Magnesium in PDB 6z6u: 1.25 A Structure of Human Apoferritin Obtained From Titan Mono-Bcor Microscope
Enzymatic activity of 1.25 A Structure of Human Apoferritin Obtained From Titan Mono-Bcor Microscope
All present enzymatic activity of 1.25 A Structure of Human Apoferritin Obtained From Titan Mono-Bcor Microscope:
1.16.3.1;
Other elements in 6z6u:
The structure of 1.25 A Structure of Human Apoferritin Obtained From Titan Mono-Bcor Microscope also contains other interesting chemical elements:
Magnesium Binding Sites:
The binding sites of Magnesium atom in the 1.25 A Structure of Human Apoferritin Obtained From Titan Mono-Bcor Microscope
(pdb code 6z6u). This binding sites where shown within
5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the
1.25 A Structure of Human Apoferritin Obtained From Titan Mono-Bcor Microscope, PDB code: 6z6u:
Jump to Magnesium binding site number:
1;
2;
Magnesium binding site 1 out
of 2 in 6z6u
Go back to
Magnesium Binding Sites List in 6z6u
Magnesium binding site 1 out
of 2 in the 1.25 A Structure of Human Apoferritin Obtained From Titan Mono-Bcor Microscope
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 1 of 1.25 A Structure of Human Apoferritin Obtained From Titan Mono-Bcor Microscope within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
a:Mg202
b:51.7
occ:1.00
|
OE2
|
M:GLU134
|
2.4
|
35.6
|
1.0
|
OE2
|
Q:GLU134
|
2.4
|
35.6
|
1.0
|
OE2
|
a:GLU134
|
2.4
|
35.6
|
1.0
|
OD1
|
Q:ASP131
|
3.3
|
43.4
|
1.0
|
OD1
|
M:ASP131
|
3.3
|
43.4
|
1.0
|
OD1
|
a:ASP131
|
3.3
|
43.4
|
1.0
|
CD
|
M:GLU134
|
3.7
|
34.3
|
1.0
|
CD
|
Q:GLU134
|
3.7
|
34.3
|
1.0
|
CD
|
a:GLU134
|
3.7
|
34.3
|
1.0
|
HA
|
Q:ASP131
|
4.1
|
21.5
|
1.0
|
HA
|
M:ASP131
|
4.1
|
21.5
|
1.0
|
HA
|
a:ASP131
|
4.1
|
21.5
|
1.0
|
OE1
|
M:GLU134
|
4.2
|
40.6
|
1.0
|
OE1
|
Q:GLU134
|
4.2
|
40.6
|
1.0
|
OE1
|
a:GLU134
|
4.2
|
40.6
|
1.0
|
HB2
|
M:GLU134
|
4.3
|
31.7
|
1.0
|
HB2
|
Q:GLU134
|
4.3
|
31.7
|
1.0
|
HB2
|
a:GLU134
|
4.3
|
31.7
|
1.0
|
CG
|
Q:ASP131
|
4.4
|
34.0
|
1.0
|
CG
|
M:ASP131
|
4.4
|
34.0
|
1.0
|
CG
|
a:ASP131
|
4.4
|
34.0
|
1.0
|
HB2
|
Q:ASP131
|
4.4
|
25.5
|
1.0
|
HB2
|
M:ASP131
|
4.4
|
25.5
|
1.0
|
HB2
|
a:ASP131
|
4.4
|
25.5
|
1.0
|
HB3
|
M:GLU134
|
4.5
|
31.7
|
1.0
|
HB3
|
Q:GLU134
|
4.5
|
31.7
|
1.0
|
HB3
|
a:GLU134
|
4.5
|
31.7
|
1.0
|
CB
|
M:GLU134
|
4.8
|
31.7
|
1.0
|
CB
|
Q:GLU134
|
4.8
|
31.7
|
1.0
|
CB
|
a:GLU134
|
4.8
|
31.7
