Magnesium in PDB 6z5r: Rc-LH1(16) Complex From Rhodopseudomonas Palustris
Other elements in 6z5r:
The structure of Rc-LH1(16) Complex From Rhodopseudomonas Palustris also contains other interesting chemical elements:
Magnesium Binding Sites:
Magnesium binding site 1 out
of 36 in 6z5r
Go back to
Magnesium Binding Sites List in 6z5r
Magnesium binding site 1 out
of 36 in the Rc-LH1(16) Complex From Rhodopseudomonas Palustris
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 1 of Rc-LH1(16) Complex From Rhodopseudomonas Palustris within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Mg101
b:36.5
occ:1.00
|
MG
|
C:BCL101
|
0.0
|
36.5
|
1.0
|
NC
|
C:BCL101
|
2.0
|
36.5
|
1.0
|
NA
|
C:BCL101
|
2.0
|
36.5
|
1.0
|
ND
|
C:BCL101
|
2.0
|
36.5
|
1.0
|
NB
|
C:BCL101
|
2.1
|
36.5
|
1.0
|
C4D
|
C:BCL101
|
3.0
|
36.5
|
1.0
|
C1A
|
C:BCL101
|
3.0
|
36.5
|
1.0
|
C4A
|
C:BCL101
|
3.0
|
36.5
|
1.0
|
C4C
|
C:BCL101
|
3.0
|
36.5
|
1.0
|
C1C
|
C:BCL101
|
3.0
|
36.5
|
1.0
|
NE2
|
C:HIS29
|
3.1
|
31.6
|
1.0
|
C1B
|
C:BCL101
|
3.1
|
36.5
|
1.0
|
C4B
|
C:BCL101
|
3.1
|
36.5
|
1.0
|
C1D
|
C:BCL101
|
3.2
|
36.5
|
1.0
|
CHB
|
C:BCL101
|
3.4
|
36.5
|
1.0
|
CHC
|
C:BCL101
|
3.4
|
36.5
|
1.0
|
CHA
|
C:BCL101
|
3.4
|
36.5
|
1.0
|
CHD
|
C:BCL101
|
3.5
|
36.5
|
1.0
|
C9
|
B:LMT101
|
3.7
|
51.3
|
1.0
|
CE1
|
C:HIS29
|
3.9
|
31.6
|
1.0
|
CD2
|
C:HIS29
|
4.0
|
31.6
|
1.0
|
C11
|
B:LMT101
|
4.2
|
51.3
|
1.0
|
C3D
|
C:BCL101
|
4.2
|
36.5
|
1.0
|
C2A
|
C:BCL101
|
4.3
|
36.5
|
1.0
|
C3A
|
C:BCL101
|
4.3
|
36.5
|
1.0
|
C3C
|
C:BCL101
|
4.3
|
36.5
|
1.0
|
C2C
|
C:BCL101
|
4.3
|
36.5
|
1.0
|
CBB
|
B:BCL102
|
4.3
|
37.2
|
1.0
|
C3B
|
C:BCL101
|
4.4
|
36.5
|
1.0
|
C2B
|
C:BCL101
|
4.4
|
36.5
|
1.0
|
C2D
|
C:BCL101
|
4.4
|
36.5
|
1.0
|
CMB
|
B:BCL102
|
4.4
|
37.2
|
1.0
|
C10
|
B:LMT101
|
4.5
|
51.3
|
1.0
|
C8
|
B:LMT101
|
4.7
|
51.3
|
1.0
|
CBD
|
C:BCL101
|
4.9
|
36.5
|
1.0
|
|
Magnesium binding site 2 out
of 36 in 6z5r
Go back to
Magnesium Binding Sites List in 6z5r
Magnesium binding site 2 out
of 36 in the Rc-LH1(16) Complex From Rhodopseudomonas Palustris
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 2 of Rc-LH1(16) Complex From Rhodopseudomonas Palustris within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Mg102
