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Magnesium in PDB 6wzk: LY3041658 Fab Bound to CXCL3

Protein crystallography data

The structure of LY3041658 Fab Bound to CXCL3, PDB code: 6wzk was solved by J.D.Durbin, Z.Druzina, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 26.02 / 1.80
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 62.017, 65.159, 281.747, 90.00, 90.00, 90.00
R / Rfree (%) 17.8 / 20.9

Magnesium Binding Sites:

The binding sites of Magnesium atom in the LY3041658 Fab Bound to CXCL3 (pdb code 6wzk). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the LY3041658 Fab Bound to CXCL3, PDB code: 6wzk:

Magnesium binding site 1 out of 1 in 6wzk

Go back to Magnesium Binding Sites List in 6wzk
Magnesium binding site 1 out of 1 in the LY3041658 Fab Bound to CXCL3


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of LY3041658 Fab Bound to CXCL3 within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Mg302

b:29.6
occ:1.00
O D:HOH479 1.9 34.1 1.0
O D:HOH480 1.9 27.6 1.0
OE1 D:GLU79 2.1 24.2 1.0
O D:HOH443 2.1 28.7 1.0
CD D:GLU79 3.0 22.1 1.0
OE2 D:GLU79 3.3 24.8 1.0
O D:HOH512 4.0 28.4 1.0
O D:HOH441 4.1 33.1 1.0
CD D:PRO80 4.2 18.6 1.0
CG D:GLU79 4.4 16.4 1.0
CB D:GLU79 4.9 14.5 1.0
CG D:PRO80 5.0 23.5 1.0

Reference:

J.S.Boyles, C.B.Beidler, B.A.Strifler, D.S.Girard, Z.Druzina, J.D.Durbin, M.L.Swearingen, L.N.Lee, K.Kikly, S.Chintharlapalli, D.R.Witcher. Discovery and Characterization of A Neutralizing Pan-Elr+Cxc Chemokine Monoclonal Antibody. Mabs V. 12 31880.
ISSN: ESSN 1942-0870
PubMed: 33183151
DOI: 10.1080/19420862.2020.1831880
Page generated: Tue Oct 1 23:19:51 2024

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