|
1.0
|
CB
|
Q:ASP131
|
4.8
|
25.5
|
1.0
|
CB
|
M:ASP131
|
4.8
|
25.5
|
1.0
|
CB
|
a:ASP131
|
4.8
|
25.5
|
1.0
|
CG
|
M:GLU134
|
4.8
|
32.9
|
1.0
|
CG
|
Q:GLU134
|
4.8
|
32.9
|
1.0
|
CG
|
a:GLU134
|
4.8
|
32.9
|
1.0
|
CA
|
Q:ASP131
|
5.0
|
21.5
|
1.0
|
CA
|
M:ASP131
|
5.0
|
21.5
|
1.0
|
CA
|
a:ASP131
|
5.0
|
21.5
|
1.0
|
|
Magnesium binding site 2 out
of 2 in 6z6u
Go back to
Magnesium Binding Sites List in 6z6u
Magnesium binding site 2 out
of 2 in the 1.25 A Structure of Human Apoferritin Obtained From Titan Mono-Bcor Microscope
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 2 of 1.25 A Structure of Human Apoferritin Obtained From Titan Mono-Bcor Microscope within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
G:Mg202
b:51.7
occ:1.00
|
OE2
|
W:GLU134
|
2.4
|
35.6
|
1.0
|
OE2
|
G:GLU134
|
2.4
|
35.6
|
1.0
|
OE2
|
6:GLU134
|
2.4
|
35.6
|
1.0
|
OD1
|
G:ASP131
|
3.3
|
43.4
|
1.0
|
OD1
|
W:ASP131
|
3.3
|
43.4
|
1.0
|
OD1
|
6:ASP131
|
3.3
|
43.4
|
1.0
|
CD
|
W:GLU134
|
3.7
|
34.3
|
1.0
|
CD
|
G:GLU134
|
3.7
|
34.3
|
1.0
|
CD
|
6:GLU134
|
3.7
|
34.3
|
1.0
|
HA
|
G:ASP131
|
4.1
|
21.5
|
1.0
|
HA
|
W:ASP131
|
4.1
|
21.5
|
1.0
|
HA
|
6:ASP131
|
4.1
|
21.5
|
1.0
|
OE1
|
W:GLU134
|
4.2
|
40.6
|
1.0
|
OE1
|
G:GLU134
|
4.2
|
40.6
|
1.0
|
OE1
|
6:GLU134
|
4.2
|
40.6
|
1.0
|
HB2
|
W:GLU134
|
4.3
|
31.7
|
1.0
|
HB2
|
G:GLU134
|
4.3
|
31.7
|
1.0
|
HB2
|
6:GLU134
|
4.3
|
31.7
|
1.0
|
CG
|
G:ASP131
|
4.4
|
34.0
|
1.0
|
CG
|
W:ASP131
|
4.4
|
34.0
|
1.0
|
CG
|
6:ASP131
|
4.4
|
34.0
|
1.0
|
HB2
|
G:ASP131
|
4.4
|
25.5
|
1.0
|
HB2
|
W:ASP131
|
4.4
|
25.5
|
1.0
|
HB2
|
6:ASP131
|
4.4
|
25.5
|
1.0
|
HB3
|
W:GLU134
|
4.5
|
31.7
|
1.0
|
HB3
|
G:GLU134
|
4.5
|
31.7
|
1.0
|
HB3
|
6:GLU134
|
4.5
|
31.7
|
1.0
|
CB
|
W:GLU134
|
4.8
|
31.7
|
1.0
|
CB
|
G:GLU134
|
4.8
|
31.7
|
1.0
|
CB
|
6:GLU134
|
4.8
|
31.7
|
1.0
|
CB
|
G:ASP131
|
4.8
|
25.5
|
1.0
|
CB
|
W:ASP131
|
4.8
|
25.5
|
1.0
|
CB
|
6:ASP131
|
4.8
|
25.5
|
1.0
|
CG
|
W:GLU134
|
4.8
|
32.9
|
1.0
|
CG
|
G:GLU134
|
4.8
|
32.9
|
1.0
|
CG
|
6:GLU134
|
4.8
|
32.9
|
1.0
|
CA
|
G:ASP131
|
5.0
|
21.5
|
1.0
|
CA
|
W:ASP131
|
5.0
|
21.5
|
1.0
|
CA
|
6:ASP131
|
5.0
|
21.5
|
1.0
|
|
Reference:
K.M.Yip,
N.Fischer,
E.Paknia,
A.Chari,
H.Stark.
1.25 A Structure of Human Apoferritin Obtained From Titan Mono-Bcor Microscope To Be Published.
Page generated: Tue Dec 15 02:54:49 2020
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