Atomistry » Magnesium » PDB 6z9a-6zid » 6zi5
Atomistry »
  Magnesium »
    PDB 6z9a-6zid »
      6zi5 »

Magnesium in PDB 6zi5: Ultrafast Structural Response to Charge Redistribution Within A Photosynthetic Reaction Centre - 300 Ps (A) Structure

Protein crystallography data

The structure of Ultrafast Structural Response to Charge Redistribution Within A Photosynthetic Reaction Centre - 300 Ps (A) Structure, PDB code: 6zi5 was solved by P.Baath, R.Dods, G.Braenden, R.Neutze, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 37.75 / 2.80
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 226.400, 226.400, 113.700, 90.00, 90.00, 90.00
R / Rfree (%) 17.6 / 20.2

Other elements in 6zi5:

The structure of Ultrafast Structural Response to Charge Redistribution Within A Photosynthetic Reaction Centre - 300 Ps (A) Structure also contains other interesting chemical elements:

Iron (Fe) 6 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Ultrafast Structural Response to Charge Redistribution Within A Photosynthetic Reaction Centre - 300 Ps (A) Structure (pdb code 6zi5). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 7 binding sites of Magnesium where determined in the Ultrafast Structural Response to Charge Redistribution Within A Photosynthetic Reaction Centre - 300 Ps (A) Structure, PDB code: 6zi5:
Jump to Magnesium binding site number: 1; 2; 3; 4; 5; 6; 7;

Magnesium binding site 1 out of 7 in 6zi5

Go back to Magnesium Binding Sites List in 6zi5
Magnesium binding site 1 out of 7 in the Ultrafast Structural Response to Charge Redistribution Within A Photosynthetic Reaction Centre - 300 Ps (A) Structure


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Ultrafast Structural Response to Charge Redistribution Within A Photosynthetic Reaction Centre - 300 Ps (A) Structure within 5.0Å range:
probe atom residue distance (Å) B Occ
L:Mg301

b:72.8
occ:0.70
MG L:BCB301 0.0 72.8 0.7