b:37.9
occ:1.00
|
MG
|
C:BCL102
|
0.0
|
37.9
|
1.0
|
NC
|
C:BCL102
|
2.0
|
37.9
|
1.0
|
NA
|
C:BCL102
|
2.0
|
37.9
|
1.0
|
ND
|
C:BCL102
|
2.0
|
37.9
|
1.0
|
NB
|
C:BCL102
|
2.0
|
37.9
|
1.0
|
NE2
|
D:HIS36
|
2.8
|
36.6
|
1.0
|
C4D
|
C:BCL102
|
3.0
|
37.9
|
1.0
|
C4C
|
C:BCL102
|
3.0
|
37.9
|
1.0
|
C1A
|
C:BCL102
|
3.0
|
37.9
|
1.0
|
C4A
|
C:BCL102
|
3.0
|
37.9
|
1.0
|
C1C
|
C:BCL102
|
3.0
|
37.9
|
1.0
|
C1B
|
C:BCL102
|
3.1
|
37.9
|
1.0
|
C4B
|
C:BCL102
|
3.1
|
37.9
|
1.0
|
C1D
|
C:BCL102
|
3.2
|
37.9
|
1.0
|
CD2
|
D:HIS36
|
3.4
|
36.6
|
1.0
|
CHB
|
C:BCL102
|
3.4
|
37.9
|
1.0
|
CHC
|
C:BCL102
|
3.4
|
37.9
|
1.0
|
CHA
|
C:BCL102
|
3.4
|
37.9
|
1.0
|
CHD
|
C:BCL102
|
3.5
|
37.9
|
1.0
|
CE1
|
D:HIS36
|
3.9
|
36.6
|
1.0
|
CBB
|
E:BCL101
|
4.2
|
38.7
|
1.0
|
C3D
|
C:BCL102
|
4.2
|
37.9
|
1.0
|
C2A
|
C:BCL102
|
4.3
|
37.9
|
1.0
|
C3A
|
C:BCL102
|
4.3
|
37.9
|
1.0
|
C3C
|
C:BCL102
|
4.3
|
37.9
|
1.0
|
C2C
|
C:BCL102
|
4.3
|
37.9
|
1.0
|
C3B
|
C:BCL102
|
4.4
|
37.9
|
1.0
|
C2B
|
C:BCL102
|
4.4
|
37.9
|
1.0
|
C2D
|
C:BCL102
|
4.4
|
37.9
|
1.0
|
CMB
|
E:BCL101
|
4.6
|
38.7
|
1.0
|
CG
|
D:HIS36
|
4.6
|
36.6
|
1.0
|
CAB
|
E:BCL101
|
4.7
|
38.7
|
1.0
|
C25
|
D:6PL102
|
4.8
|
54.4
|
1.0
|
ND1
|
D:HIS36
|
4.9
|
36.6
|
1.0
|
CBD
|
C:BCL102
|
4.9
|
37.9
|
1.0
|
C2B
|
E:BCL101
|
4.9
|
38.7
|
1.0
|
CMD
|
C:BCL101
|
4.9
|
36.5
|
1.0
|
|
Magnesium binding site 3 out
of 36 in 6z5r
Go back to
Magnesium Binding Sites List in 6z5r
Magnesium binding site 3 out
of 36 in the Rc-LH1(16) Complex From Rhodopseudomonas Palustris
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 3 of Rc-LH1(16) Complex From Rhodopseudomonas Palustris within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
E:Mg101
b:38.7
occ:1.00
|
MG
|
E:BCL101
|
0.0
|
38.7
|
1.0
|
NC
|
E:BCL101
|
2.0
|
38.7
|
1.0
|
NA
|
E:BCL101
|
2.0
|
38.7
|
1.0
|
ND
|
E:BCL101
|
2.0
|
38.7
|
1.0
|
NB
|
E:BCL101
|
2.0
|
38.7
|
1.0
|
C4D
|
E:BCL101
|
3.0
|
38.7
|
1.0
|
C4A
|
E:BCL101
|
3.0
|
38.7
|
1.0
|
C1A
|
E:BCL101
|
3.0
|
38.7
|
1.0
|
C4C
|
E:BCL101
|
3.0
|
38.7
|
1.0
|
C1C
|
E:BCL101
|
3.0
|
38.7
|
1.0
|
C1B
|
E:BCL101
|
3.1
|
38.7
|
1.0
|
C4B
|
E:BCL101
|
3.1
|
38.7
|
1.0
|
NE2
|
E:HIS29
|
3.1
|
33.6
|
1.0
|
C1D
|
E:BCL101
|
3.2
|
38.7
|
