Magnesium in PDB 6zi9: Ultrafast Structural Response to Charge Redistribution Within A Photosynthetic Reaction Centre - 300 Ps (B) Structure

Protein crystallography data

The structure of Ultrafast Structural Response to Charge Redistribution Within A Photosynthetic Reaction Centre - 300 Ps (B) Structure, PDB code: 6zi9 was solved by P.Baath, R.Dods, G.Braenden, R.Neutze, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 34.31 / 2.80
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 226.500, 226.500, 113.900, 90.00, 90.00, 90.00
R / Rfree (%) 16.6 / 19

Other elements in 6zi9:

The structure of Ultrafast Structural Response to Charge Redistribution Within A Photosynthetic Reaction Centre - 300 Ps (B) Structure also contains other interesting chemical elements:

Iron (Fe) 6 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Ultrafast Structural Response to Charge Redistribution Within A Photosynthetic Reaction Centre - 300 Ps (B) Structure (pdb code 6zi9). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 7 binding sites of Magnesium where determined in the Ultrafast Structural Response to Charge Redistribution Within A Photosynthetic Reaction Centre - 300 Ps (B) Structure, PDB code: 6zi9:
Jump to Magnesium binding site number: 1; 2; 3; 4; 5; 6; 7;

Magnesium binding site 1 out of 7 in 6zi9

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Magnesium binding site 1 out of 7 in the Ultrafast Structural Response to Charge Redistribution Within A Photosynthetic Reaction Centre - 300 Ps (B) Structure


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Ultrafast Structural Response to Charge Redistribution Within A Photosynthetic Reaction Centre - 300 Ps (B) Structure within 5.0Å range:
probe atom residue distance (Å) B Occ
L:Mg301

b:62.5
occ:0.70
MG L:BCB301 0.0 62.5 0.7
MG L:BCB301 0.2 62.5 0.3
