Magnesium in PDB 6z8i: Fructo-Oligosaccharide Transporter Bt 1762-63

The structure of Fructo-Oligosaccharide Transporter Bt 1762-63, PDB code: 6z8i was solved by B.Van Den Berg, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	85.63 / 2.62
Space group	C 2 2 21
Cell size a, b, c (Å), α, β, γ (°)	115.709, 232.746, 171.252, 90.00, 90.00, 90.00
R / Rfree (%)	21.8 / 27.5

The binding sites of Magnesium atom in the Fructo-Oligosaccharide Transporter Bt 1762-63 (pdb code 6z8i). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Fructo-Oligosaccharide Transporter Bt 1762-63, PDB code: 6z8i:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Fructo-Oligosaccharide Transporter Bt 1762-63


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Fructo-Oligosaccharide Transporter Bt 1762-63 within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg601 b:77.4 occ:1.00 OD1 B:ASN664 2.0 89.0 1.0 OD1 A:ASN401 2.1 0.7 1.0 O A:TYR273 2.1 89.6 1.0 O A:SER399 2.5 30.4 1.0 OE2 A:GLU262 2.6 64.6 1.0 OE1 A:GLU262 2.9 52.0 1.0 CD A:GLU262 3.1 51.7 1.0 CG B:ASN664 3.2 54.1 1.0 CG A:ASN401 3.3 61.5 1.0 C A:TYR273 3.3 33.8 1.0 C A:SER399 3.8 38.1 1.0 N A:TYR273 4.0 34.5 1.0 N A:ASN401 4.0 40.9 1.0 CB B:ASN664 4.0 28.7 1.0 ND2 A:ASN401 4.0 46.8 1.0 CA A:TYR273 4.1 34.3 1.0 ND2 B:ASN664 4.2 41.9 1.0 C A:GLN272 4.2 34.8 1.0 CA B:ASN664 4.2 30.0 1.0 N A:SER274 4.4 44.2 1.0 CB A:SER399 4.4 41.0 1.0 CB A:ASN401 4.4 31.5 1.0 CA A:ASN401 4.4 40.1 1.0 OG A:SER399 4.4 50.1 1.0 CG A:GLU262 4.5 39.8 1.0 O B:HOH1212 4.5 46.8 1.0 CA A:GLN272 4.5 40.8 1.0 CA A:SER274 4.5 44.9 1.0 CB A:TYR273 4.6 41.4 1.0 CA A:SER399 4.6 41.4 1.0 C A:LEU400 4.6 36.7 1.0 OD1 B:ASP659 4.6 45.2 1.0 OE1 A:GLN272 4.6 53.4 1.0 O A:GLN272 4.7 38.6 1.0 N A:LEU400 4.7 30.4 1.0 CA A:LEU400 4.9 35.2 1.0

Magnesium binding site 2 out of 2 in the Fructo-Oligosaccharide Transporter Bt 1762-63


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Fructo-Oligosaccharide Transporter Bt 1762-63 within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg1101 b:48.4 occ:1.00 OD1 B:ASN841 2.2 83.8 1.0 OD1 B:ASP839 2.2 73.6 1.0 OD2 B:ASP848 2.3 69.8 1.0 OD1 B:ASP848 2.5 69.7 1.0 O B:VAL843 2.6 60.9 1.0 CG B:ASP848 2.7 70.7 1.0 CG B:ASN841 2.7 70.9 1.0 ND2 B:ASN841 2.7 70.8 1.0 OD1 B:ASP837 2.7 62.0 1.0 CG B:ASP839 3.0 71.0 1.0 OD2 B:ASP839 3.2 74.4 1.0 C B:VAL843 3.8 63.8 1.0 OD2 B:ASP845 3.9 74.9 1.0 CG B:ASP837 4.0 65.1 1.0 CB B:ASN841 4.1 62.8 1.0 CB B:ASP848 4.2 62.6 1.0 N B:ASN841 4.3 71.3 1.0 CB B:ASP839 4.4 62.8 1.0 N B:ASP839 4.6 60.1 1.0 N B:VAL843 4.6 65.0 1.0 N B:ASP845 4.6 58.6 1.0 CA B:ILE844 4.7 57.8 1.0 N B:ILE844 4.7 61.6 1.0 N B:ASP848 4.7 60.2 1.0 CG2 B:VAL843 4.7 60.5 1.0 N B:HIS840 4.7 69.0 1.0 CA B:ASN841 4.7 64.2 1.0 CA B:ASP848 4.7 59.5 1.0 OD2 B:ASP837 4.8 61.7 1.0 CA B:VAL843 4.8 62.9 1.0 CG B:ASP845 4.8 68.4 1.0 CA B:ASP837 4.8 62.5 1.0 CA B:ASP839 4.9 57.7 1.0 N B:ILE838 4.9 69.3 1.0 C B:ASP837 5.0 64.2 1.0 C B:ASP839 5.0 64.1 1.0 CB B:ASP837 5.0 61.4 1.0

B.Van Den Berg, B.Van Den Berg. N/A N/A.