1.0
|
CHB
|
E:BCL101
|
3.4
|
38.7
|
1.0
|
CHC
|
E:BCL101
|
3.4
|
38.7
|
1.0
|
CHA
|
E:BCL101
|
3.4
|
38.7
|
1.0
|
CHD
|
E:BCL101
|
3.5
|
38.7
|
1.0
|
C10
|
F:LMT101
|
3.7
|
51.8
|
1.0
|
C9
|
F:LMT101
|
3.9
|
51.8
|
1.0
|
CBB
|
C:BCL102
|
3.9
|
37.9
|
1.0
|
CE1
|
E:HIS29
|
3.9
|
33.6
|
1.0
|
CMB
|
C:BCL102
|
4.1
|
37.9
|
1.0
|
CD2
|
E:HIS29
|
4.1
|
33.6
|
1.0
|
C3D
|
E:BCL101
|
4.2
|
38.7
|
1.0
|
C3A
|
E:BCL101
|
4.3
|
38.7
|
1.0
|
C2A
|
E:BCL101
|
4.3
|
38.7
|
1.0
|
C3C
|
E:BCL101
|
4.3
|
38.7
|
1.0
|
C2C
|
E:BCL101
|
4.3
|
38.7
|
1.0
|
C3B
|
E:BCL101
|
4.4
|
38.7
|
1.0
|
C2B
|
E:BCL101
|
4.4
|
38.7
|
1.0
|
C2D
|
E:BCL101
|
4.4
|
38.7
|
1.0
|
C2B
|
C:BCL102
|
4.7
|
37.9
|
1.0
|
CAB
|
C:BCL102
|
4.8
|
37.9
|
1.0
|
C8
|
F:LMT101
|
4.9
|
51.8
|
1.0
|
CBD
|
E:BCL101
|
4.9
|
38.7
|
1.0
|
C3B
|
C:BCL102
|
5.0
|
37.9
|
1.0
|
CMD
|
F:BCL102
|
5.0
|
42.0
|
1.0
|
CMA
|
E:BCL101
|
5.0
|
38.7
|
1.0
|
|
Magnesium binding site 4 out
of 36 in 6z5r
Go back to
Magnesium Binding Sites List in 6z5r
Magnesium binding site 4 out
of 36 in the Rc-LH1(16) Complex From Rhodopseudomonas Palustris
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 4 of Rc-LH1(16) Complex From Rhodopseudomonas Palustris within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
F:Mg102
b:42.0
occ:1.00
|
MG
|
F:BCL102
|
0.0
|
42.0
|
1.0
|
NC
|
F:BCL102
|
2.0
|
42.0
|
1.0
|
NA
|
F:BCL102
|
2.0
|
42.0
|
1.0
|
ND
|
F:BCL102
|
2.0
|
42.0
|
1.0
|
NB
|
F:BCL102
|
2.0
|
42.0
|
1.0
|
NE2
|
F:HIS36
|
2.8
|
39.7
|
1.0
|
C4D
|
F:BCL102
|
3.0
|
42.0
|
1.0
|
C1A
|
F:BCL102
|
3.0
|
42.0
|
1.0
|
C4C
|
F:BCL102
|
3.0
|
42.0
|
1.0
|
C4A
|
F:BCL102
|
3.0
|
42.0
|
1.0
|
C1C
|
F:BCL102
|
3.0
|
42.0
|
1.0
|
C1B
|
F:BCL102
|
3.1
|
42.0
|
1.0
|
C4B
|
F:BCL102
|
3.1
|
42.0
|
1.0
|
C1D
|
F:BCL102
|
3.2
|
42.0
|
1.0
|
CD2
|
F:HIS36
|
3.3
|
39.7
|
1.0
|
CHB
|
F:BCL102
|
3.4
|
42.0
|
1.0
|
CHC
|
F:BCL102
|
3.4
|
42.0
|
1.0
|
CHA
|
F:BCL102
|
3.4
|
42.0
|
1.0
|
CHD
|
F:BCL102
|
3.5
|
42.0
|
1.0
|
CE1
|
F:HIS36
|
4.0
|
39.7
|
1.0
|
C3D
|
F:BCL102
|
4.2
|
42.0
|
1.0
|
CBB
|
G:BCL103
|
4.3
|
39.8
|
1.0
|
C2A
|
F:BCL102
|
4.3
|
42.0
|
1.0
|
C3A
|
F:BCL102
|
4.3
|
42.0
|
1.0
|
C3C
|
F:BCL102
|
4.3
|
42.0
|
1.0
|
C2C
|
F:BCL102
|
4.3
|
42.0
|
1.0
|
C3B
|
F:BCL102