NA L:BCB301 1.9 58.4 0.3
ND L:BCB301 2.0 56.7 0.3
NA L:BCB301 2.0 58.4 0.7
ND L:BCB301 2.0 56.7 0.7
NB L:BCB301 2.0 60.0 0.7
NC L:BCB301 2.1 60.0 0.7
NE2 L:HIS173 2.1 62.9 0.7
NB L:BCB301 2.1 60.0 0.3
NC L:BCB301 2.2 60.0 0.3
NE2 L:HIS173 2.4 62.9 0.3
C1A L:BCB301 2.8 58.4 0.3
C4D L:BCB301 2.9 56.6 0.3
C4A L:BCB301 2.9 58.9 0.3
C4D L:BCB301 3.0 56.6 0.7
C1A L:BCB301 3.0 58.4 0.7
C4A L:BCB301 3.0 58.9 0.7
C1B L:BCB301 3.1 59.6 0.7
CE1 L:HIS173 3.1 62.8 0.7
C4B L:BCB301 3.1 57.0 0.7
C1B L:BCB301 3.1 59.6 0.3
C1D L:BCB301 3.1 60.8 0.7
C1D L:BCB301 3.1 60.8 0.3
C4C L:BCB301 3.1 59.0 0.7
C1C L:BCB301 3.1 59.7 0.7
CD2 L:HIS173 3.1 61.1 0.7
C4B L:BCB301 3.2 57.0 0.3
C4C L:BCB301 3.2 59.0 0.3
CHA L:BCB301 3.2 59.1 0.3
CD2 L:HIS173 3.2 61.1 0.3
C1C L:BCB301 3.3 59.7 0.3
CHB L:BCB301 3.3 59.7 0.3
CE1 L:HIS173 3.4 62.8 0.3
CHB L:BCB301 3.4 59.7 0.7
CBB M:BCB403 3.4 59.2 0.7
CHA L:BCB301 3.4 59.1 0.7
CHC L:BCB301 3.5 55.7 0.7
OBB M:BCB403 3.5 59.6 0.3
CHD L:BCB301 3.6 58.5 0.7
CAB M:BCB403 3.6 56.5 0.7
CAB M:BCB403 3.6 56.5 0.3
CHC L:BCB301 3.6 55.7 0.3
CHD L:BCB301 3.6 58.5 0.3
CBB M:BCB403 3.7 59.2 0.3
OBB M:BCB403 3.9 59.6 0.7
C2A L:BCB301 4.2 58.4 0.3
CD1 L:TRP167 4.2 61.3 0.3
C3D L:BCB301 4.2 59.0 0.3
ND1 L:HIS173 4.2 59.9 0.7
C3A L:BCB301 4.2 58.0 0.3
CG L:HIS173 4.3 63.0 0.7
C3D L:BCB301 4.3 59.0 0.7
NE1 L:TRP167 4.3 61.4 0.3
C2D L:BCB301 4.3 59.2 0.3
C3B M:BCB403 4.3 57.4 0.7
CD1 L:TRP167 4.3 61.3 0.7
C3A L:BCB301 4.3 58.0 0.7
C2D L:BCB301 4.3 59.2 0.7
C2A L:BCB301 4.3 58.4 0.7
C3C L:BCB301 4.4 57.4 0.7
NE1 L:TRP167 4.4 61.4 0.7
C3B L:BCB301 4.4 58.6 0.7
C2B L:BCB301 4.4 59.5 0.7
C3B M:BCB403 4.4 57.4 0.3
CG L:HIS173 4.4 63.0 0.3
ND1 L:HIS173 4.4 59.9 0.3
C2B L:BCB301 4.4 59.5 0.3
C3C L:BCB301 4.5 57.4 0.3
C3B L:BCB301 4.5 58.6 0.3
C2C L:BCB301 4.5 61.4 0.7
C2C L:BCB301 4.7 61.4 0.3
CBD L:BCB301 4.7 59.8 0.3
CBD L:BCB301 4.9 59.8 0.7