MG L:BCB301 0.3 72.8 0.3
NA L:BCB301 1.8 73.1 0.3
ND L:BCB301 1.8 70.0 0.3
NA L:BCB301 2.0 73.1 0.7
ND L:BCB301 2.0 70.0 0.7
NB L:BCB301 2.0 70.1 0.7
NC L:BCB301 2.1 70.1 0.7
NE2 L:HIS173 2.2 73.8 0.7
NC L:BCB301 2.2 70.1 0.3
NB L:BCB301 2.3 70.1 0.3
NE2 L:HIS173 2.5 73.8 0.3
C1A L:BCB301 2.7 72.2 0.3
C4D L:BCB301 2.7 70.9 0.3
C4A L:BCB301 2.9 73.7 0.3
C1A L:BCB301 3.0 72.2 0.7
C4A L:BCB301 3.0 73.7 0.7
C1D L:BCB301 3.0 71.5 0.3
C4D L:BCB301 3.0 70.9 0.7
C1B L:BCB301 3.1 69.8 0.7
C4B L:BCB301 3.1 69.0 0.7
C4C L:BCB301 3.1 69.6 0.7
C1D L:BCB301 3.1 71.5 0.7
CHA L:BCB301 3.1 72.9 0.3
C1C L:BCB301 3.1 71.8 0.7
CE1 L:HIS173 3.2 85.8 0.7
CD2 L:HIS173 3.2 76.1 0.7
CD2 L:HIS173 3.2 76.1 0.3
C4C L:BCB301 3.2 69.6 0.3
C1B L:BCB301 3.2 69.8 0.3
C1C L:BCB301 3.4 71.8 0.3
C4B L:BCB301 3.4 69.0 0.3
CHB L:BCB301 3.4 68.1 0.7
CHA L:BCB301 3.4 72.9 0.7
CBB M:BCB404 3.4 73.3 0.7
CHB L:BCB301 3.4 68.1 0.3
OBB M:BCB404 3.4 78.8 0.3
CHC L:BCB301 3.5 66.4 0.7
CAB M:BCB404 3.5 72.7 0.7
CAB M:BCB404 3.5 72.7 0.3
CBB M:BCB404 3.6 73.3 0.3
CHD L:BCB301 3.6 69.1 0.7
CHD L:BCB301 3.6 69.1 0.3
OBB M:BCB404 3.6 78.8 0.7
CE1 L:HIS173 3.6 85.8 0.3
CHC L:BCB301 3.7 66.4 0.3
C3D L:BCB301 4.1 71.3 0.3
C2A L:BCB301 4.1 70.4 0.3
C2D L:BCB301 4.2 76.8 0.3
C3A L:BCB301 4.2 70.7 0.3
CD1 L:TRP167 4.2 78.7 0.3
NE1 L:TRP167 4.2 74.5 0.3
C3B M:BCB404 4.2 72.1 0.7
ND1 L:HIS173 4.3 82.1 0.7
C3D L:BCB301 4.3 71.3 0.7
C2A L:BCB301 4.3 70.4 0.7
CG L:HIS173 4.3 77.1 0.7
C3A L:BCB301 4.3 70.7 0.7
CD1 L:TRP167 4.3 78.7 0.7
C2D L:BCB301 4.3 76.8 0.7
C3C L:BCB301 4.4 68.6 0.7
NE1 L:TRP167 4.4 74.5 0.7
C3B M:BCB404 4.4 72.1 0.3
C3B L:BCB301 4.4 67.9 0.7
C2B L:BCB301 4.4 73.3 0.7
CG L:HIS173 4.5 77.1 0.3
C3C L:BCB301 4.5 68.6 0.3
C2C L:BCB301 4.5 71.7 0.7
CBD L:BCB301 4.6 75.7 0.3
C2B L:BCB301 4.6 73.3 0.3
ND1 L:HIS173 4.6 82.1 0.3
C3B L:BCB301 4.6 67.9 0.3
C2C L:BCB301 4.7 71.7 0.3
CBD L:BCB301 4.9 75.7 0.7
CAD L:BCB301 4.9 73.6 0.3
C2B M:BCB404 5.0 67.8 0.7

