Magnesium in PDB 6y1i: Human EG5 Motor Domain Mutant R234C

The structure of Human EG5 Motor Domain Mutant R234C, PDB code: 6y1i was solved by I.Garcia-Saez, D.A.Skoufias, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	47.70 / 3.00
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	87.428, 87.603, 95.065, 90, 116.82, 90
R / Rfree (%)	27.2 / 30.7

The binding sites of Magnesium atom in the Human EG5 Motor Domain Mutant R234C (pdb code 6y1i). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 3 binding sites of Magnesium where determined in the Human EG5 Motor Domain Mutant R234C, PDB code: 6y1i:
Jump to Magnesium binding site number: 1; 2; 3;

Magnesium binding site 1 out of 3 in the Human EG5 Motor Domain Mutant R234C


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Human EG5 Motor Domain Mutant R234C within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg402 b:57.8 occ:1.00 O1B A:ADP401 2.0 96.7 1.0 OG1 A:THR112 2.3 88.4 1.0 O3B A:ADP401 2.7 96.2 1.0 PB A:ADP401 2.9 93.3 1.0 O1A A:ADP401 3.2 84.2 1.0 CB A:THR112 3.3 88.3 1.0 PA A:ADP401 3.9 71.6 1.0 O3A A:ADP401 3.9 55.8 1.0 O2B A:ADP401 4.1 62.6 1.0 O2A A:ADP401 4.1 78.0 1.0 N A:THR112 4.2 77.2 1.0 CG2 A:THR112 4.3 107.0 1.0 CA A:THR112 4.4 75.7 1.0 OD2 A:ASP265 4.5 56.9 1.0

Magnesium binding site 2 out of 3 in the Human EG5 Motor Domain Mutant R234C


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Human EG5 Motor Domain Mutant R234C within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg402 b:69.8 occ:1.00 OG1 B:THR112 2.2 91.4 1.0 O3B B:ADP401 2.3 102.8 1.0 O1A B:ADP401 3.0 73.7 1.0 CB B:THR112 3.1 91.8 1.0 O1B B:ADP401 3.2 144.6 1.0 PB B:ADP401 3.3 113.2 1.0 PA B:ADP401 3.8 95.1 1.0 CG2 B:THR112 4.0 105.3 1.0 O3A B:ADP401 4.1 66.9 1.0 O2A B:ADP401 4.1 54.7 1.0 N B:THR112 4.2 88.2 1.0 CA B:THR112 4.3 87.4 1.0 O2B B:ADP401 4.6 54.3 1.0 OD2 B:ASP265 4.7 79.1 1.0 OG B:SER232 4.9 153.0 1.0

Magnesium binding site 3 out of 3 in the Human EG5 Motor Domain Mutant R234C


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of Human EG5 Motor Domain Mutant R234C within 5.0Å range: probe atom residue distance (Å) B Occ C:Mg402 b:331.3 occ:1.00 OG1 C:THR112 2.0 407.4 1.0 O2B C:ADP401 2.4 424.8 1.0 O3B C:ADP401 3.0 401.2 1.0 PB C:ADP401 3.2 407.6 1.0 CB C:THR112 3.2 359.3 1.0 O1A C:ADP401 3.7 416.1 1.0 O2A C:ADP401 3.8 409.7 1.0 CG2 C:THR112 4.1 342.8 1.0 PA C:ADP401 4.1 409.9 1.0 O3A C:ADP401 4.2 416.3 1.0 OD2 C:ASP265 4.3 328.2 1.0 N C:THR112 4.3 373.8 1.0 CA C:THR112 4.3 366.8 1.0 O1B C:ADP401 4.4 377.8 1.0 OG C:SER232 4.8 374.3 1.0 OD1 C:ASP265 5.0 329.2 1.0

I.Garcia-Saez, D.A.Skoufias. Human EG5 Motor Domain Mutant R234C To Be Published.