Magnesium binding site 2 out of 7 in 6zi9

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Magnesium binding site 2 out of 7 in the Ultrafast Structural Response to Charge Redistribution Within A Photosynthetic Reaction Centre - 300 Ps (B) Structure


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Ultrafast Structural Response to Charge Redistribution Within A Photosynthetic Reaction Centre - 300 Ps (B) Structure within 5.0Å range:
probe atom residue distance (Å) B Occ
L:Mg301

b:62.5
occ:0.30
MG L:BCB301 0.0 62.5 0.3
MG L:BCB301 0.2 62.5 0.7
NC L:BCB301 1.9 60.0 0.7
NB L:BCB301 2.0 60.0 0.7
NA L:BCB301 2.0 58.4 0.3
ND L:BCB301 2.0 56.7 0.3
NB L:BCB301 2.0 60.0 0.3
NC L:BCB301 2.1 60.0 0.3
ND L:BCB301 2.1 56.7 0.7
NA L:BCB301 2.2 58.4 0.7
NE2 L:HIS173 2.2 62.9 0.7
NE2 L:HIS173 2.4 62.9 0.3
C4B L:BCB301 3.0 57.0 0.7
C1C L:BCB301 3.0 59.7 0.7
C1A L:BCB301 3.0 58.4 0.3
C4A L:BCB301 3.0 58.9 0.3
C4C L:BCB301 3.0 59.0 0.7
C4D L:BCB301 3.0 56.6 0.3
C1B L:BCB301 3.0 59.6 0.7
C1B L:BCB301 3.0 59.6 0.3
C4B L:BCB301 3.1 57.0 0.3
CE1 L:HIS173 3.1 62.8 0.7
C4A L:BCB301 3.1 58.9 0.7
C4C L:BCB301 3.1 59.0 0.3
C1C L:BCB301 3.1 59.7 0.3
C4D L:BCB301 3.1 56.6 0.7
C1D L:BCB301 3.1 60.8 0.7
C1D L:BCB301 3.1 60.8 0.3
C1A L:BCB301 3.2 58.4 0.7
CD2 L:HIS173 3.3 61.1 0.7
CHC L:BCB301 3.3 55.7 0.7
CBB M:BCB403 3.3 59.2 0.7
CHB L:BCB301 3.4 59.7 0.3
CE1 L:HIS173 3.4 62.8 0.3
CD2 L:HIS173 3.4 61.1 0.3
OBB M:BCB403 3.4 59.6 0.3
CHA L:BCB301 3.4 59.1 0.3
CHB L:BCB301 3.4 59.7 0.7
CHC L:BCB301 3.5 55.7 0.3
CAB M:BCB403 3.5 56.5 0.7
CAB M:BCB403 3.5 56.5 0.3
CHD L:BCB301 3.5 58.5 0.7
CHD L:BCB301 3.6 58.5 0.3
CHA L:BCB301 3.6 59.1 0.7
CBB M:BCB403 3.7 59.2 0.3
OBB M:BCB403 3.7 59.6 0.7
C3B M:BCB403 4.2 57.4 0.7
CD1 L:TRP167 4.2 61.3 0.3
C3C L:BCB301 4.2 57.4 0.7
ND1 L:HIS173 4.3 59.9 0.7
C3B M:BCB403 4.3 57.4 0.3
C3B L:BCB301 4.3 58.6 0.7
C3D L:BCB301 4.3 59.0 0.3
C2A L:BCB301 4.3 58.4 0.3
C3A L:BCB301 4.3 58.0 0.3
C2B L:BCB301 4.3 59.5 0.7
C3C L:BCB301 4.3 57.4 0.3
C2D L:BCB301 4.4 59.2 0.3
C2C L:BCB301 4.4 61.4 0.7
CD1 L:TRP167 4.4 61.3 0.7
NE1 L:TRP167 4.4 61.4 0.3
C2B L:BCB301 4.4 59.5 0.3
CG L:HIS173 4.4 63.0 0.7
C3D L:BCB301 4.4 59.0 0.7
C2D L:BCB301 4.4 59.2 0.7
C3B L:BCB301 4.4 58.6 0.3
NE1 L:TRP167 4.5 61.4 0.7
C3A L:BCB301 4.5 58.0 0.7
ND1 L:HIS173 4.5 59.9 0.3
C2A L:BCB301 4.5 58.4 0.7
CG L:HIS173 4.5 63.0 0.3
C2C L:BCB301 4.5 61.4 0.3
CBD L:BCB301 4.9 59.8 0.3
C2B M:BCB403 4.9 55.8 0.7
C4B M:BCB403 4.9 54.4 0.7
C4B M:BCB403 5.0 54.4 0.3

Magnesium binding site 3 out of 7 in 6zi9

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Magnesium binding site 3 out of 7 in the Ultrafast Structural Response to Charge Redistribution Within A Photosynthetic Reaction Centre - 300 Ps (B) Structure


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of Ultrafast Structural Response to Charge Redistribution Within A Photosynthetic Reaction Centre - 300 Ps (B) Structure within 5.0Å range:
probe atom residue distance (Å) B Occ
L:Mg302