|
4.4
|
42.0
|
1.0
|
C2B
|
F:BCL102
|
4.4
|
42.0
|
1.0
|
C2D
|
F:BCL102
|
4.4
|
42.0
|
1.0
|
CMB
|
G:BCL103
|
4.5
|
39.8
|
1.0
|
CG
|
F:HIS36
|
4.6
|
39.7
|
1.0
|
CAB
|
G:BCL103
|
4.6
|
39.8
|
1.0
|
C2B
|
G:BCL103
|
4.9
|
39.8
|
1.0
|
CBD
|
F:BCL102
|
4.9
|
42.0
|
1.0
|
ND1
|
F:HIS36
|
4.9
|
39.7
|
1.0
|
C3B
|
G:BCL103
|
5.0
|
39.8
|
1.0
|
CD1
|
E:ILE28
|
5.0
|
34.3
|
1.0
|
CMD
|
E:BCL101
|
5.0
|
38.7
|
1.0
|
CAA
|
F:BCL102
|
5.0
|
42.0
|
1.0
|
|
Magnesium binding site 5 out
of 36 in 6z5r
Go back to
Magnesium Binding Sites List in 6z5r
Magnesium binding site 5 out
of 36 in the Rc-LH1(16) Complex From Rhodopseudomonas Palustris
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 5 of Rc-LH1(16) Complex From Rhodopseudomonas Palustris within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
G:Mg103
b:39.8
occ:1.00
|
MG
|
G:BCL103
|
0.0
|
39.8
|
1.0
|
NC
|
G:BCL103
|
2.0
|
39.8
|
1.0
|
NA
|
G:BCL103
|
2.0
|
39.8
|
1.0
|
ND
|
G:BCL103
|
2.0
|
39.8
|
1.0
|
NB
|
G:BCL103
|
2.1
|
39.8
|
1.0
|
C4D
|
G:BCL103
|
3.0
|
39.8
|
1.0
|
C4A
|
G:BCL103
|
3.0
|
39.8
|
1.0
|
C1A
|
G:BCL103
|
3.0
|
39.8
|
1.0
|
C4C
|
G:BCL103
|
3.0
|
39.8
|
1.0
|
C1C
|
G:BCL103
|
3.0
|
39.8
|
1.0
|
C1B
|
G:BCL103
|
3.1
|
39.8
|
1.0
|
NE2
|
G:HIS29
|
3.1
|
34.4
|
1.0
|
C4B
|
G:BCL103
|
3.1
|
39.8
|
1.0
|
C1D
|
G:BCL103
|
3.2
|
39.8
|
1.0
|
CHB
|
G:BCL103
|
3.4
|
39.8
|
1.0
|
CHC
|
G:BCL103
|
3.4
|
39.8
|
1.0
|
CHA
|
G:BCL103
|
3.4
|
39.8
|
1.0
|
CHD
|
G:BCL103
|
3.5
|
39.8
|
1.0
|
C44
|
I:6PL101
|
3.6
|
59.3
|
1.0
|
CE1
|
G:HIS29
|
3.9
|
34.4
|
1.0
|
C45
|
I:6PL101
|
3.9
|
59.3
|
1.0
|
CBB
|
F:BCL102
|
4.0
|
42.0
|
1.0
|
CMB
|
F:BCL102
|
4.0
|
42.0
|
1.0
|
CD2
|
G:HIS29
|
4.1
|
34.4
|
1.0
|
C3D
|
G:BCL103
|
4.2
|
39.8
|
1.0
|
C3A
|
G:BCL103
|
4.3
|
39.8
|
1.0
|
C2A
|
G:BCL103
|
4.3
|
39.8
|
1.0
|
C3C
|
G:BCL103
|
4.3
|
39.8
|
1.0
|
C2C
|
G:BCL103
|
4.3
|
39.8
|
1.0
|
C3B
|
G:BCL103
|
4.4
|
39.8
|
1.0
|
C2B
|
G:BCL103
|
4.4
|
39.8
|
1.0
|
C2D
|
G:BCL103
|
4.4
|
39.8
|
1.0
|
C2B
|
F:BCL102
|
4.7
|
42.0
|
1.0
|
C43
|
I:6PL101
|
4.8
|
59.3
|
1.0
|
CAB
|
F:BCL102
|
4.9
|
42.0
|
1.0
|
CBD
|
G:BCL103
|
4.9
|
39.8
|
1.0
|
|
Magnesium binding site 6 out
of 36 in 6z5r
Go back to
Magnesium Binding Sites List in 6z5r