Magnesium binding site 2 out of 7 in 6zi5

Go back to Magnesium Binding Sites List in 6zi5
Magnesium binding site 2 out of 7 in the Ultrafast Structural Response to Charge Redistribution Within A Photosynthetic Reaction Centre - 300 Ps (A) Structure


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Ultrafast Structural Response to Charge Redistribution Within A Photosynthetic Reaction Centre - 300 Ps (A) Structure within 5.0Å range:
probe atom residue distance (Å) B Occ
L:Mg301

b:72.8
occ:0.30
MG L:BCB301 0.0 72.8 0.3
MG L:BCB301 0.3 72.8 0.7
NB L:BCB301 1.8 70.1 0.7
NC L:BCB301 1.9 70.1 0.7
NA L:BCB301 2.0 73.1 0.3
ND L:BCB301 2.0 70.0 0.3
NC L:BCB301 2.1 70.1 0.3
NB L:BCB301 2.1 70.1 0.3
NA L:BCB301 2.2 73.1 0.7
NE2 L:HIS173 2.2 73.8 0.7
ND L:BCB301 2.3 70.0 0.7
NE2 L:HIS173 2.5 73.8 0.3
C4B L:BCB301 2.8 69.0 0.7
C1C L:BCB301 2.9 71.8 0.7
C1B L:BCB301 2.9 69.8 0.7
C1A L:BCB301 3.0 72.2 0.3
C4A L:BCB301 3.0 73.7 0.3
C4C L:BCB301 3.0 69.6 0.7
C4D L:BCB301 3.0 70.9 0.3
C1B L:BCB301 3.1 69.8 0.3
C4B L:BCB301 3.1 69.0 0.3
C4A L:BCB301 3.1 73.7 0.7
C4C L:BCB301 3.1 69.6 0.3
C1C L:BCB301 3.1 71.8 0.3
CE1 L:HIS173 3.1 85.8 0.7
C1D L:BCB301 3.1 71.5 0.3
CHC L:BCB301 3.2 66.4 0.7
C1A L:BCB301 3.2 72.2 0.7
C1D L:BCB301 3.3 71.5 0.7
OBB M:BCB404 3.3 78.8 0.3
C4D L:BCB301 3.3 70.9 0.7
CD2 L:HIS173 3.3 76.1 0.3
CD2 L:HIS173 3.3 76.1 0.7
CAB M:BCB404 3.3 72.7 0.7
CAB M:BCB404 3.4 72.7 0.3
CHB L:BCB301 3.4 68.1 0.7
CHB L:BCB301 3.4 68.1 0.3
CBB M:BCB404 3.4 73.3 0.7
CHA L:BCB301 3.4 72.9 0.3
CHC L:BCB301 3.4 66.4 0.3
OBB M:BCB404 3.5 78.8 0.7
CBB M:BCB404 3.5 73.3 0.3
CHD L:BCB301 3.6 69.1 0.3
CE1 L:HIS173 3.6 85.8 0.3
CHD L:BCB301 3.6 69.1 0.7
CHA L:BCB301 3.7 72.9 0.7
C3B M:BCB404 4.0 72.1 0.7
C3B L:BCB301 4.1 67.9 0.7
C3B M:BCB404 4.2 72.1 0.3
C3C L:BCB301 4.2 68.6 0.7
C2B L:BCB301 4.2 73.3 0.7
ND1 L:HIS173 4.3 82.1 0.7
CD1 L:TRP167 4.3 78.7 0.3
C2A L:BCB301 4.3 70.4 0.3
C2C L:BCB301 4.3 71.7 0.7
C3D L:BCB301 4.3 71.3 0.3
C3A L:BCB301 4.3 70.7 0.3
C3C L:BCB301 4.3 68.6 0.3
C2D L:BCB301 4.4 76.8 0.3
NE1 L:TRP167 4.4 74.5 0.3
C3B L:BCB301 4.4 67.9 0.3
CD1 L:TRP167 4.4 78.7 0.7
CG L:HIS173 4.4 77.1 0.7
C2B L:BCB301 4.4 73.3 0.3
C3A L:BCB301 4.5 70.7 0.7
C2C L:BCB301 4.5 71.7 0.3
NE1 L:TRP167 4.5 74.5 0.7
C2D L:BCB301 4.5 76.8 0.7
CG L:HIS173 4.5 77.1 0.3
C2A L:BCB301 4.5 70.4 0.7
C3D L:BCB301 4.6 71.3 0.7
ND1 L:HIS173 4.6 82.1 0.3
C2B M:BCB404 4.8 67.8 0.7
C4B M:BCB404 4.8 69.7 0.7
CBD L:BCB301 4.9 75.7 0.3
C4B M:BCB404 4.9 69.7 0.3

Magnesium binding site 3 out of 7 in 6zi5

Go back to Magnesium Binding Sites List in 6zi5
Magnesium binding site 3 out of 7 in the Ultrafast Structural Response to Charge Redistribution Within A Photosynthetic Reaction Centre - 300 Ps (A) Structure


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of Ultrafast Structural Response to Charge Redistribution Within A Photosynthetic Reaction Centre - 300 Ps (A) Structure within 5.0Å range:
probe atom residue distance (Å) B Occ
L:Mg302