b:63.9
occ:0.70
MG L:BCB302 0.0 63.9 0.7
MG L:BCB302 0.0 63.9 0.3
NA L:BCB302 2.0 66.4 0.3
NA L:BCB302 2.0 66.4 0.7
ND L:BCB302 2.0 64.7 0.3
ND L:BCB302 2.0 64.7 0.7
NB L:BCB302 2.1 65.0 0.7
NC L:BCB302 2.1 64.6 0.3
NC L:BCB302 2.1 64.6 0.7
NB L:BCB302 2.1 65.0 0.3
NE2 L:HIS153 2.2 66.2 0.3
NE2 L:HIS153 2.2 66.2 0.7
C1A L:BCB302 3.0 65.8 0.3
C1A L:BCB302 3.0 65.8 0.7
C4D L:BCB302 3.0 65.5 0.3
C4D L:BCB302 3.0 65.5 0.7
C4A L:BCB302 3.0 64.1 0.3
C4A L:BCB302 3.0 64.1 0.7
C1B L:BCB302 3.1 61.0 0.7
C4B L:BCB302 3.1 60.8 0.7
C1D L:BCB302 3.1 65.3 0.3
C1B L:BCB302 3.1 61.0 0.3
C1D L:BCB302 3.1 65.3 0.7
C4C L:BCB302 3.1 63.7 0.3
C1C L:BCB302 3.1 60.5 0.7
C4B L:BCB302 3.1 60.8 0.3
C4C L:BCB302 3.1 63.7 0.7
C1C L:BCB302 3.1 60.5 0.3
CE1 L:HIS153 3.1 66.3 0.3
CD2 L:HIS153 3.2 67.8 0.3
CE1 L:HIS153 3.2 66.3 0.7
CD2 L:HIS153 3.2 67.8 0.7
CHA L:BCB302 3.4 63.7 0.3
CHA L:BCB302 3.4 63.7 0.7
CHB L:BCB302 3.4 64.0 0.3
CHB L:BCB302 3.4 64.0 0.7
CHC L:BCB302 3.5 60.8 0.7
CHC L:BCB302 3.5 60.8 0.3
CHD L:BCB302 3.6 63.9 0.3
CHD L:BCB302 3.6 63.9 0.7
CBB L:BPB303 4.1 67.6 0.7
CBB L:BPB303 4.1 67.6 0.3
C3D L:BCB302 4.2 66.0 0.3
ND1 L:HIS153 4.3 64.4 0.3
C3D L:BCB302 4.3 66.0 0.7
C2D L:BCB302 4.3 63.1 0.3
C2A L:BCB302 4.3 66.2 0.3
C2A L:BCB302 4.3 66.2 0.7
C3A L:BCB302 4.3 66.6 0.3
CG L:HIS153 4.3 64.6 0.3
C2D L:BCB302 4.3 63.1 0.7
C3A L:BCB302 4.3 66.6 0.7
ND1 L:HIS153 4.3 64.4 0.7
C3C L:BCB302 4.4 64.5 0.3
C3C L:BCB302 4.4 64.5 0.7
CG L:HIS153 4.4 64.6 0.7
C3B L:BCB302 4.4 62.8 0.7
C2B L:BCB302 4.4 62.8 0.7
C3B L:BCB302 4.4 62.8 0.3
C2B L:BCB302 4.4 62.8 0.3
C2C L:BCB302 4.5 63.4 0.3
C2C L:BCB302 4.5 63.4 0.7
CE2 M:TYR208 4.5 63.8 0.7
CE2 M:TYR208 4.6 63.8 0.3
CBD L:BCB302 4.8 64.6 0.3
CBD L:BCB302 4.8 64.6 0.7
CD2 L:LEU154 4.9 66.8 0.7
CBA L:BCB302 4.9 64.9 0.7
CMC L:BCB302 5.0 63.2 0.3

Magnesium binding site 4 out of 7 in 6zi9

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Magnesium binding site 4 out of 7 in the Ultrafast Structural Response to Charge Redistribution Within A Photosynthetic Reaction Centre - 300 Ps (B) Structure


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 4 of Ultrafast Structural Response to Charge Redistribution Within A Photosynthetic Reaction Centre - 300 Ps (B) Structure within 5.0Å range:
probe atom residue distance (Å) B Occ
L:Mg302

