Magnesium in PDB 6z47: Smooth Muscle Myosin Shutdown State Heads Region

The binding sites of Magnesium atom in the Smooth Muscle Myosin Shutdown State Heads Region (pdb code 6z47). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 4 binding sites of Magnesium where determined in the Smooth Muscle Myosin Shutdown State Heads Region, PDB code: 6z47:
Jump to Magnesium binding site number: 1; 2; 3; 4;

Magnesium binding site 1 out of 4 in the Smooth Muscle Myosin Shutdown State Heads Region


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Smooth Muscle Myosin Shutdown State Heads Region within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg2001 b:0.8 occ:1.00 O4 A:PO42003 2.0 0.2 1.0 O2B A:ADP2002 2.1 1.0 1.0 OG1 A:THR184 2.2 0.8 1.0 PB A:ADP2002 3.2 0.6 1.0 O1B A:ADP2002 3.3 0.8 1.0 P A:PO42003 3.4 0.8 1.0 CB A:THR184 3.6 0.2 1.0 OG A:SER246 3.6 0.1 1.0 O3 A:PO42003 4.0 0.3 1.0 ND2 A:ASN242 4.0 0.3 1.0 OD1 A:ASN244 4.0 0.6 1.0 O2 A:PO42003 4.1 0.7 1.0 O1A A:ADP2002 4.1 0.7 1.0 O A:ASN244 4.2 0.1 1.0 N A:THR184 4.2 0.4 1.0 O3A A:ADP2002 4.2 1.0 1.0 O3B A:ADP2002 4.3 0.1 1.0 N A:SER246 4.3 0.9 1.0 O1 A:PO42003 4.4 0.7 1.0 CG2 A:THR184 4.4 0.5 1.0 CA A:THR184 4.5 0.7 1.0 CB A:SER246 4.5 0.4 1.0 PA A:ADP2002 4.5 1.0 1.0 O2A A:ADP2002 4.6 0.3 1.0 O A:SER179 4.9 0.6 1.0 CA A:SER245 5.0 0.6 1.0

Magnesium binding site 2 out of 4 in the Smooth Muscle Myosin Shutdown State Heads Region


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Smooth Muscle Myosin Shutdown State Heads Region within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg2001 b:38.3 occ:1.00 OG1 B:THR184 1.5 0.8 1.0 OG B:SER246 1.9 0.9 1.0 O2 B:PO42003 2.1 38.5 1.0 O2B B:ADP2002 2.4 0.1 1.0 CB B:THR184 2.9 0.9 1.0 CB B:SER246 2.9 0.6 1.0 CG2 B:THR184 3.3 0.5 1.0 O1B B:ADP2002 3.4 0.8 1.0 PB B:ADP2002 3.4 0.3 1.0 N B:SER246 3.5 0.6 1.0 O B:ASN244 3.6 0.7 1.0 P B:PO42003 3.7 41.7 1.0 CA B:SER246 3.8 0.4 1.0 CA B:THR184 3.9 0.0 1.0 N B:THR184 4.0 0.8 1.0 O1A B:ADP2002 4.1 0.0 1.0 O4 B:PO42003 4.3 38.7 1.0 O3A B:ADP2002 4.4 0.4 1.0 O3 B:PO42003 4.4 45.9 1.0 O3B B:ADP2002 4.5 0.4 1.0 C B:SER245 4.6 0.5 1.0 O1 B:PO42003 4.6 38.7 1.0 PA B:ADP2002 4.7 1.0 1.0 ND2 B:ASN236 4.7 0.9 1.0 C B:ASN244 4.8 0.5 1.0 O2A B:ADP2002 4.9 1.0 1.0 ND2 B:ASN242 4.9 0.3 1.0 CA B:SER245 5.0 0.8 1.0

Magnesium binding site 3 out of 4 in the Smooth Muscle Myosin Shutdown State Heads Region