b:81.5
occ:0.70
MG L:BCB302 0.0 81.5 0.7
MG L:BCB302 0.2 81.5 0.3
NB L:BCB302 1.9 80.4 0.3
NC L:BCB302 2.0 77.3 0.3
NA L:BCB302 2.0 77.8 0.7
ND L:BCB302 2.0 79.2 0.7
NC L:BCB302 2.1 77.3 0.7
NB L:BCB302 2.1 80.4 0.7
NE2 L:HIS153 2.1 82.1 0.3
NA L:BCB302 2.1 77.8 0.3
NE2 L:HIS153 2.2 82.1 0.7
ND L:BCB302 2.3 79.2 0.3
CE1 L:HIS153 2.9 83.8 0.3
C4B L:BCB302 2.9 75.8 0.3
C1B L:BCB302 2.9 77.2 0.3
C1A L:BCB302 3.0 79.4 0.7
C1C L:BCB302 3.0 72.5 0.3
C4D L:BCB302 3.0 80.8 0.7
C4A L:BCB302 3.0 80.0 0.7
C4A L:BCB302 3.0 80.0 0.3
C1B L:BCB302 3.1 77.2 0.7
C4B L:BCB302 3.1 75.8 0.7
C4C L:BCB302 3.1 74.7 0.3
C4C L:BCB302 3.1 74.7 0.7
C1C L:BCB302 3.1 72.5 0.7
C1D L:BCB302 3.1 76.4 0.7
CD2 L:HIS153 3.1 83.5 0.7
C1A L:BCB302 3.2 79.4 0.3
CE1 L:HIS153 3.2 83.8 0.7
CD2 L:HIS153 3.2 83.5 0.3
C4D L:BCB302 3.2 80.8 0.3
CHC L:BCB302 3.3 72.7 0.3
C1D L:BCB302 3.3 76.4 0.3
CHB L:BCB302 3.3 75.9 0.3
CHA L:BCB302 3.4 78.7 0.7
CHB L:BCB302 3.4 75.9 0.7
CHC L:BCB302 3.5 72.7 0.7
CHD L:BCB302 3.6 75.3 0.7
CHA L:BCB302 3.6 78.7 0.3
CHD L:BCB302 3.6 75.3 0.3
ND1 L:HIS153 4.1 77.7 0.3
CBB L:BPB303 4.1 78.3 0.3
CBB L:BPB303 4.2 78.3 0.7
C3B L:BCB302 4.2 76.7 0.3
CG L:HIS153 4.2 80.1 0.3
C2B L:BCB302 4.2 74.2 0.3
C3C L:BCB302 4.3 77.5 0.3
ND1 L:HIS153 4.3 77.7 0.7
C3D L:BCB302 4.3 84.8 0.7
CG L:HIS153 4.3 80.1 0.7
C2A L:BCB302 4.3 79.6 0.7
C3A L:BCB302 4.3 76.8 0.7
C3C L:BCB302 4.3 77.5 0.7
C2C L:BCB302 4.3 75.5 0.3
C2D L:BCB302 4.3 82.0 0.7
C3A L:BCB302 4.4 76.8 0.3
C3B L:BCB302 4.4 76.7 0.7
C2B L:BCB302 4.4 74.2 0.7
C2A L:BCB302 4.5 79.6 0.3
C2C L:BCB302 4.5 75.5 0.7
CE2 M:TYR208 4.5 84.2 0.3
C3D L:BCB302 4.5 84.8 0.3
C2D L:BCB302 4.5 82.0 0.3
CE2 M:TYR208 4.6 84.2 0.7
CBD L:BCB302 4.8 80.4 0.7
CMC L:BCB302 4.9 73.1 0.3
CD2 L:LEU154 4.9 80.5 0.3
CBA L:BCB302 4.9 78.9 0.3
CMC L:BCB302 5.0 73.1 0.7
CMA L:BCB302 5.0 75.6 0.7
CMA L:BCB302 5.0 75.6 0.3
CD2 L:LEU154 5.0 80.5 0.7

Magnesium binding site 4 out of 7 in 6zi5

Go back to Magnesium Binding Sites List in 6zi5
Magnesium binding site 4 out of 7 in the Ultrafast Structural Response to Charge Redistribution Within A Photosynthetic Reaction Centre - 300 Ps (A) Structure


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 4 of Ultrafast Structural Response to Charge Redistribution Within A Photosynthetic Reaction Centre - 300 Ps (A) Structure within 5.0Å range:
probe atom residue distance (Å) B Occ
L:Mg302