b:63.9
occ:0.30
MG L:BCB302 0.0 63.9 0.3
MG L:BCB302 0.0 63.9 0.7
NA L:BCB302 2.0 66.4 0.3
NA L:BCB302 2.0 66.4 0.7
NB L:BCB302 2.0 65.0 0.7
ND L:BCB302 2.0 64.7 0.3
NB L:BCB302 2.1 65.0 0.3
ND L:BCB302 2.1 64.7 0.7
NC L:BCB302 2.1 64.6 0.3
NC L:BCB302 2.1 64.6 0.7
NE2 L:HIS153 2.2 66.2 0.3
NE2 L:HIS153 2.3 66.2 0.7
C1A L:BCB302 3.0 65.8 0.3
C1A L:BCB302 3.0 65.8 0.7
C4D L:BCB302 3.0 65.5 0.3
C4A L:BCB302 3.0 64.1 0.3
C4A L:BCB302 3.0 64.1 0.7
C4D L:BCB302 3.0 65.5 0.7
C1B L:BCB302 3.1 61.0 0.7
C4B L:BCB302 3.1 60.8 0.7
C1B L:BCB302 3.1 61.0 0.3
C4B L:BCB302 3.1 60.8 0.3
C1C L:BCB302 3.1 60.5 0.7
C1D L:BCB302 3.1 65.3 0.3
C1C L:BCB302 3.1 60.5 0.3
C4C L:BCB302 3.1 63.7 0.3
C4C L:BCB302 3.1 63.7 0.7
C1D L:BCB302 3.1 65.3 0.7
CE1 L:HIS153 3.2 66.3 0.3
CD2 L:HIS153 3.2 67.8 0.3
CD2 L:HIS153 3.2 67.8 0.7
CE1 L:HIS153 3.2 66.3 0.7
CHA L:BCB302 3.4 63.7 0.3
CHB L:BCB302 3.4 64.0 0.3
CHB L:BCB302 3.4 64.0 0.7
CHA L:BCB302 3.4 63.7 0.7
CHC L:BCB302 3.4 60.8 0.7
CHC L:BCB302 3.5 60.8 0.3
CHD L:BCB302 3.6 63.9 0.3
CHD L:BCB302 3.6 63.9 0.7
CBB L:BPB303 4.1 67.6 0.7
CBB L:BPB303 4.1 67.6 0.3
C3D L:BCB302 4.3 66.0 0.3
ND1 L:HIS153 4.3 64.4 0.3
C3D L:BCB302 4.3 66.0 0.7
C2A L:BCB302 4.3 66.2 0.3
C2A L:BCB302 4.3 66.2 0.7
C3A L:BCB302 4.3 66.6 0.3
C2D L:BCB302 4.3 63.1 0.3
C3A L:BCB302 4.3 66.6 0.7
CG L:HIS153 4.3 64.6 0.3
C2D L:BCB302 4.4 63.1 0.7
C3C L:BCB302 4.4 64.5 0.3
ND1 L:HIS153 4.4 64.4 0.7
C3C L:BCB302 4.4 64.5 0.7
C3B L:BCB302 4.4 62.8 0.7
C2B L:BCB302 4.4 62.8 0.7
CG L:HIS153 4.4 64.6 0.7
C3B L:BCB302 4.4 62.8 0.3
C2B L:BCB302 4.4 62.8 0.3
C2C L:BCB302 4.5 63.4 0.3
C2C L:BCB302 4.5 63.4 0.7
CE2 M:TYR208 4.5 63.8 0.7
CE2 M:TYR208 4.6 63.8 0.3
CBD L:BCB302 4.8 64.6 0.3
CBD L:BCB302 4.8 64.6 0.7
CBA L:BCB302 4.9 64.9 0.7
CD2 L:LEU154 4.9 66.8 0.7
CMC L:BCB302 5.0 63.2 0.3

Magnesium binding site 5 out of 7 in 6zi9

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Magnesium binding site 5 out of 7 in the Ultrafast Structural Response to Charge Redistribution Within A Photosynthetic Reaction Centre - 300 Ps (B) Structure


