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Magnesium in PDB 6wwo: KIF14[391-748] - Amp-Pnp in Complex with A Microtubule

Magnesium Binding Sites:

The binding sites of Magnesium atom in the KIF14[391-748] - Amp-Pnp in Complex with A Microtubule (pdb code 6wwo). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the KIF14[391-748] - Amp-Pnp in Complex with A Microtubule, PDB code: 6wwo:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in 6wwo

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Magnesium binding site 1 out of 2 in the KIF14[391-748] - Amp-Pnp in Complex with A Microtubule


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of KIF14[391-748] - Amp-Pnp in Complex with A Microtubule within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg502

b:33.3
occ:1.00
O1G A:GTP501 2.0 29.5 1.0
OE2 A:GLU71 2.0 34.9 1.0
CD A:GLU71 2.6 34.9 1.0
OD2 A:ASP98 3.0 33.2 1.0
OE1 A:GLU71 3.3 34.9 1.0
O1B A:GTP501 3.3 29.5 1.0
CG A:GLU71 3.5 34.9 1.0
PG A:GTP501 3.5 29.5 1.0
OE1 A:GLN11 3.9 31.0 1.0
CG A:ASP98 4.1 33.2 1.0
NZ B:LYS252 4.1 29.4 1.0
O3G A:GTP501 4.2 29.5 1.0
O2G A:GTP501 4.2 29.5 1.0
O1A A:GTP501 4.2 29.5 1.0
CB A:GLN11 4.2 31.0 1.0
PB A:GTP501 4.3 29.5 1.0
O3B A:GTP501 4.3 29.5 1.0
OD1 A:ASP98 4.5 33.2 1.0
CD A:GLN11 4.5 31.0 1.0
O3A A:GTP501 4.6 29.5 1.0
CB A:GLU71 4.6 34.9 1.0
N A:GLN11 4.7 31.0 1.0
OD1 A:ASP69 4.7 33.3 1.0
O B:ASN247 4.8 31.5 1.0
CB B:ASN247 4.9 31.5 1.0
CG A:GLN11 4.9 31.0 1.0
OD2 A:ASP69 4.9 33.3 1.0

Magnesium binding site 2 out of 2 in 6wwo

Go back to Magnesium Binding Sites List in 6wwo
Magnesium binding site 2 out of 2 in the KIF14[391-748] - Amp-Pnp in Complex with A Microtubule


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of KIF14[391-748] - Amp-Pnp in Complex with A Microtubule within 5.0Å range:
probe atom residue distance (Å) B Occ
K:Mg801

b:50.7
occ:1.00
OG K:SER489 2.0 53.1 1.0
OG K:SER603 2.2 50.1 1.0
O1G K:ANP802 2.3 53.4 1.0
CB K:SER603 2.8 50.1 1.0
O2B K:ANP802 3.0 53.4 1.0
OD2 K:ASP638 3.2 50.6 1.0
CB K:SER489 3.3 53.1 1.0
O K:LEU639 3.5 47.6 1.0
PG K:ANP802 3.7 53.4 1.0
NH2 K:ARG591 3.8 51.6 1.0
CA K:SER603 3.9 50.1 1.0
N K:SER603 4.0 50.1 1.0
PB K:ANP802 4.1 53.4 1.0
CZ K:ARG591 4.2 51.6 1.0
O3G K:ANP802 4.3 53.4 1.0
NH1 K:ARG591 4.3 51.6 1.0
CG K:ASP638 4.3 50.6 1.0
O1B K:ANP802 4.4 53.4 1.0
CA K:SER489 4.4 53.1 1.0
N3B K:ANP802 4.4 53.4 1.0
N K:SER489 4.5 53.1 1.0
CG K:LYS488 4.6 51.7 1.0
OD1 K:ASP638 4.7 50.6 1.0
C K:LEU639 4.7 47.6 1.0
O K:SER603 4.8 50.1 1.0
O2G K:ANP802 4.8 53.4 1.0
C K:SER603 4.8 50.1 1.0

Reference:

M.P.M.H.Benoit, A.B.Asenjo, M.Paydar, S.Dhakal, B.Kwok, H.Sosa. Structural Basis of Mechano-Chemical Coupling By the Mitotic Kinesin KIF14 To Be Published.
Page generated: Tue Oct 1 23:18:40 2024

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