b:81.5
occ:0.30
MG L:BCB302 0.0 81.5 0.3
MG L:BCB302 0.2 81.5 0.7
ND L:BCB302 1.8 79.2 0.7
NA L:BCB302 1.9 77.8 0.7
NA L:BCB302 2.0 77.8 0.3
ND L:BCB302 2.1 79.2 0.3
NC L:BCB302 2.1 77.3 0.3
NB L:BCB302 2.1 80.4 0.3
NC L:BCB302 2.2 77.3 0.7
NE2 L:HIS153 2.2 82.1 0.3
NB L:BCB302 2.3 80.4 0.7
NE2 L:HIS153 2.3 82.1 0.7
C4D L:BCB302 2.8 80.8 0.7
C1A L:BCB302 2.8 79.4 0.7
CE1 L:HIS153 3.0 83.8 0.3
C1A L:BCB302 3.0 79.4 0.3
C1D L:BCB302 3.0 76.4 0.7
C4A L:BCB302 3.0 80.0 0.3
C4A L:BCB302 3.0 80.0 0.7
C4D L:BCB302 3.0 80.8 0.3
C1B L:BCB302 3.1 77.2 0.3
C4C L:BCB302 3.1 74.7 0.3
C4B L:BCB302 3.1 75.8 0.3
C1C L:BCB302 3.1 72.5 0.3
C1D L:BCB302 3.1 76.4 0.3
C4C L:BCB302 3.1 74.7 0.7
CHA L:BCB302 3.2 78.7 0.7
CE1 L:HIS153 3.2 83.8 0.7
C1B L:BCB302 3.2 77.2 0.7
C1C L:BCB302 3.3 72.5 0.7
CD2 L:HIS153 3.3 83.5 0.7
C4B L:BCB302 3.3 75.8 0.7
CD2 L:HIS153 3.3 83.5 0.3
CHB L:BCB302 3.4 75.9 0.3
CHA L:BCB302 3.4 78.7 0.3
CHB L:BCB302 3.5 75.9 0.7
CHC L:BCB302 3.5 72.7 0.3
CHD L:BCB302 3.5 75.3 0.7
CHD L:BCB302 3.6 75.3 0.3
CHC L:BCB302 3.7 72.7 0.7
C3D L:BCB302 4.1 84.8 0.7
CBB L:BPB303 4.1 78.3 0.3
ND1 L:HIS153 4.2 77.7 0.3
C2D L:BCB302 4.2 82.0 0.7
C2A L:BCB302 4.2 79.6 0.7
CBB L:BPB303 4.2 78.3 0.7
C3A L:BCB302 4.3 76.8 0.7
CE2 M:TYR208 4.3 84.2 0.3
C3D L:BCB302 4.3 84.8 0.3
C3A L:BCB302 4.3 76.8 0.3
C2A L:BCB302 4.3 79.6 0.3
C3C L:BCB302 4.3 77.5 0.3
C2D L:BCB302 4.3 82.0 0.3
CG L:HIS153 4.4 80.1 0.3
ND1 L:HIS153 4.4 77.7 0.7
C3C L:BCB302 4.4 77.5 0.7
C2B L:BCB302 4.4 74.2 0.3
C3B L:BCB302 4.4 76.7 0.3
CE2 M:TYR208 4.4 84.2 0.7
CG L:HIS153 4.4 80.1 0.7
C2C L:BCB302 4.5 75.5 0.3
C2C L:BCB302 4.6 75.5 0.7
CBD L:BCB302 4.6 80.4 0.7
C2B L:BCB302 4.6 74.2 0.7
C3B L:BCB302 4.6 76.7 0.7
CBA L:BCB302 4.7 78.9 0.3
CD2 L:LEU154 4.8 80.5 0.3
CBD L:BCB302 4.9 80.4 0.3
CD2 L:LEU154 4.9 80.5 0.7
CBA L:BCB302 4.9 78.9 0.7
CAD L:BCB302 4.9 80.9 0.7
CMA L:BCB302 4.9 75.6 0.7
CMA L:BCB302 4.9 75.6 0.3

Magnesium binding site 5 out of 7 in 6zi5

Go back to Magnesium Binding Sites List in 6zi5
Magnesium binding site 5 out of 7 in the Ultrafast Structural Response to Charge Redistribution Within A Photosynthetic Reaction Centre - 300 Ps (A) Structure