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 5 of Ultrafast Structural Response to Charge Redistribution Within A Photosynthetic Reaction Centre - 300 Ps (B) Structure within 5.0Å range:
probe atom residue distance (Å) B Occ
L:Mg304

b:69.4
occ:1.00
MG L:BCB304 0.0 69.4 1.0
NA L:BCB304 2.0 69.3 1.0
ND L:BCB304 2.0 65.3 1.0
NB L:BCB304 2.0 70.4 1.0
NC L:BCB304 2.1 72.2 1.0
NE2 M:HIS180 2.1 65.3 1.0
C1A L:BCB304 3.0 65.6 1.0
C4A L:BCB304 3.0 69.8 1.0
C4D L:BCB304 3.0 64.3 1.0
C1B L:BCB304 3.1 70.0 1.0
CE1 M:HIS180 3.1 66.8 1.0
C4B L:BCB304 3.1 69.6 1.0
C4C L:BCB304 3.1 67.4 1.0
C1D L:BCB304 3.1 69.8 1.0
C1C L:BCB304 3.1 65.0 1.0
CD2 M:HIS180 3.2 66.2 1.0
CHB L:BCB304 3.4 67.9 1.0
CHA L:BCB304 3.4 66.1 1.0
CHC L:BCB304 3.5 69.6 1.0
CHD L:BCB304 3.6 68.1 1.0
ND1 M:HIS180 4.2 64.6 1.0
C3D L:BCB304 4.3 66.7 1.0
CG M:HIS180 4.3 65.6 1.0
C2A L:BCB304 4.3 68.4 1.0
C3C L:BCB304 4.3 66.4 1.0
C3A L:BCB304 4.3 68.6 1.0
C2D L:BCB304 4.4 67.8 1.0
C3B L:BCB304 4.4 72.4 1.0
OBB M:BPB404 4.4 86.1 1.0
C2B L:BCB304 4.4 70.3 1.0
C2C L:BCB304 4.5 64.0 1.0
CE2 L:PHE181 4.8 67.4 1.0
CBA L:BCB304 4.8 77.0 1.0
CBD L:BCB304 4.9 68.5 1.0

Magnesium binding site 6 out of 7 in 6zi9

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Magnesium binding site 6 out of 7 in the Ultrafast Structural Response to Charge Redistribution Within A Photosynthetic Reaction Centre - 300 Ps (B) Structure


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 6 of Ultrafast Structural Response to Charge Redistribution Within A Photosynthetic Reaction Centre - 300 Ps (B) Structure within 5.0Å range:
probe atom residue distance (Å) B Occ
M:Mg403

