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Magnesium in PDB 6wwk: KIF14[391-755] Dimer Two-Heads-Bound State - Adp-Alfx in Complex with A Microtubule

Other elements in 6wwk:

The structure of KIF14[391-755] Dimer Two-Heads-Bound State - Adp-Alfx in Complex with A Microtubule also contains other interesting chemical elements:

Aluminium (Al) 1 atom
Fluorine (F) 3 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the KIF14[391-755] Dimer Two-Heads-Bound State - Adp-Alfx in Complex with A Microtubule (pdb code 6wwk). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the KIF14[391-755] Dimer Two-Heads-Bound State - Adp-Alfx in Complex with A Microtubule, PDB code: 6wwk:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in 6wwk

Go back to Magnesium Binding Sites List in 6wwk
Magnesium binding site 1 out of 2 in the KIF14[391-755] Dimer Two-Heads-Bound State - Adp-Alfx in Complex with A Microtubule


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of KIF14[391-755] Dimer Two-Heads-Bound State - Adp-Alfx in Complex with A Microtubule within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg502

b:56.0
occ:1.00
O1G A:GTP501 2.0 64.4 1.0
O3G A:GTP501 2.3 64.4 1.0
O1B A:GTP501 2.6 64.4 1.0
PG A:GTP501 2.6 64.4 1.0
PB A:GTP501 3.4 64.4 1.0
OD2 A:ASP98 3.5 68.0 1.0
O3B A:GTP501 3.5 64.4 1.0
OE2 A:GLU71 3.6 68.4 1.0
OE1 A:GLN11 3.6 65.3 1.0
O3A A:GTP501 3.7 64.4 1.0
NZ B:LYS252 3.8 63.4 1.0
O2G A:GTP501 3.9 64.4 1.0
CB A:GLN11 4.2 65.3 1.0
OD1 A:ASP98 4.2 68.0 1.0
CG A:ASP98 4.2 68.0 1.0
CD A:GLU71 4.5 68.4 1.0
CD A:GLN11 4.5 65.3 1.0
PA A:GTP501 4.7 64.4 1.0
O1A A:GTP501 4.7 64.4 1.0
N A:GLN11 4.8 65.3 1.0
O2B A:GTP501 4.8 64.4 1.0
CB B:ASN247 4.9 64.0 1.0
CE B:LYS252 4.9 63.4 1.0
CG A:GLN11 5.0 65.3 1.0

Magnesium binding site 2 out of 2 in 6wwk

Go back to Magnesium Binding Sites List in 6wwk
Magnesium binding site 2 out of 2 in the KIF14[391-755] Dimer Two-Heads-Bound State - Adp-Alfx in Complex with A Microtubule


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of KIF14[391-755] Dimer Two-Heads-Bound State - Adp-Alfx in Complex with A Microtubule within 5.0Å range:
probe atom residue distance (Å) B Occ
E:Mg502

b:57.1
occ:1.00
O1G E:GTP501 2.0 61.7 1.0
OE2 E:GLU71 2.3 68.4 1.0
O1B E:GTP501 2.4 61.7 1.0
CD E:GLU71 3.2 68.4 1.0
PG E:GTP501 3.2 61.7 1.0
OE1 E:GLN11 3.5 62.5 1.0
O3G E:GTP501 3.6 61.7 1.0
PB E:GTP501 3.6 61.7 1.0
CB E:GLN11 3.8 62.5 1.0
O3B E:GTP501 3.8 61.7 1.0
OD2 E:ASP98 3.9 66.2 1.0
CG E:GLU71 4.0 68.4 1.0
OE1 E:GLU71 4.0 68.4 1.0
CD E:GLN11 4.1 62.5 1.0
NZ I:LYS252 4.1 64.0 1.0
OD1 E:ASP98 4.2 66.2 1.0
O1A E:GTP501 4.2 61.7 1.0
O2G E:GTP501 4.4 61.7 1.0
CG E:ASP98 4.4 66.2 1.0
N E:GLN11 4.5 62.5 1.0
CG E:GLN11 4.5 62.5 1.0
O3A E:GTP501 4.6 61.7 1.0
O2B E:GTP501 4.7 61.7 1.0
CA E:GLN11 4.8 62.5 1.0
PA E:GTP501 4.9 61.7 1.0

Reference:

M.P.M.H.Benoit, A.B.Asenjo, M.Paydar, S.Dhakal, B.Kwok, H.Sosa. Structural Basis of Mechano-Chemical Coupling By the Mitotic Kinesin KIF14 To Be Published.
Page generated: Tue Oct 1 23:17:53 2024

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