Magnesium binding site 6 out
of 36 in the Rc-LH1(16) Complex From Rhodopseudomonas Palustris
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 6 of Rc-LH1(16) Complex From Rhodopseudomonas Palustris within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
G:Mg104
b:41.1
occ:1.00
|
MG
|
G:BCL104
|
0.0
|
41.1
|
1.0
|
NC
|
G:BCL104
|
2.0
|
41.1
|
1.0
|
NA
|
G:BCL104
|
2.0
|
41.1
|
1.0
|
ND
|
G:BCL104
|
2.0
|
41.1
|
1.0
|
NB
|
G:BCL104
|
2.0
|
41.1
|
1.0
|
NE2
|
I:HIS36
|
2.8
|
38.7
|
1.0
|
C4D
|
G:BCL104
|
2.9
|
41.1
|
1.0
|
C1A
|
G:BCL104
|
3.0
|
41.1
|
1.0
|
C4A
|
G:BCL104
|
3.0
|
41.1
|
1.0
|
C4C
|
G:BCL104
|
3.0
|
41.1
|
1.0
|
C1C
|
G:BCL104
|
3.0
|
41.1
|
1.0
|
C1B
|
G:BCL104
|
3.1
|
41.1
|
1.0
|
C4B
|
G:BCL104
|
3.1
|
41.1
|
1.0
|
C1D
|
G:BCL104
|
3.2
|
41.1
|
1.0
|
CD2
|
I:HIS36
|
3.4
|
38.7
|
1.0
|
CHB
|
G:BCL104
|
3.4
|
41.1
|
1.0
|
CHC
|
G:BCL104
|
3.4
|
41.1
|
1.0
|
CHA
|
G:BCL104
|
3.4
|
41.1
|
1.0
|
CHD
|
G:BCL104
|
3.5
|
41.1
|
1.0
|
CBB
|
J:BCL101
|
3.9
|
39.6
|
1.0
|
CE1
|
I:HIS36
|
3.9
|
38.7
|
1.0
|
C3D
|
G:BCL104
|
4.2
|
41.1
|
1.0
|
C2A
|
G:BCL104
|
4.3
|
41.1
|
1.0
|
C3A
|
G:BCL104
|
4.3
|
41.1
|
1.0
|
C3C
|
G:BCL104
|
4.3
|
41.1
|
1.0
|
C2C
|
G:BCL104
|
4.3
|
41.1
|
1.0
|
C3B
|
G:BCL104
|
4.4
|
41.1
|
1.0
|
C2B
|
G:BCL104
|
4.4
|
41.1
|
1.0
|
CMB
|
J:BCL101
|
4.4
|
39.6
|
1.0
|
C2D
|
G:BCL104
|
4.4
|
41.1
|
1.0
|
CG
|
I:HIS36
|
4.7
|
38.7
|
1.0
|
CAB
|
J:BCL101
|
4.8
|
39.6
|
1.0
|
C2B
|
J:BCL101
|
4.8
|
39.6
|
1.0
|
ND1
|
I:HIS36
|
4.9
|
38.7
|
1.0
|
CBD
|
G:BCL104
|
4.9
|
41.1
|
1.0
|
CMD
|
G:BCL103
|
5.0
|
39.8
|
1.0
|
|
Magnesium binding site 7 out
of 36 in 6z5r
Go back to
Magnesium Binding Sites List in 6z5r
Magnesium binding site 7 out
of 36 in the Rc-LH1(16) Complex From Rhodopseudomonas Palustris
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 7 of Rc-LH1(16) Complex From Rhodopseudomonas Palustris within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
J:Mg101
b:39.6
occ:1.00
|
MG
|
J:BCL101
|
0.0
|
39.6
|
1.0
|
NC
|
J:BCL101
|
2.0
|
39.6
|
1.0
|
NA
|
J:BCL101
|
2.0
|
39.6
|
1.0
|
ND
|
J:BCL101
|
2.0
|
39.6
|
1.0
|
NB
|
J:BCL101
|
2.1
|
39.6
|
1.0
|
C4D
|
J:BCL101
|
3.0
|
39.6
|
1.0
|
NE2
|
J:HIS29
|
3.0
|
36.6
|
1.0
|
C1A
|
J:BCL101
|
3.0
|
39.6
