Magnesium in PDB 6wsh: Crystal Structure of Eutv From Enterococcus Faecalis

The structure of Crystal Structure of Eutv From Enterococcus Faecalis, PDB code: 6wsh was solved by S.F.Ataide, J.L.Walshe, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	42.84 / 2.12
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	54.539, 85.688, 97.456, 90, 90, 90
R / Rfree (%)	23.9 / 24.1

The structure of Crystal Structure of Eutv From Enterococcus Faecalis also contains other interesting chemical elements:

Sodium

(Na)

11 atoms

The binding sites of Magnesium atom in the Crystal Structure of Eutv From Enterococcus Faecalis (pdb code 6wsh). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Crystal Structure of Eutv From Enterococcus Faecalis, PDB code: 6wsh:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Crystal Structure of Eutv From Enterococcus Faecalis


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Eutv From Enterococcus Faecalis within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg201 b:30.7 occ:1.00 H2 A:HOH306 2.1 38.5 1.0 OD2 A:ASP10 2.1 44.5 1.0 O A:GLN56 2.2 29.1 1.0 OD2 A:ASP54 2.3 45.4 1.0 O A:HOH306 2.4 38.5 1.0 H1 A:HOH306 2.8 38.5 1.0 CG A:ASP10 3.1 38.0 1.0 CG A:ASP54 3.1 31.0 1.0 C A:GLN56 3.4 32.4 1.0 OD1 A:ASP10 3.5 54.8 1.0 HB2 A:GLN56 3.5 39.8 1.0 H A:ASP10 3.6 29.9 1.0 HG2 A:MET57 3.8 29.2 1.0 HB3 A:GLN56 3.8 39.8 1.0 HB3 A:ASP54 3.8 32.1 1.0 OD1 A:ASP54 3.8 30.6 1.0 HZ1 A:LYS104 3.9 44.1 1.0 OD1 A:ASP9 3.9 36.8 1.0 HA A:MET57 3.9 32.9 1.0 CB A:GLN56 4.0 33.2 1.0 CB A:ASP54 4.0 26.7 1.0 CA A:GLN56 4.2 20.7 1.0 HG3 A:MET57 4.2 29.2 1.0 HB2 A:ASP54 4.3 32.1 1.0 N A:MET57 4.4 19.3 1.0 CB A:ASP10 4.4 27.2 1.0 H A:GLN56 4.4 32.7 1.0 CG A:MET57 4.4 24.3 1.0 HZ3 A:LYS104 4.5 44.1 1.0 N A:ASP10 4.5 25.0 1.0 NZ A:LYS104 4.5 36.8 1.0 HZ2 A:LYS104 4.5 44.1 1.0 HB3 A:ASP10 4.6 32.7 1.0 N A:GLN56 4.6 27.2 1.0 CA A:MET57 4.6 27.4 1.0 HG3 A:GLU11 4.6 44.9 1.0 H A:GLU11 4.6 37.0 1.0 CG A:ASP9 4.7 35.9 1.0 HA A:ASP9 4.8 32.8 1.0

Magnesium binding site 2 out of 2 in the Crystal Structure of Eutv From Enterococcus Faecalis


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Crystal Structure of Eutv From Enterococcus Faecalis within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg202 b:35.9 occ:1.00 OD2 B:ASP10 2.2 42.7 1.0 O B:HOH344 2.5 30.7 1.0 H1 B:HOH344 2.5 30.7 1.0 O B:GLN56 2.6 33.5 1.0 OD2 B:ASP54 2.9 28.9 1.0 H2 B:HOH344 3.0 30.7 1.0 CG B:ASP10 3.1 30.1 1.0 OD1 B:ASP10 3.4 25.4 1.0 CG B:ASP54 3.6 27.1 1.0 C B:GLN56 3.7 21.0 1.0 H1 B:HOH319 3.7 29.6 1.0 HB3 B:GLN56 3.8 26.8 1.0 HZ2 B:LYS104 3.9 41.1 1.0 HA B:MET57 3.9 22.0 1.0 HB3 B:ASP54 4.0 18.2 1.0 HG2 B:MET57 4.0 23.5 1.0 H2 B:HOH319 4.0 29.6 1.0 H B:ASP10 4.0 18.2 1.0 OD1 B:ASP9 4.3 34.5 1.0 O B:HOH319 4.3 29.6 1.0 CB B:ASP54 4.3 15.2 1.0 OD1 B:ASP54 4.3 16.4 1.0 HB2 B:ASP54 4.4 18.2 1.0 CB B:GLN56 4.5 22.3 1.0 HB2 B:GLN56 4.5 26.8 1.0 CB B:ASP10 4.5 15.3 1.0 HG3 B:MET57 4.5 23.5 1.0 HG3 B:GLU11 4.6 39.2 1.0 N B:MET57 4.6 26.4 1.0 HB3 B:ASP10 4.6 18.4 1.0 H B:GLN56 4.6 21.7 1.0 CA B:GLN56 4.6 19.9 1.0 CA B:MET57 4.6 18.3 1.0 HD3 B:PRO58 4.7 35.7 1.0 CG B:MET57 4.7 19.6 1.0 NZ B:LYS104 4.7 34.3 1.0 HZ3 B:LYS104 4.8 41.1 1.0 N B:ASP10 4.8 15.2 1.0 OE2 B:GLU11 4.9 53.5 1.0 H B:GLU11 5.0 19.7 1.0 HZ1 B:LYS104 5.0 41.1 1.0

S.F.Ataide, J.L.Walshe. Structural Characterisation of the E. Faecalis Anti-Terminator Protein Eutv Bound to Rna To Be Published.