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 5 of Ultrafast Structural Response to Charge Redistribution Within A Photosynthetic Reaction Centre - 300 Ps (A) Structure within 5.0Å range:
probe atom residue distance (Å) B Occ
M:Mg403

b:83.7
occ:1.00
MG M:BCB403 0.0 83.7 1.0
NA M:BCB403 2.0 85.8 1.0
NB M:BCB403 2.0 85.3 1.0
ND M:BCB403 2.0 79.0 1.0
NC M:BCB403 2.1 82.8 1.0
NE2 M:HIS180 2.1 79.0 1.0
C1A M:BCB403 3.0 82.1 1.0
C4A M:BCB403 3.0 84.4 1.0
C4D M:BCB403 3.0 77.1 1.0
CE1 M:HIS180 3.0 82.1 1.0
C4B M:BCB403 3.1 82.0 1.0
C1B M:BCB403 3.1 87.8 1.0
C4C M:BCB403 3.1 78.6 1.0
CD2 M:HIS180 3.1 85.3 1.0
C1D M:BCB403 3.1 81.8 1.0
C1C M:BCB403 3.1 75.1 1.0
CHB M:BCB403 3.4 84.0 1.0
CHA M:BCB403 3.4 79.3 1.0
CHC M:BCB403 3.5 80.0 1.0
CHD M:BCB403 3.6 79.7 1.0
ND1 M:HIS180 4.2 78.7 1.0
CG M:HIS180 4.2 82.6 1.0
C3D M:BCB403 4.3 77.5 1.0
C2A M:BCB403 4.3 81.2 1.0
C3A M:BCB403 4.3 83.4 1.0
C3C M:BCB403 4.3 78.4 1.0
C3B M:BCB403 4.4 88.4 1.0
C2D M:BCB403 4.4 80.8 1.0
C2B M:BCB403 4.4 85.0 1.0
OBB M:BPB405 4.5 88.1 1.0
C2C M:BCB403 4.5 75.3 1.0
CBA M:BCB403 4.8 83.9 1.0
CE2 L:PHE181 4.9 82.9 1.0
CBD M:BCB403 4.9 83.0 1.0

Magnesium binding site 6 out of 7 in 6zi5

Go back to Magnesium Binding Sites List in 6zi5
Magnesium binding site 6 out of 7 in the Ultrafast Structural Response to Charge Redistribution Within A Photosynthetic Reaction Centre - 300 Ps (A) Structure


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 6 of Ultrafast Structural Response to Charge Redistribution Within A Photosynthetic Reaction Centre - 300 Ps (A) Structure within 5.0Å range:
probe atom residue distance (Å) B Occ
M:Mg404