|
1.0
|
C4A
|
J:BCL101
|
3.0
|
39.6
|
1.0
|
C4C
|
J:BCL101
|
3.0
|
39.6
|
1.0
|
C1C
|
J:BCL101
|
3.0
|
39.6
|
1.0
|
C1B
|
J:BCL101
|
3.1
|
39.6
|
1.0
|
C4B
|
J:BCL101
|
3.1
|
39.6
|
1.0
|
C1D
|
J:BCL101
|
3.2
|
39.6
|
1.0
|
CHB
|
J:BCL101
|
3.4
|
39.6
|
1.0
|
CHC
|
J:BCL101
|
3.4
|
39.6
|
1.0
|
CHA
|
J:BCL101
|
3.4
|
39.6
|
1.0
|
CHD
|
J:BCL101
|
3.5
|
39.6
|
1.0
|
CE1
|
J:HIS29
|
3.7
|
36.6
|
1.0
|
CBB
|
G:BCL104
|
4.0
|
41.1
|
1.0
|
CMB
|
G:BCL104
|
4.1
|
41.1
|
1.0
|
CD2
|
J:HIS29
|
4.1
|
36.6
|
1.0
|
C3D
|
J:BCL101
|
4.2
|
39.6
|
1.0
|
C3A
|
J:BCL101
|
4.3
|
39.6
|
1.0
|
C2A
|
J:BCL101
|
4.3
|
39.6
|
1.0
|
C3C
|
J:BCL101
|
4.3
|
39.6
|
1.0
|
C2C
|
J:BCL101
|
4.3
|
39.6
|
1.0
|
C3B
|
J:BCL101
|
4.4
|
39.6
|
1.0
|
C2B
|
J:BCL101
|
4.4
|
39.6
|
1.0
|
C2D
|
J:BCL101
|
4.4
|
39.6
|
1.0
|
C2B
|
G:BCL104
|
4.7
|
41.1
|
1.0
|
CAB
|
G:BCL104
|
4.8
|
41.1
|
1.0
|
CBD
|
J:BCL101
|
4.9
|
39.6
|
1.0
|
ND1
|
J:HIS29
|
4.9
|
36.6
|
1.0
|
C3B
|
G:BCL104
|
5.0
|
41.1
|
1.0
|
CMA
|
J:BCL101
|
5.0
|
39.6
|
1.0
|
CAA
|
J:BCL101
|
5.0
|
39.6
|
1.0
|
|
Magnesium binding site 8 out
of 36 in 6z5r
Go back to
Magnesium Binding Sites List in 6z5r
Magnesium binding site 8 out
of 36 in the Rc-LH1(16) Complex From Rhodopseudomonas Palustris
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 8 of Rc-LH1(16) Complex From Rhodopseudomonas Palustris within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
J:Mg103
b:43.6
occ:1.00
|
MG
|
J:BCL103
|
0.0
|
43.6
|
1.0
|
NC
|
J:BCL103
|
2.0
|
43.6
|
1.0
|
NA
|
J:BCL103
|
2.0
|
43.6
|
1.0
|
ND
|
J:BCL103
|
2.0
|
43.6
|
1.0
|
NB
|
J:BCL103
|
2.0
|
43.6
|
1.0
|
NE2
|
K:HIS36
|
2.8
|
39.8
|
1.0
|
C4D
|
J:BCL103
|
2.9
|
43.6
|
1.0
|
C4A
|
J:BCL103
|
3.0
|
43.6
|
1.0
|
C4C
|
J:BCL103
|
3.0
|
43.6
|
1.0
|
C1A
|
J:BCL103
|
3.0
|
43.6
|
1.0
|
C1C
|
J:BCL103
|
3.0
|
43.6
|
1.0
|
C1B
|
J:BCL103
|
3.1
|
43.6
|
1.0
|
C4B
|
J:BCL103
|
3.1
|
43.6
|
1.0
|
C1D
|
J:BCL103
|
3.2
|
43.6
|
1.0
|
CD2
|
K:HIS36
|
3.3
|
39.8
|
1.0
|
CHB
|
J:BCL103
|
3.4
|
43.6
|
1.0
|
CHC
|
J:BCL103
|
3.4
|
43.6
|
1.0
|
CHA
|
J:BCL103
|
3.4
|
43.6
|
1.0
|
CHD
|
J:BCL103
|
3.5
|
43.6
|
1.0
|
CBB
|
N:BCL101
|
3.9
|
42.8
|
1.0
|
CE1
|
K:HIS36
|
4.0
|
39.8
|
1.0
|
C3D
|
J:BCL103
|
4.2
|
43.6
|
1.0
|
C2A
|
