Magnesium in PDB 6xjn: Human Atlastin-1 (Residues 1-439) Bound to Gdp-MG2+ Exhibits An Ordered Amino Terminus

The structure of Human Atlastin-1 (Residues 1-439) Bound to Gdp-MG2+ Exhibits An Ordered Amino Terminus, PDB code: 6xjn was solved by J.P.O'donnell, H.Sondermann, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	40.86 / 2.20
Space group	I 2 2 2
Cell size a, b, c (Å), α, β, γ (°)	54.17, 138.86, 202.19, 90, 90, 90
R / Rfree (%)	20.1 / 23.7

The binding sites of Magnesium atom in the Human Atlastin-1 (Residues 1-439) Bound to Gdp-MG2+ Exhibits An Ordered Amino Terminus (pdb code 6xjn). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Human Atlastin-1 (Residues 1-439) Bound to Gdp-MG2+ Exhibits An Ordered Amino Terminus, PDB code: 6xjn:

Magnesium binding site 1 out of 1 in the Human Atlastin-1 (Residues 1-439) Bound to Gdp-MG2+ Exhibits An Ordered Amino Terminus


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Human Atlastin-1 (Residues 1-439) Bound to Gdp-MG2+ Exhibits An Ordered Amino Terminus within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg502 b:81.4 occ:1.00 NE2 A:GLN148 2.4 74.0 1.0 OD2 A:ASP146 2.5 72.6 1.0 O3B A:GDP501 2.5 68.7 1.0 O A:HOH654 3.2 60.4 1.0 CD A:GLN148 3.4 84.5 1.0 N A:SER81 3.4 52.9 1.0 CB A:SER81 3.4 54.9 1.0 CG A:ASP146 3.5 68.6 1.0 O A:HOH679 3.5 73.2 1.0 OD1 A:ASP146 3.7 64.4 1.0 CA A:SER81 3.8 63.6 1.0 PB A:GDP501 3.8 60.6 1.0 CB A:LYS80 3.9 57.7 1.0 CG A:GLN148 3.9 80.8 1.0 C A:LYS80 4.1 60.6 1.0 O1B A:GDP501 4.2 55.9 1.0 OE1 A:GLN148 4.3 86.2 1.0 O2B A:GDP501 4.4 54.9 1.0 CE A:LYS80 4.4 56.6 1.0 OG A:SER81 4.5 65.4 1.0 CA A:LYS80 4.5 58.0 1.0 NZ A:LYS80 4.6 50.7 1.0 CB A:ASP146 4.9 60.1 1.0 O A:LYS80 4.9 54.5 1.0

J.P.O'donnell, C.M.Kelly, H.Sondermann. Intrinsic and Extrinsic Regulation of Atlastin By A Short Amino-Terminal Hypervariable Region To Be Published.