b:71.2
occ:0.70
MG M:BCB404 0.0 71.2 0.7
MG M:BCB404 0.3 71.2 0.3
NB M:BCB404 1.9 68.6 0.3
NC M:BCB404 1.9 65.7 0.3
NA M:BCB404 2.0 73.2 0.7
ND M:BCB404 2.0 68.9 0.7
NB M:BCB404 2.0 68.6 0.7
NC M:BCB404 2.0 65.7 0.7
NE2 M:HIS200 2.1 77.7 0.3
NE2 M:HIS200 2.1 77.7 0.7
NA M:BCB404 2.2 73.2 0.3
ND M:BCB404 2.3 68.9 0.3
C4B M:BCB404 2.8 69.7 0.3
C1C M:BCB404 2.9 70.9 0.3
CE1 M:HIS200 3.0 84.8 0.3
C1B M:BCB404 3.0 66.2 0.3
C1A M:BCB404 3.0 74.7 0.7
C4D M:BCB404 3.0 72.2 0.7
C4A M:BCB404 3.0 71.8 0.7
CE1 M:HIS200 3.0 84.8 0.7
C4C M:BCB404 3.0 70.0 0.3
C1B M:BCB404 3.1 66.2 0.7
C4B M:BCB404 3.1 69.7 0.7
C1C M:BCB404 3.1 70.9 0.7
C4A M:BCB404 3.1 71.8 0.3
C4C M:BCB404 3.1 70.0 0.7
C1D M:BCB404 3.1 72.3 0.7
CD2 M:HIS200 3.1 79.3 0.3
CHC M:BCB404 3.2 69.9 0.3
C1A M:BCB404 3.2 74.7 0.3
CD2 M:HIS200 3.2 79.3 0.7
C4D M:BCB404 3.2 72.2 0.3
C1D M:BCB404 3.3 72.3 0.3
CBB L:BCB301 3.3 69.7 0.7
CHA M:BCB404 3.4 71.5 0.7
CHB M:BCB404 3.4 60.8 0.3
CHB M:BCB404 3.4 60.8 0.7
CHC M:BCB404 3.4 69.9 0.7
CAB L:BCB301 3.4 65.1 0.3
CBB L:BCB301 3.5 69.7 0.3
CAB L:BCB301 3.6 65.1 0.7
OBB L:BCB301 3.6 74.0 0.3
CHD M:BCB404 3.6 72.4 0.7
CHA M:BCB404 3.6 71.5 0.3
CHD M:BCB404 3.6 72.4 0.3
OBB L:BCB301 3.8 74.0 0.7
C3B L:BCB301 4.1 67.9 0.3
ND1 M:HIS200 4.1 81.8 0.3
C3B M:BCB404 4.2 72.1 0.3
ND1 M:HIS200 4.2 81.8 0.7
CG M:HIS200 4.2 76.3 0.3
C3C M:BCB404 4.2 73.6 0.3
C2C M:BCB404 4.2 76.0 0.3
C2B M:BCB404 4.3 67.8 0.3
C3B L:BCB301 4.3 67.9 0.7
C3D M:BCB404 4.3 71.7 0.7
C3A M:BCB404 4.3 73.1 0.7
C2A M:BCB404 4.3 73.8 0.7
CG M:HIS200 4.3 76.3 0.7
C3C M:BCB404 4.3 73.6 0.7
C2D M:BCB404 4.3 71.6 0.7
C3B M:BCB404 4.4 72.1 0.7
C2B M:BCB404 4.4 67.8 0.7
C2C M:BCB404 4.5 76.0 0.7
C3A M:BCB404 4.5 73.1 0.3
C3D M:BCB404 4.5 71.7 0.3
C2A M:BCB404 4.5 73.8 0.3
C2D M:BCB404 4.5 71.6 0.3
CMC M:BCB404 4.7 78.8 0.3
C2B L:BCB301 4.8 73.3 0.3
CBD M:BCB404 4.8 75.7 0.7
CD1 M:ILE204 4.8 76.7 0.3
C4B L:BCB301 4.8 69.0 0.3
CD1 M:ILE204 4.9 76.7 0.7
CMC M:BCB404 4.9 78.8 0.7

Magnesium binding site 7 out of 7 in 6zi5

Go back to Magnesium Binding Sites List in 6zi5
Magnesium binding site 7 out of 7 in the Ultrafast Structural Response to Charge Redistribution Within A Photosynthetic Reaction Centre - 300 Ps (A) Structure


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 7 of Ultrafast Structural Response to Charge Redistribution Within A Photosynthetic Reaction Centre - 300 Ps (A) Structure within 5.0Å range:
probe atom residue distance (Å) B Occ
M:Mg404

