Magnesium in PDB 6wvk: Cryo-Em Structure of Bacillus Subtilis Rna Polymerase in Complex with Held

All present enzymatic activity of Cryo-Em Structure of Bacillus Subtilis Rna Polymerase in Complex with Held:
2.7.7.6; 3.6.4.12;

The structure of Cryo-Em Structure of Bacillus Subtilis Rna Polymerase in Complex with Held also contains other interesting chemical elements:

Zinc

(Zn)

2 atoms

The binding sites of Magnesium atom in the Cryo-Em Structure of Bacillus Subtilis Rna Polymerase in Complex with Held (pdb code 6wvk). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Cryo-Em Structure of Bacillus Subtilis Rna Polymerase in Complex with Held, PDB code: 6wvk:

Magnesium binding site 1 out of 1 in the Cryo-Em Structure of Bacillus Subtilis Rna Polymerase in Complex with Held


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Cryo-Em Structure of Bacillus Subtilis Rna Polymerase in Complex with Held within 5.0Å range: probe atom residue distance (Å) B Occ D:Mg2001 b:42.6 occ:1.00 OD1 D:ASP449 1.9 41.5 1.0 OD1 D:ASP451 2.0 41.5 1.0 OD1 D:ASP453 2.0 41.0 1.0 CG D:ASP453 2.7 41.0 1.0 OD2 D:ASP453 2.7 41.0 1.0 CG D:ASP449 3.0 41.5 1.0 CG D:ASP451 3.0 41.5 1.0 OD2 D:ASP449 3.5 41.5 1.0 OD2 D:ASP451 3.6 41.5 1.0 O D:ASP449 3.9 41.5 1.0 CB D:ASP453 4.2 41.0 1.0 CB D:ASP451 4.3 41.5 1.0 CB D:ASP449 4.3 41.5 1.0 N D:ASP449 4.3 41.5 1.0 C D:ASP449 4.4 41.5 1.0 N D:ASP453 4.4 41.0 1.0 N D:ASP451 4.5 41.5 1.0 CA D:ASP449 4.6 41.5 1.0 CA D:ASP451 4.6 41.5 1.0 C D:ASP451 4.6 41.5 1.0 O H:LYS52 4.6 44.0 1.0 CB H:ASN54 4.7 44.5 1.0 N D:GLY452 4.7 41.3 1.0 CA D:ASP453 4.8 41.0 1.0 CB H:LYS52 4.8 44.0 1.0 CG H:ASN54 4.9 44.5 1.0

T.P.Newing, A.J.Oakley, M.Miller, C.Dawson, S.Brown, J.Bouwer, G.Tolun, P.J.Lewis. Transcription Complex Recycling By the Atpase Motor Protein Held To Be Published.