b:61.4
occ:0.70
MG M:BCB403 0.0 61.4 0.7
MG M:BCB403 0.3 61.4 0.3
NC M:BCB403 2.0 58.2 0.3
NB M:BCB403 2.0 55.5 0.3
NA M:BCB403 2.0 62.3 0.7
ND M:BCB403 2.0 57.9 0.7
NC M:BCB403 2.0 58.2 0.7
NB M:BCB403 2.0 55.5 0.7
NE2 M:HIS200 2.1 65.7 0.3
NE2 M:HIS200 2.1 65.7 0.7
ND M:BCB403 2.1 57.9 0.3
NA M:BCB403 2.1 62.3 0.3
CE1 M:HIS200 3.0 68.3 0.3
C1C M:BCB403 3.0 55.0 0.3
C4B M:BCB403 3.0 54.4 0.3
CE1 M:HIS200 3.0 68.3 0.7
C4D M:BCB403 3.0 59.9 0.7
C1A M:BCB403 3.0 61.0 0.7
C4A M:BCB403 3.0 59.0 0.7
C4C M:BCB403 3.0 58.0 0.3
C1B M:BCB403 3.1 54.5 0.3
C1B M:BCB403 3.1 54.5 0.7
C4B M:BCB403 3.1 54.4 0.7
C1C M:BCB403 3.1 55.0 0.7
C1A M:BCB403 3.1 61.0 0.3
C4C M:BCB403 3.1 58.0 0.7
C4A M:BCB403 3.1 59.0 0.3
C4D M:BCB403 3.1 59.9 0.3
C1D M:BCB403 3.1 63.2 0.7
CD2 M:HIS200 3.1 65.0 0.3
C1D M:BCB403 3.2 63.2 0.3
CD2 M:HIS200 3.2 65.0 0.7
CHC M:BCB403 3.3 54.7 0.3
CHA M:BCB403 3.4 60.2 0.7
CHB M:BCB403 3.4 56.1 0.7
CBB L:BCB301 3.4 61.1 0.7
CHB M:BCB403 3.4 56.1 0.3
CBB L:BCB301 3.4 61.1 0.3
CHC M:BCB403 3.4 54.7 0.7
CHA M:BCB403 3.5 60.2 0.3
CAB L:BCB301 3.5 59.2 0.3
CHD M:BCB403 3.6 61.5 0.3
CHD M:BCB403 3.6 61.5 0.7
CAB L:BCB301 3.6 59.2 0.7
OBB L:BCB301 3.7 62.6 0.3
OBB L:BCB301 3.8 62.6 0.7
ND1 M:HIS200 4.1 61.4 0.3
ND1 M:HIS200 4.1 61.4 0.7
C3B L:BCB301 4.2 58.6 0.3
CG M:HIS200 4.2 62.0 0.3
C3C M:BCB403 4.3 60.2 0.3
C3D M:BCB403 4.3 61.2 0.7
CG M:HIS200 4.3 62.0 0.7
C3B M:BCB403 4.3 57.4 0.3
C3C M:BCB403 4.3 60.2 0.7
C2C M:BCB403 4.3 60.0 0.3
C2D M:BCB403 4.3 60.6 0.7
C2A M:BCB403 4.3 63.8 0.7
C3B L:BCB301 4.3 58.6 0.7
C3A M:BCB403 4.4 62.5 0.7
C2B M:BCB403 4.4 55.8 0.3
C3D M:BCB403 4.4 61.2 0.3
C3B M:BCB403 4.4 57.4 0.7
C2B M:BCB403 4.4 55.8 0.7
C2D M:BCB403 4.4 60.6 0.3
C2C M:BCB403 4.4 60.0 0.7
C3A M:BCB403 4.4 62.5 0.3
C2A M:BCB403 4.4 63.8 0.3
CMC M:BCB403 4.8 62.3 0.3
CBD M:BCB403 4.8 65.1 0.7
CMC M:BCB403 4.8 62.3 0.7
CBD M:BCB403 4.9 65.1 0.3
CD1 M:ILE204 4.9 64.6 0.7
CD2 M:PHE194 4.9 64.1 0.3
C4B L:BCB301 5.0 57.0 0.3
C2B L:BCB301 5.0 59.5 0.3

Magnesium binding site 7 out of 7 in 6zi9

Go back to Magnesium Binding Sites List in 6zi9
Magnesium binding site 7 out of 7 in the Ultrafast Structural Response to Charge Redistribution Within A Photosynthetic Reaction Centre - 300 Ps (B) Structure


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 7 of Ultrafast Structural Response to Charge Redistribution Within A Photosynthetic Reaction Centre - 300 Ps (B) Structure within 5.0Å range:
probe atom residue distance (Å) B Occ
M:Mg403

