Magnesium in PDB 6xld: Full-Length HSC82 in Complex with AHA1 Ctd in the Presence of Amppnp

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Full-Length HSC82 in Complex with AHA1 Ctd in the Presence of Amppnp (pdb code 6xld). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Full-Length HSC82 in Complex with AHA1 Ctd in the Presence of Amppnp, PDB code: 6xld:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in 6xld

Go back to Magnesium Binding Sites List in 6xld
Magnesium binding site 1 out of 2 in the Full-Length HSC82 in Complex with AHA1 Ctd in the Presence of Amppnp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Full-Length HSC82 in Complex with AHA1 Ctd in the Presence of Amppnp within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg802

b:42.5
occ:1.00
O1B A:ANP801 2.1 46.3 1.0
OD1 A:ASN37 2.2 47.4 1.0
O3G A:ANP801 2.4 46.3 1.0
O1A A:ANP801 2.5 46.3 1.0
O3A A:ANP801 2.9 46.3 1.0
PB A:ANP801 2.9 46.3 1.0
O1G A:ANP801 3.1 46.3 1.0
CG A:ASN37 3.1 47.4 1.0
PG A:ANP801 3.1 46.3 1.0
PA A:ANP801 3.2 46.3 1.0
ND2 A:ASN37 3.4 47.4 1.0
OE1 A:GLU33 3.4 44.8 1.0
CA A:GLY123 3.6 43.2 1.0
N3B A:ANP801 3.6 46.3 1.0
C A:GLY123 3.9 43.2 1.0
N A:PHE124 3.9 44.8 1.0
N A:GLY123 4.0 43.2 1.0
O5' A:ANP801 4.1 46.3 1.0
O2B A:ANP801 4.3 46.3 1.0
O2A A:ANP801 4.4 46.3 1.0
CB A:ASN37 4.5 47.4 1.0
O A:GLU33 4.6 44.8 1.0
O2G A:ANP801 4.6 46.3 1.0
OG A:SER36 4.7 44.4 1.0
CD A:GLU33 4.7 44.8 1.0
O A:GLY123 4.7 43.2 1.0
CA A:GLY118 4.9 52.5 1.0
CA A:PHE124 4.9 44.8 1.0
CA A:ASN37 4.9 47.4 1.0

Magnesium binding site 2 out of 2 in 6xld

Go back to Magnesium Binding Sites List in 6xld
Magnesium binding site 2 out of 2 in the Full-Length HSC82 in Complex with AHA1 Ctd in the Presence of Amppnp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Full-Length HSC82 in Complex with AHA1 Ctd in the Presence of Amppnp within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg802

b:48.7
occ:1.00
O1B B:ANP801 2.1 49.5 1.0
OD1 B:ASN37 2.1 46.5 1.0
O1A B:ANP801 2.1 49.5 1.0
OE2 B:GLU33 2.2 48.2 1.0
O3G B:ANP801 2.6 49.5 1.0
CG B:ASN37 2.9 46.5 1.0
O3A B:ANP801 3.0 49.5 1.0
ND2 B:ASN37 3.0 46.5 1.0
PB B:ANP801 3.0 49.5 1.0
PA B:ANP801 3.1 49.5 1.0
CD B:GLU33 3.2 48.2 1.0
O1G B:ANP801 3.4 49.5 1.0
PG B:ANP801 3.4 49.5 1.0
CG B:GLU33 3.6 48.2 1.0
N3B B:ANP801 3.9 49.5 1.0
O5' B:ANP801 3.9 49.5 1.0
N B:PHE124 3.9 47.6 1.0
CA B:GLY123 3.9 44.6 1.0
C B:GLY123 4.1 44.6 1.0
N B:GLY123 4.3 44.6 1.0
O2A B:ANP801 4.3 49.5 1.0
O2B B:ANP801 4.3 49.5 1.0
OE1 B:GLU33 4.3 48.2 1.0
CB B:ASN37 4.4 46.5 1.0
O B:GLU33 4.6 48.2 1.0
CA B:PHE124 4.7 47.6 1.0
OG B:SER36 4.8 46.8 1.0
O B:GLY123 4.8 44.6 1.0
O2G B:ANP801 4.8 49.5 1.0
CA B:ASN37 4.9 46.5 1.0
CA B:GLY118 5.0 49.5 1.0
CB B:GLU33 5.0 48.2 1.0

Reference:

Y.X.Liu, M.Sun, A.G.Myasnikov, D.Elnatan, D.A.Agard. Full-Length HSC82 in Complex with AHA1 Ctd in the Presence of Amppnp To Be Published.
Page generated: Sun Jul 11 15:02:42 2021

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