Magnesium in PDB 6ycz: Plasmodium Falciparum Myosin A Delta-Nter, Post-Rigor State

The structure of Plasmodium Falciparum Myosin A Delta-Nter, Post-Rigor State, PDB code: 6ycz was solved by D.Moussaoui, J.P.Robblee, D.Auguin, E.B.Krementsova, J.Robert-Paganin, K.M.Trybus, A.Houdusse, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	48.30 / 3.27
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	90.080, 114.430, 170.710, 90.00, 90.00, 90.00
R / Rfree (%)	17.9 / 22.7

The binding sites of Magnesium atom in the Plasmodium Falciparum Myosin A Delta-Nter, Post-Rigor State (pdb code 6ycz). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Plasmodium Falciparum Myosin A Delta-Nter, Post-Rigor State, PDB code: 6ycz:

Magnesium binding site 1 out of 1 in the Plasmodium Falciparum Myosin A Delta-Nter, Post-Rigor State


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Plasmodium Falciparum Myosin A Delta-Nter, Post-Rigor State within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg904 b:52.0 occ:1.00 O A:HOH1002 1.9 76.7 1.0 O A:HOH1001 2.2 54.4 1.0 OG A:SER246 2.4 80.1 1.0 CB A:SER246 2.5 71.9 1.0 O3B A:ADP905 2.5 65.5 1.0 OG1 A:THR198 2.7 45.5 1.0 N A:SER246 3.2 66.2 1.0 O1B A:ADP905 3.2 64.3 1.0 CA A:SER246 3.4 66.5 1.0 PB A:ADP905 3.4 61.8 1.0 O A:HOH1004 3.7 55.0 1.0 CB A:THR198 3.9 54.1 1.0 NZ A:LYS197 4.0 55.4 1.0 O A:HOH1003 4.2 69.3 1.0 OD2 A:ASP469 4.3 0.3 1.0 O3A A:ADP905 4.4 60.3 1.0 O A:SER246 4.4 68.8 1.0 C A:SER245 4.4 70.1 1.0 C A:SER246 4.4 69.0 1.0 OD1 A:ASP469 4.5 96.9 1.0 O2B A:ADP905 4.6 58.1 1.0 N A:THR198 4.6 53.2 1.0 O A:ASN244 4.7 69.6 1.0 ND2 A:ASN236 4.8 76.0 1.0 CA A:SER245 4.8 65.8 1.0 CE A:LYS197 4.8 43.2 1.0 CG A:ASP469 4.8 96.7 1.0 CG2 A:THR198 4.8 58.0 1.0 CA A:THR198 4.9 52.6 1.0

D.Moussaoui, J.P.Robblee, D.Auguin, E.B.Krementsova, S.Haase, T.C.A.Blake, J.Baum, J.Robert-Paganin, K.M.Trybus, A.Houdusse. Full-Length Plasmodium Falciparum Myosin A and Essential Light Chain Pfelc Structures Provide New Anti-Malarial Targets. Elife V. 9 2020.
ISSN: ESSN 2050-084X
PubMed: 33046215
DOI: 10.7554/ELIFE.60581