Magnesium in PDB 6wwn: KIF14[391-748] - Adp-Alfx in Complex with A Microtubule

Other elements in 6wwn:

The structure of KIF14[391-748] - Adp-Alfx in Complex with A Microtubule also contains other interesting chemical elements:

Aluminium (Al) 1 atom
Fluorine (F) 3 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the KIF14[391-748] - Adp-Alfx in Complex with A Microtubule (pdb code 6wwn). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the KIF14[391-748] - Adp-Alfx in Complex with A Microtubule, PDB code: 6wwn:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in 6wwn

Go back to Magnesium Binding Sites List in 6wwn
Magnesium binding site 1 out of 2 in the KIF14[391-748] - Adp-Alfx in Complex with A Microtubule


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of KIF14[391-748] - Adp-Alfx in Complex with A Microtubule within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg502

b:54.9
occ:1.00
O1G A:GTP501 2.0 52.3 1.0
O2G A:GTP501 2.2 52.3 1.0
PG A:GTP501 2.5 52.3 1.0
OD2 A:ASP98 2.6 55.7 1.0
OE1 A:GLU71 3.0 55.3 1.0
O1B A:GTP501 3.2 52.3 1.0
O3B A:GTP501 3.4 52.3 1.0
CG A:ASP98 3.6 55.7 1.0
OD1 A:ASP98 3.8 55.7 1.0
O3G A:GTP501 3.8 52.3 1.0
PB A:GTP501 3.9 52.3 1.0
CD A:GLU71 4.2 55.3 1.0
CB A:GLU71 4.4 55.3 1.0
OD1 A:ASP69 4.4 54.3 1.0
O3A A:GTP501 4.6 52.3 1.0
NZ B:LYS252 4.7 52.5 1.0
CB A:ASP98 4.9 55.7 1.0
CG A:GLU71 5.0 55.3 1.0

Magnesium binding site 2 out of 2 in 6wwn

Go back to Magnesium Binding Sites List in 6wwn
Magnesium binding site 2 out of 2 in the KIF14[391-748] - Adp-Alfx in Complex with A Microtubule


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of KIF14[391-748] - Adp-Alfx in Complex with A Microtubule within 5.0Å range:
probe atom residue distance (Å) B Occ
K:Mg802

b:72.0
occ:1.00
F1 K:AF3800 2.2 71.4 0.6
O2B K:ADP801 2.2 72.7 1.0
OG K:SER603 2.2 70.1 1.0
O1B K:ADP801 2.4 72.7 1.0
OG K:SER489 2.5 73.2 1.0
PB K:ADP801 2.8 72.7 1.0
AL K:AF3800 3.1 71.4 0.6
CB K:SER489 3.1 73.2 1.0
CB K:SER603 3.6 70.1 1.0
O3B K:ADP801 3.9 72.7 1.0
O3A K:ADP801 4.0 72.7 1.0
OD2 K:ASP638 4.0 70.1 1.0
F2 K:AF3800 4.1 71.4 0.6
N K:SER603 4.1 70.1 1.0
O1A K:ADP801 4.1 72.7 1.0
N K:SER489 4.2 73.2 1.0
O2A K:ADP801 4.2 72.7 1.0
CA K:SER489 4.3 73.2 1.0
PA K:ADP801 4.3 72.7 1.0
CA K:SER603 4.4 70.1 1.0
O K:SER603 4.4 70.1 1.0
F3 K:AF3800 4.5 71.4 0.6
O K:LEU639 4.5 67.8 1.0
OD1 K:ASP638 4.7 70.1 1.0
CG K:ASP638 4.8 70.1 1.0
CG K:LYS488 4.8 71.0 1.0
NH1 K:ARG591 4.9 71.8 1.0
C K:SER603 5.0 70.1 1.0
NZ K:LYS488 5.0 71.0 1.0

Reference:

M.P.M.H.Benoit, A.B.Asenjo, M.Paydar, S.Dhakal, B.Kwok, H.Sosa. Structural Basis of Mechano-Chemical Coupling By the Mitotic Kinesin KIF14 To Be Published.
Page generated: Sun Jul 11 14:59:16 2021

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