J:BCL103
|
4.3
|
43.6
|
1.0
|
C3A
|
J:BCL103
|
4.3
|
43.6
|
1.0
|
C3C
|
J:BCL103
|
4.3
|
43.6
|
1.0
|
C2C
|
J:BCL103
|
4.3
|
43.6
|
1.0
|
C3B
|
J:BCL103
|
4.4
|
43.6
|
1.0
|
C2B
|
J:BCL103
|
4.4
|
43.6
|
1.0
|
C2D
|
J:BCL103
|
4.4
|
43.6
|
1.0
|
CMB
|
N:BCL101
|
4.5
|
42.8
|
1.0
|
CG
|
K:HIS36
|
4.6
|
39.8
|
1.0
|
CAB
|
N:BCL101
|
4.8
|
42.8
|
1.0
|
CBD
|
J:BCL103
|
4.9
|
43.6
|
1.0
|
ND1
|
K:HIS36
|
4.9
|
39.8
|
1.0
|
C2B
|
N:BCL101
|
4.9
|
42.8
|
1.0
|
|
Magnesium binding site 9 out
of 36 in 6z5r
Go back to
Magnesium Binding Sites List in 6z5r
Magnesium binding site 9 out
of 36 in the Rc-LH1(16) Complex From Rhodopseudomonas Palustris
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 9 of Rc-LH1(16) Complex From Rhodopseudomonas Palustris within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
N:Mg101
b:42.8
occ:1.00
|
MG
|
N:BCL101
|
0.0
|
42.8
|
1.0
|
NC
|
N:BCL101
|
2.0
|
42.8
|
1.0
|
NA
|
N:BCL101
|
2.0
|
42.8
|
1.0
|
ND
|
N:BCL101
|
2.0
|
42.8
|
1.0
|
NB
|
N:BCL101
|
2.0
|
42.8
|
1.0
|
C4D
|
N:BCL101
|
3.0
|
42.8
|
1.0
|
C4C
|
N:BCL101
|
3.0
|
42.8
|
1.0
|
C4A
|
N:BCL101
|
3.0
|
42.8
|
1.0
|
C1A
|
N:BCL101
|
3.0
|
42.8
|
1.0
|
C1C
|
N:BCL101
|
3.0
|
42.8
|
1.0
|
NE2
|
N:HIS29
|
3.0
|
37.6
|
1.0
|
C1B
|
N:BCL101
|
3.1
|
42.8
|
1.0
|
C4B
|
N:BCL101
|
3.1
|
42.8
|
1.0
|
C1D
|
N:BCL101
|
3.2
|
42.8
|
1.0
|
CHB
|
N:BCL101
|
3.4
|
42.8
|
1.0
|
CHC
|
N:BCL101
|
3.4
|
42.8
|
1.0
|
CHA
|
N:BCL101
|
3.4
|
42.8
|
1.0
|
CHD
|
N:BCL101
|
3.5
|
42.8
|
1.0
|
C9
|
O:LMT101
|
3.6
|
56.0
|
1.0
|
C10
|
O:LMT101
|
3.6
|
56.0
|
1.0
|
CBB
|
J:BCL103
|
3.9
|
43.6
|
1.0
|
CE1
|
N:HIS29
|
3.9
|
37.6
|
1.0
|
CD2
|
N:HIS29
|
4.0
|
37.6
|
1.0
|
C3D
|
N:BCL101
|
4.2
|
42.8
|
1.0
|
CMB
|
J:BCL103
|
4.3
|
43.6
|
1.0
|
C3A
|
N:BCL101
|
4.3
|
42.8
|
1.0
|
C3C
|
N:BCL101
|
4.3
|
42.8
|
1.0
|
C2A
|
N:BCL101
|
4.3
|
42.8
|
1.0
|
C2C
|
N:BCL101
|
4.3
|
42.8
|
1.0
|
C3B
|
N:BCL101
|
4.4
|
42.8
|
1.0
|
C2B
|
N:BCL101
|
4.4
|
42.8
|
1.0
|
C2D
|
N:BCL101
|
4.4
|
42.8
|
1.0
|
C2B
|
J:BCL103
|
4.8
|
43.6
|
1.0
|
CAB
|
J:BCL103
|
4.9
|
43.6
|
1.0
|
C8
|
O:LMT101
|
4.9
|
56.0
|
1.0
|
CBD
|
N:BCL101
|
4.9
|
42.8
|
1.0
|
CMA
|
N:BCL101
|
4.9
|
42.8
|
1.0
|
|
Magnesium binding site 10 out
of 36 in 6z5r
Go back to