b:71.2
occ:0.30
MG M:BCB404 0.0 71.2 0.3
MG M:BCB404 0.3 71.2 0.7
ND M:BCB404 1.8 68.9 0.7
NA M:BCB404 1.8 73.2 0.7
NA M:BCB404 2.0 73.2 0.3
ND M:BCB404 2.0 68.9 0.3
NC M:BCB404 2.1 65.7 0.3
NB M:BCB404 2.1 68.6 0.3
NC M:BCB404 2.2 65.7 0.7
NB M:BCB404 2.3 68.6 0.7
NE2 M:HIS200 2.3 77.7 0.3
NE2 M:HIS200 2.4 77.7 0.7
C4D M:BCB404 2.8 72.2 0.7
C1A M:BCB404 2.8 74.7 0.7
C4A M:BCB404 2.9 71.8 0.7
C1A M:BCB404 3.0 74.7 0.3
C4A M:BCB404 3.0 71.8 0.3
C1D M:BCB404 3.0 72.3 0.7
C4D M:BCB404 3.0 72.2 0.3
C1B M:BCB404 3.1 66.2 0.3
C4B M:BCB404 3.1 69.7 0.3
C1C M:BCB404 3.1 70.9 0.3
C4C M:BCB404 3.1 70.0 0.3
CHA M:BCB404 3.1 71.5 0.7
CBB L:BCB301 3.1 69.7 0.7
C1D M:BCB404 3.1 72.3 0.3
C4C M:BCB404 3.2 70.0 0.7
C1B M:BCB404 3.2 66.2 0.7
CE1 M:HIS200 3.2 84.8 0.3
CD2 M:HIS200 3.3 79.3 0.3
CBB L:BCB301 3.3 69.7 0.3
CE1 M:HIS200 3.3 84.8 0.7
C4B M:BCB404 3.3 69.7 0.7
C1C M:BCB404 3.3 70.9 0.7
CAB L:BCB301 3.3 65.1 0.3
CD2 M:HIS200 3.3 79.3 0.7
CHA M:BCB404 3.4 71.5 0.3
CHB M:BCB404 3.4 60.8 0.3
CHB M:BCB404 3.4 60.8 0.7
CHC M:BCB404 3.4 69.9 0.3
CAB L:BCB301 3.5 65.1 0.7
OBB L:BCB301 3.5 74.0 0.3
CHD M:BCB404 3.6 72.4 0.7
CHD M:BCB404 3.6 72.4 0.3
CHC M:BCB404 3.7 69.9 0.7
OBB L:BCB301 3.7 74.0 0.7
C3B L:BCB301 4.1 67.9 0.3
C3D M:BCB404 4.1 71.7 0.7
C2A M:BCB404 4.1 73.8 0.7
C3A M:BCB404 4.2 73.1 0.7
C2D M:BCB404 4.2 71.6 0.7
C3B L:BCB301 4.3 67.9 0.7
C3D M:BCB404 4.3 71.7 0.3
C3A M:BCB404 4.3 73.1 0.3
C2A M:BCB404 4.3 73.8 0.3
C3C M:BCB404 4.3 73.6 0.3
ND1 M:HIS200 4.4 81.8 0.3
C2D M:BCB404 4.4 71.6 0.3
CG M:HIS200 4.4 76.3 0.3
C3B M:BCB404 4.4 72.1 0.3
C2B M:BCB404 4.4 67.8 0.3
ND1 M:HIS200 4.4 81.8 0.7
C2C M:BCB404 4.5 76.0 0.3
C3C M:BCB404 4.5 73.6 0.7
CG M:HIS200 4.5 76.3 0.7
C2B M:BCB404 4.6 67.8 0.7
CBD M:BCB404 4.6 75.7 0.7
C3B M:BCB404 4.6 72.1 0.7
C2C M:BCB404 4.7 76.0 0.7
C2B L:BCB301 4.7 73.3 0.3
CBD M:BCB404 4.8 75.7 0.3
C4B L:BCB301 4.9 69.0 0.3
CAD M:BCB404 4.9 72.5 0.7
CMC M:BCB404 4.9 78.8 0.3

Reference:

R.Dods, P.Baath, D.Morozov, V.A.Gagner, A.Arnlund, H.L.Luk, J.Kuebel, M.Maj, A.Vallejos, C.Wickstrand, R.Bosman, K.R.Beyerlein, G.Nelson, M.Liang, D.Milathianaki, J.Robinson, R.Harimoorthy, P.Berntsen, E.Malmerberg, L.Johansson, R.Andersson, S.Carbajo, E.Claesson, C.E.Conrad, P.Dahl, G.Hammarin, M.S.Hunter, C.Li, S.Lisova, A.Royant, C.Safari, A.Sharma, G.J.Williams, O.Yefanov, S.Westenhoff, J.Davidsson, D.P.Deponte, S.Boutet, A.Barty, G.Katona, G.Groenhof, G.Braenden, R.Neutze. Ultrafast Structural Changes Within A Photosynthetic Reaction Centre Nature 2020.
ISSN: ESSN 1476-4687
DOI: 10.1038/S41586-020-3000-7
Page generated: Wed Oct 2 02:19:20 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy