137 2.5 47.9 1.0 O2B A:ANP2000 3.0 53.3 1.0 CB A:SER39 3.6 45.5 1.0 OG A:SER39 3.6 45.5 1.0 CG A:GLN137 3.9 47.9 1.0 PG A:ANP2000 3.9 53.3 1.0 OE1 A:GLN1157 4.1 44.0 1.0 PB A:ANP2000 4.3 53.3 1.0 N B:GLY1117 4.4 48.9 1.0 N3B A:ANP2000 4.6 53.3 1.0 O2G A:ANP2000 4.6 53.3 1.0 OD2 A:ASP1156 4.7 41.3 1.0 OD1 A:ASP1156 4.7 41.3 1.0 O3G A:ANP2000 4.8 53.3 1.0 CD A:GLN1157 4.8 44.0 1.0 O1B A:ANP2000 4.8 53.3 1.0 CB A:GLN137 4.9 47.9 1.0 CA A:SER39 5.0 45.5 1.0

Magnesium binding site 2 out of 2 in the Cryo-Em Structure of Human Cohesin-Nipbl-Dna Complex Without STAG1


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Cryo-Em Structure of Human Cohesin-Nipbl-Dna Complex Without STAG1 within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg2001 b:46.2 occ:1.00 NE2 B:GLN141 1.9 39.1 1.0 O3G B:ANP2000 1.9 66.0 1.0 OE1 B:GLN141 2.1 39.1 1.0 CD B:GLN141 2.3 39.1 1.0 O2B B:ANP2000 2.3 66.0 1.0 O1G B:ANP2000 2.4 66.0 1.0 PG B:ANP2000 2.6 66.0 1.0 PB B:ANP2000 3.3 66.0 1.0 N3B B:ANP2000 3.4 66.0 1.0 OG B:SER39 3.4 35.7 1.0 CG B:GLN141 3.7 39.1 1.0 O2G B:ANP2000 3.9 66.0 1.0 OG A:SER1129 4.0 43.2 1.0 O1B B:ANP2000 4.0 66.0 1.0 CB B:SER39 4.4 35.7 1.0 CB B:GLN141 4.4 39.1 1.0 OD2 B:ASP1143 4.7 40.9 1.0 O3A B:ANP2000 4.7 66.0 1.0 N A:GLY1130 4.8 36.4 1.0 O2A B:ANP2000 4.8 66.0 1.0 OD1 B:ASP1143 4.9 40.9 1.0

Z.B.Shi, H.Gao, X.C.Bai, H.Yu. Cryo-Em Structure of Human Cohesin-Nipbl-Dna Complex Science 2020.
ISSN: ESSN 1095-9203
DOI: 10.1126/SCIENCE.ABB0981