b:61.4
occ:0.30
MG M:BCB403 0.0 61.4 0.3
MG M:BCB403 0.3 61.4 0.7
NA M:BCB403 1.9 62.3 0.7
ND M:BCB403 1.9 57.9 0.7
NA M:BCB403 2.0 62.3 0.3
ND M:BCB403 2.0 57.9 0.3
NC M:BCB403 2.0 58.2 0.3
NB M:BCB403 2.1 55.5 0.3
NB M:BCB403 2.1 55.5 0.7
NC M:BCB403 2.1 58.2 0.7
NE2 M:HIS200 2.3 65.7 0.3
NE2 M:HIS200 2.3 65.7 0.7
C1A M:BCB403 2.9 61.0 0.7
C4D M:BCB403 2.9 59.9 0.7
C4A M:BCB403 2.9 59.0 0.7
C1A M:BCB403 3.0 61.0 0.3
C4D M:BCB403 3.0 59.9 0.3
C4A M:BCB403 3.0 59.0 0.3
C1B M:BCB403 3.1 54.5 0.3
C1D M:BCB403 3.1 63.2 0.7
C4B M:BCB403 3.1 54.4 0.3
C1B M:BCB403 3.1 54.5 0.7
C1C M:BCB403 3.1 55.0 0.3
C4C M:BCB403 3.1 58.0 0.3
C1D M:BCB403 3.1 63.2 0.3
C4C M:BCB403 3.2 58.0 0.7
CBB L:BCB301 3.2 61.1 0.7
C4B M:BCB403 3.2 54.4 0.7
CE1 M:HIS200 3.2 68.3 0.3
CBB L:BCB301 3.2 61.1 0.3
CE1 M:HIS200 3.2 68.3 0.7
C1C M:BCB403 3.2 55.0 0.7
CHA M:BCB403 3.2 60.2 0.7
CD2 M:HIS200 3.3 65.0 0.3
CD2 M:HIS200 3.3 65.0 0.7
CHB M:BCB403 3.3 56.1 0.7
CAB L:BCB301 3.4 59.2 0.3
CHA M:BCB403 3.4 60.2 0.3
CHB M:BCB403 3.4 56.1 0.3
CHC M:BCB403 3.4 54.7 0.3
CAB L:BCB301 3.5 59.2 0.7
OBB L:BCB301 3.5 62.6 0.3
CHD M:BCB403 3.6 61.5 0.3
CHD M:BCB403 3.6 61.5 0.7
CHC M:BCB403 3.6 54.7 0.7
OBB L:BCB301 3.7 62.6 0.7
C3B L:BCB301 4.1 58.6 0.3
C3D M:BCB403 4.2 61.2 0.7
C2A M:BCB403 4.2 63.8 0.7
C3A M:BCB403 4.2 62.5 0.7
C3B L:BCB301 4.2 58.6 0.7
C2D M:BCB403 4.3 60.6 0.7
C3D M:BCB403 4.3 61.2 0.3
C3A M:BCB403 4.3 62.5 0.3
C2A M:BCB403 4.3 63.8 0.3
C3C M:BCB403 4.3 60.2 0.3
C2D M:BCB403 4.3 60.6 0.3
ND1 M:HIS200 4.3 61.4 0.3
ND1 M:HIS200 4.4 61.4 0.7
C3B M:BCB403 4.4 57.4 0.3
C2B M:BCB403 4.4 55.8 0.3
C3C M:BCB403 4.4 60.2 0.7
CG M:HIS200 4.4 62.0 0.3
C2B M:BCB403 4.4 55.8 0.7
C2C M:BCB403 4.5 60.0 0.3
CG M:HIS200 4.5 62.0 0.7
C3B M:BCB403 4.5 57.4 0.7
C2C M:BCB403 4.6 60.0 0.7
CBD M:BCB403 4.7 65.1 0.7
CBD M:BCB403 4.8 65.1 0.3
C2B L:BCB301 4.9 59.5 0.3
C4B L:BCB301 4.9 57.0 0.3
CMC M:BCB403 5.0 62.3 0.3

Reference:

R.Dods, P.Baath, D.Morozov, V.A.Gagner, A.Arnlund, H.L.Luk, J.Kuebel, M.Maj, A.Vallejos, C.Wickstrand, R.Bosman, K.R.Beyerlein, G.Nelson, M.Liang, D.Milathianaki, J.Robinson, R.Harimoorthy, P.Berntsen, E.Malmerberg, L.Johansson, R.Andersson, S.Carbajo, E.Claesson, C.E.Conrad, P.Dahl, G.Hammarin, M.S.Hunter, C.Li, S.Lisova, A.Royant, C.Safari, A.Sharma, G.J.Williams, O.Yefanov, S.Westenhoff, J.Davidsson, D.P.Deponte, S.Boutet, A.Barty, G.Katona, G.Groenhof, G.Braenden, R.Neutze. Ultrafast Structural Changes Within A Photosynthetic Reaction Centre Nature 2020.
ISSN: ESSN 1476-4687
DOI: 10.1038/S41586-020-3000-7
Page generated: Tue Dec 15 02:58:30 2020

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