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of Smooth Muscle Myosin Shutdown State Heads Region within 5.0Å range: probe atom residue distance (Å) B Occ E:Mg201 b:0.8 occ:1.00 OD1 E:ASN44 2.1 0.8 1.0 OD2 E:ASP53 2.5 0.2 1.0 OD1 E:ASP42 2.9 0.0 1.0 CG E:ASN44 2.9 0.5 1.0 OD1 E:ASP46 3.3 0.9 1.0 O E:PHE48 3.5 0.9 1.0 CG E:ASP53 3.6 0.1 1.0 ND2 E:ASN44 3.6 0.1 1.0 N E:ASN44 3.7 1.0 1.0 CA E:ASP42 3.8 0.5 1.0 C E:ASP42 3.9 0.7 1.0 CB E:ASN44 3.9 0.5 1.0 CG E:ASP46 3.9 0.8 1.0 N E:GLN43 3.9 0.9 1.0 N E:ARG45 4.0 0.9 1.0 CG E:ASP42 4.0 0.5 1.0 CA E:ASN44 4.1 1.0 1.0 N E:ASP46 4.2 0.2 1.0 OD2 E:ASP46 4.2 0.7 1.0 C E:ASN44 4.3 0.2 1.0 CB E:ASP53 4.4 0.8 1.0 O E:ASP42 4.4 0.2 1.0 OD1 E:ASP53 4.5 0.3 1.0 CB E:ASP42 4.5 0.3 1.0 C E:PHE48 4.6 0.5 1.0 O E:ILE41 4.6 0.2 1.0 CB E:ASP50 4.7 0.8 1.0 C E:GLN43 4.7 0.4 1.0 N E:GLY47 4.8 0.3 1.0 N E:PHE48 4.8 0.5 1.0 CB E:ASP46 4.8 0.1 1.0 CA E:ASP46 4.9 0.6 1.0 CA E:ARG45 4.9 0.8 1.0 CA E:GLN43 4.9 0.6 1.0 N E:ASP42 5.0 0.1 1.0

Magnesium binding site 4 out of 4 in the Smooth Muscle Myosin Shutdown State Heads Region


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 4 of Smooth Muscle Myosin Shutdown State Heads Region within 5.0Å range: probe atom residue distance (Å) B Occ F:Mg201 b:0.6 occ:1.00 OD1 F:ASP42 2.0 0.8 1.0 OD1 F:ASN44 2.6 0.4 1.0 O F:PHE48 2.8 0.5 1.0 OD1 F:ASP46 2.9 0.8 1.0 CG F:ASP42 3.0 0.5 1.0 CG F:ASN44 3.3 0.2 1.0 OD2 F:ASP53 3.4 0.2 1.0 CG F:ASP46 3.5 0.2 1.0 ND2 F:ASN44 3.6 0.4 1.0 OD2 F:ASP46 3.7 0.8 1.0 C F:PHE48 3.7 0.7 1.0 OD2 F:ASP42 3.7 1.0 1.0 CB F:ASP42 4.0 0.7 1.0 CA F:ASP42 4.0 0.1 1.0 N F:ASP46 4.0 0.1 1.0 CG F:ASP53 4.1 0.1 1.0 N F:ARG45 4.1 0.3 1.0 OD1 F:ASP53 4.1 0.2 1.0 C F:ASP42 4.3 1.0 1.0 N F:PHE48 4.4 0.8 1.0 N F:ASN44 4.4 0.0 1.0 CB F:ASN44 4.5 0.6 1.0 CA F:PHE48 4.5 0.7 1.0 C F:ASN44 4.5 0.9 1.0 CB F:ASP46 4.6 0.1 1.0 N F:ILE49 4.6 0.7 1.0 CA F:ILE49 4.7 0.0 1.0 CA F:ASN44 4.7 0.4 1.0 O F:ASP42 4.7 0.2 1.0 CA F:ASP46 4.7 0.1 1.0 CB F:PHE48 4.7 0.3 1.0 N F:GLY47 4.7 0.8 1.0 N F:GLN43 4.7 0.1 1.0 CA F:ARG45 4.8 0.2 1.0 C F:ARG45 4.8 0.8 1.0

C.A.Scarff, G.Carrington, D.Casas Mao, J.M.Chalovich, P.J.Knight, N.A.Ranson, M.Peckham. Structure of the Shutdown State of Myosin-2 Nature 2020.
ISSN: ESSN 1476-4687
DOI: 10.1038/S41586-020-2990-5