Magnesium Binding Sites List in 6z5r
Magnesium binding site 10 out
of 36 in the Rc-LH1(16) Complex From Rhodopseudomonas Palustris
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 10 of Rc-LH1(16) Complex From Rhodopseudomonas Palustris within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
N:Mg102
b:45.1
occ:1.00
|
MG
|
N:BCL102
|
0.0
|
45.1
|
1.0
|
NA
|
N:BCL102
|
2.0
|
45.1
|
1.0
|
NC
|
N:BCL102
|
2.0
|
45.1
|
1.0
|
ND
|
N:BCL102
|
2.0
|
45.1
|
1.0
|
NB
|
N:BCL102
|
2.0
|
45.1
|
1.0
|
NE2
|
O:HIS36
|
2.7
|
42.2
|
1.0
|
C4D
|
N:BCL102
|
2.9
|
45.1
|
1.0
|
C1A
|
N:BCL102
|
3.0
|
45.1
|
1.0
|
C4A
|
N:BCL102
|
3.0
|
45.1
|
1.0
|
C4C
|
N:BCL102
|
3.0
|
45.1
|
1.0
|
C1C
|
N:BCL102
|
3.0
|
45.1
|
1.0
|
C1B
|
N:BCL102
|
3.1
|
45.1
|
1.0
|
C4B
|
N:BCL102
|
3.1
|
45.1
|
1.0
|
C1D
|
N:BCL102
|
3.2
|
45.1
|
1.0
|
CHB
|
N:BCL102
|
3.4
|
45.1
|
1.0
|
CHC
|
N:BCL102
|
3.4
|
45.1
|
1.0
|
CHA
|
N:BCL102
|
3.4
|
45.1
|
1.0
|
CHD
|
N:BCL102
|
3.5
|
45.1
|
1.0
|
CE1
|
O:HIS36
|
3.6
|
42.2
|
1.0
|
CD2
|
O:HIS36
|
3.7
|
42.2
|
1.0
|
CBB
|
P:BCL102
|
3.8
|
42.6
|
1.0
|
C3D
|
N:BCL102
|
4.2
|
45.1
|
1.0
|
CMB
|
P:BCL102
|
4.2
|
42.6
|
1.0
|
C2A
|
N:BCL102
|
4.3
|
45.1
|
1.0
|
C3A
|
N:BCL102
|
4.3
|
45.1
|
1.0
|
C3C
|
N:BCL102
|
4.3
|
45.1
|
1.0
|
C2C
|
N:BCL102
|
4.3
|
45.1
|
1.0
|
C3B
|
N:BCL102
|
4.4
|
45.1
|
1.0
|
C2B
|
N:BCL102
|
4.4
|
45.1
|
1.0
|
C2D
|
N:BCL102
|
4.4
|
45.1
|
1.0
|
CAB
|
P:BCL102
|
4.4
|
42.6
|
1.0
|
C2B
|
P:BCL102
|
4.7
|
42.6
|
1.0
|
C3B
|
P:BCL102
|
4.7
|
42.6
|
1.0
|
ND1
|
O:HIS36
|
4.7
|
42.2
|
1.0
|
CG
|
O:HIS36
|
4.8
|
42.2
|
1.0
|
CBD
|
N:BCL102
|
4.9
|
45.1
|
1.0
|
CD1
|
N:ILE28
|
4.9
|
38.6
|
1.0
|
C42
|
O:6PL103
|
4.9
|
60.0
|
1.0
|
CMD
|
N:BCL101
|
4.9
|
42.8
|
1.0
|
CAA
|
N:BCL102
|
5.0
|
45.1
|
1.0
|
|
Reference:
D.J.K.Swainsbury,
P.Qian,
P.J.Jackson,
K.M.Faries,
D.M.Niedzwiedzki,
E.C.Martin,
D.A.Farmer,
L.A.Malone,
R.F.Thompson,
N.A.Ranson,
D.P.Canniffe,
M.J.Dickman,
D.Holten,
C.Kirmaier,
A.Hitchcock,
C.N.Hunter.
Structures of Rhodopseudomonas Palustris Rc-LH1 Complexes with Open or Closed Quinone Channels. Sci Adv 2021.
ISSN: ESSN 2375-2548
DOI: 10.1126/SCIADV.ABE2631
Page generated: Wed Oct 2 02:04:34 2024
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