Magnesium in PDB 6xbz: Structure of the Human Cdk-Activating Kinase

All present enzymatic activity of Structure of the Human Cdk-Activating Kinase:
2.7.11.22; 2.7.11.23;

The binding sites of Magnesium atom in the Structure of the Human Cdk-Activating Kinase (pdb code 6xbz). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Structure of the Human Cdk-Activating Kinase, PDB code: 6xbz:

Magnesium binding site 1 out of 1 in the Structure of the Human Cdk-Activating Kinase


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of the Human Cdk-Activating Kinase within 5.0Å range: probe atom residue distance (Å) B Occ J:Mg401 b:83.3 occ:1.00 O3B J:AGS402 2.0 81.0 1.0 O2A J:AGS402 2.1 81.0 1.0 O2G J:AGS402 2.2 81.0 1.0 PG J:AGS402 2.3 81.0 1.0 S1G J:AGS402 3.0 81.0 1.0 PB J:AGS402 3.3 81.0 1.0 O2B J:AGS402 3.4 81.0 1.0 PA J:AGS402 3.5 81.0 1.0 O3G J:AGS402 3.8 81.0 1.0 O3' J:AGS402 3.8 81.0 1.0 O3A J:AGS402 3.9 81.0 1.0 C5' J:AGS402 4.3 81.0 1.0 ND2 J:ASN141 4.3 41.5 1.0 O5' J:AGS402 4.4 81.0 1.0 C3' J:AGS402 4.4 81.0 1.0 O1B J:AGS402 4.5 81.0 1.0 O1A J:AGS402 4.5 81.0 1.0 CA J:GLY21 4.6 85.5 1.0 O J:GLU20 4.7 87.0 1.0 C4' J:AGS402 4.9 81.0 1.0

B.J.Greber, J.M.Perez-Bertoldi, K.Lim, A.T.Iavarone, D.B.Toso, E.Nogales. The Cryoelectron Microscopy Structure of the Human Cdk-Activating Kinase. Proc.Natl.Acad.Sci.Usa V. 117 22849 2020.
ISSN: ESSN 1091-6490
PubMed: 32855301
DOI: 10.1073/PNAS.2009627117